RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 LOC107984640A0A0U1RRK4 108 aa12.11□□□□□ -0.47
CAPN1-211ENST00000527739 SPAG11BQ08648 103 aa12.11□□□□□ -0.47
CAPN1-211ENST00000527739 PLA2G2DQ9UNK4 145 aa12.11□□□□□ -0.47
CAPN1-211ENST00000527739 IFI27P40305 119 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-211ENST00000527739 MRPS36P82909 103 aaKnown RBP12.09□□□□□ -0.47
CAPN1-211ENST00000527739 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
CAPN1-211ENST00000527739 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
CAPN1-211ENST00000527739 MAP1LC3AQ9H492 121 aa12.09□□□□□ -0.47
CAPN1-211ENST00000527739 PTTG1IPP53801 180 aa12.08□□□□□ -0.48
CAPN1-211ENST00000527739 ORAOV1Q8WV07 137 aa12.08□□□□□ -0.48
CAPN1-211ENST00000527739 A0A0J9YXV3 536 aa12.07□□□□□ -0.48
CAPN1-211ENST00000527739 RPL18AQ02543 176 aaKnown RBP12.07□□□□□ -0.48
CAPN1-211ENST00000527739 CLLU1Q5K131 121 aa12.07□□□□□ -0.48
CAPN1-211ENST00000527739 LAMTOR2Q9Y2Q5 125 aa12.07□□□□□ -0.48
CAPN1-211ENST00000527739 PRR3P79522 188 aaKnown RBP12.06□□□□□ -0.48
CAPN1-211ENST00000527739 OR10D4PQ8NGN7 298 aa12.06□□□□□ -0.48
CAPN1-211ENST00000527739 TGIF2-C20orf24A0A0A6YYL0 155 aa12.05□□□□□ -0.48
CAPN1-211ENST00000527739 IGHV3OR16-9A0A0B4J2B5 98 aa12.05□□□□□ -0.48
CAPN1-211ENST00000527739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.04□□□□□ -0.48
CAPN1-211ENST00000527739 Q8N8P6 123 aa12.04□□□□□ -0.48
CAPN1-211ENST00000527739 CTDSP1Q9GZU7 261 aa12.04□□□□□ -0.48
CAPN1-211ENST00000527739 PYGO1Q9Y3Y4 419 aa12.04□□□□□ -0.48
CAPN1-211ENST00000527739 IGLV4-3A0A075B6K6 122 aa12.03□□□□□ -0.48
CAPN1-211ENST00000527739 PRSS47A8MTI9 375 aa12.03□□□□□ -0.48
CAPN1-211ENST00000527739 TMEM141Q96I45 108 aa12.03□□□□□ -0.48
CAPN1-211ENST00000527739 CYSLTR1Q9Y271 337 aa12.03□□□□□ -0.48
CAPN1-211ENST00000527739 A0A1W2PNN7 141 aa12.02□□□□□ -0.49
CAPN1-211ENST00000527739 C2orf66Q6UXQ4 117 aa12.02□□□□□ -0.49
CAPN1-211ENST00000527739 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
CAPN1-211ENST00000527739 NDUFA1O15239 70 aa12.01□□□□□ -0.49
CAPN1-211ENST00000527739 RNF151Q2KHN1 245 aa12.01□□□□□ -0.49
CAPN1-211ENST00000527739 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
CAPN1-211ENST00000527739 C9orf116Q5BN46 136 aaPredicted RBP12□□□□□ -0.49
CAPN1-211ENST00000527739 LINC00242Q5T6M2 205 aa12□□□□□ -0.49
CAPN1-211ENST00000527739 UNQ6190/PRO20217Q6UXQ8 127 aa12□□□□□ -0.49
CAPN1-211ENST00000527739 Q6ZN92 141 aa12□□□□□ -0.49
CAPN1-211ENST00000527739 Q6ZRP5 223 aa12□□□□□ -0.49
CAPN1-211ENST00000527739 C2orf88Q9BSF0 95 aa12□□□□□ -0.49
CAPN1-211ENST00000527739 TMEM218A2RU14 115 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 F8WDY8 70 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 MT1HL1P0DM35 61 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 KIAA1644Q3SXP7 199 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 ZC2HC1BQ5TFG8 222 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 UQCC3Q6UW78 93 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 IMMP2LQ96T52 175 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 VCX2Q9H322 139 aa11.99□□□□□ -0.49
CAPN1-211ENST00000527739 MRPL35Q9NZE8 188 aaKnown RBP11.99□□□□□ -0.49
CAPN1-211ENST00000527739 A0A087WZ39 114 aa11.98□□□□□ -0.49
CAPN1-211ENST00000527739 ADCYAP1P18509 176 aa11.98□□□□□ -0.49
CAPN1-211ENST00000527739 C10orf25Q5T742 122 aa11.98□□□□□ -0.49
CAPN1-211ENST00000527739 NXT2Q9NPJ8 142 aaKnown RBP11.98□□□□□ -0.49
CAPN1-211ENST00000527739 IFITM2Q01629 132 aa11.97□□□□□ -0.49
CAPN1-211ENST00000527739 UBE2D1P51668 147 aa11.96□□□□□ -0.49
CAPN1-211ENST00000527739 GAGE2EQ4V326 116 aa11.96□□□□□ -0.49
CAPN1-211ENST00000527739 GAGE2DQ9UEU5 116 aa11.96□□□□□ -0.49
CAPN1-211ENST00000527739 SPINK6Q6UWN8 80 aa11.95□□□□□ -0.5
CAPN1-211ENST00000527739 PHF5AQ7RTV0 110 aaKnown RBP11.95□□□□□ -0.5
CAPN1-211ENST00000527739 C6orf48Q9UBA6 75 aa11.95□□□□□ -0.5
CAPN1-211ENST00000527739 K7EMI3 77 aa11.94□□□□□ -0.5
CAPN1-211ENST00000527739 MT-ND6P03923 174 aa11.94□□□□□ -0.5
CAPN1-211ENST00000527739 S100PP25815 95 aa11.94□□□□□ -0.5
CAPN1-211ENST00000527739 KIAA0087Q14695 138 aa11.93□□□□□ -0.5
CAPN1-211ENST00000527739 REG3GQ6UW15 175 aa11.93□□□□□ -0.5
CAPN1-211ENST00000527739 C2orf82Q6UX34 121 aa11.93□□□□□ -0.5
CAPN1-211ENST00000527739 AMELXQ99217 191 aa11.93□□□□□ -0.5
CAPN1-211ENST00000527739 TOMM7Q9P0U1 55 aa11.93□□□□□ -0.5
CAPN1-211ENST00000527739 IGIPA6NJ69 53 aa11.92□□□□□ -0.5
CAPN1-211ENST00000527739 PRSS2P07478 247 aa11.92□□□□□ -0.5
CAPN1-211ENST00000527739 G0S2P27469 103 aa11.92□□□□□ -0.5
CAPN1-211ENST00000527739 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
CAPN1-211ENST00000527739 COMMD7Q86VX2 200 aa11.92□□□□□ -0.5
CAPN1-211ENST00000527739 PACRGQ96M98 296 aaPredicted RBP11.92□□□□□ -0.5
CAPN1-211ENST00000527739 TNXBP22105 4242 aa11.92□□□□□ -0.5
CAPN1-211ENST00000527739 TRAV9-1A0A075B6T8 112 aa11.91□□□□□ -0.5
CAPN1-211ENST00000527739 FAM168BA1KXE4 195 aa11.91□□□□□ -0.5
CAPN1-211ENST00000527739 PAPPA-AS1Q5QFB9 102 aa11.91□□□□□ -0.5
CAPN1-211ENST00000527739 FAM19A5Q7Z5A7 132 aaPredicted RBP11.91□□□□□ -0.5
CAPN1-211ENST00000527739 LINC01600Q96MT4 127 aa11.91□□□□□ -0.5
CAPN1-211ENST00000527739 SEC11CQ9BY50 192 aa11.91□□□□□ -0.5
CAPN1-211ENST00000527739 PSORS1C2Q9UIG4 136 aa11.91□□□□□ -0.5
CAPN1-211ENST00000527739 NPSP0C0P6 89 aa11.9□□□□□ -0.5
CAPN1-211ENST00000527739 SRSF9Q13242 221 aaKnown RBP eCLIP11.9□□□□□ -0.5
CAPN1-211ENST00000527739 C1orf137Q5JT78 98 aa11.9□□□□□ -0.5
CAPN1-211ENST00000527739 LRP2P98164 4655 aa11.9□□□□□ -0.51
CAPN1-211ENST00000527739 TRBV30A0A0K0K1B3 111 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 TLX1NBP0CAT3 122 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 CKS1BP61024 79 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 C6orf226Q5I0X4 101 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 LINC01561Q8N1V8 128 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 TOMM6Q96B49 74 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 SCGB3A1Q96QR1 104 aa11.89□□□□□ -0.51
CAPN1-211ENST00000527739 GEMIN7Q9H840 131 aaKnown RBP11.89□□□□□ -0.51
CAPN1-211ENST00000527739 HERVK_113P63121 156 aa11.87□□□□□ -0.51
CAPN1-211ENST00000527739 SEC11AP67812 179 aa11.87□□□□□ -0.51
CAPN1-211ENST00000527739 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
CAPN1-211ENST00000527739 ALKBH7Q9BT30 221 aaPredicted RBP11.87□□□□□ -0.51
CAPN1-211ENST00000527739 GNB1LQ9BYB4 327 aa11.87□□□□□ -0.51
CAPN1-211ENST00000527739 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
CAPN1-211ENST00000527739 RNF213Q63HN8 5207 aa11.86□□□□□ -0.51
CAPN1-211ENST00000527739 NDUFC2-KCTD14E9PQ53 114 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms