RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 F8W036 122 aa13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 S100A8P05109 93 aa13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 RPL32P62910 135 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 RNF151Q2KHN1 245 aa13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 MRPL54Q6P161 138 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 PHF5AQ7RTV0 110 aaKnown RBP13.78□□□□□ -0.2
TRAPPC4-208ENST00000527680 C1orf137Q5JT78 98 aa13.77□□□□□ -0.21
TRAPPC4-208ENST00000527680 IMMP2LQ96T52 175 aa13.77□□□□□ -0.21
TRAPPC4-208ENST00000527680 SMIM2Q9BVW6 85 aa13.77□□□□□ -0.21
TRAPPC4-208ENST00000527680 SPANXA1Q9NS26 97 aa13.77□□□□□ -0.21
TRAPPC4-208ENST00000527680 IFITM10A6NMD0 228 aa13.75□□□□□ -0.21
TRAPPC4-208ENST00000527680 NDUFA1O15239 70 aa13.75□□□□□ -0.21
TRAPPC4-208ENST00000527680 HBBP68871 147 aa13.75□□□□□ -0.21
TRAPPC4-208ENST00000527680 SRSF3P84103 164 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-208ENST00000527680 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
TRAPPC4-208ENST00000527680 IGHV3OR16-9A0A0B4J2B5 98 aa13.74□□□□□ -0.21
TRAPPC4-208ENST00000527680 F8WDY8 70 aa13.74□□□□□ -0.21
TRAPPC4-208ENST00000527680 NPYP01303 97 aa13.74□□□□□ -0.21
TRAPPC4-208ENST00000527680 RAB5AP20339 215 aa13.73□□□□□ -0.21
TRAPPC4-208ENST00000527680 MRPS36P82909 103 aaKnown RBP13.73□□□□□ -0.21
TRAPPC4-208ENST00000527680 PPBPP02775 128 aa13.72□□□□□ -0.21
TRAPPC4-208ENST00000527680 FAM104AQ969W3 186 aa13.72□□□□□ -0.21
TRAPPC4-208ENST00000527680 LRP2P98164 4655 aa13.72□□□□□ -0.21
TRAPPC4-208ENST00000527680 A0A087WZ39 114 aa13.71□□□□□ -0.21
TRAPPC4-208ENST00000527680 TGIF2-C20orf24A0A0A6YYL0 155 aa13.71□□□□□ -0.21
TRAPPC4-208ENST00000527680 UNQ6190/PRO20217Q6UXQ8 127 aa13.71□□□□□ -0.21
TRAPPC4-208ENST00000527680 SMDT1Q9H4I9 107 aa13.71□□□□□ -0.21
TRAPPC4-208ENST00000527680 IFI27P40305 119 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC4-208ENST00000527680 GAGE2EQ4V326 116 aa13.7□□□□□ -0.22
TRAPPC4-208ENST00000527680 C10orf25Q5T742 122 aa13.7□□□□□ -0.22
TRAPPC4-208ENST00000527680 GAGE2DQ9UEU5 116 aa13.7□□□□□ -0.22
TRAPPC4-208ENST00000527680 TMEM136Q6ZRR5 245 aa13.69□□□□□ -0.22
TRAPPC4-208ENST00000527680 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
TRAPPC4-208ENST00000527680 A0A1B0GXF2 115 aa13.68□□□□□ -0.22
TRAPPC4-208ENST00000527680 FAM168BA1KXE4 195 aa13.68□□□□□ -0.22
TRAPPC4-208ENST00000527680 IGLV7-43P04211 117 aa13.67□□□□□ -0.22
TRAPPC4-208ENST00000527680 FAM19A5Q7Z5A7 132 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-208ENST00000527680 DIRC1Q969H9 104 aa13.67□□□□□ -0.22
TRAPPC4-208ENST00000527680 PRELID3AQ96N28 172 aa13.67□□□□□ -0.22
TRAPPC4-208ENST00000527680 C6orf48Q9UBA6 75 aa13.67□□□□□ -0.22
TRAPPC4-208ENST00000527680 LOC389332A0A1B0GUA5 103 aa13.65□□□□□ -0.22
TRAPPC4-208ENST00000527680 A0A1B0GVG6 124 aa13.65□□□□□ -0.22
TRAPPC4-208ENST00000527680 TLX1NBP0CAT3 122 aa13.65□□□□□ -0.22
TRAPPC4-208ENST00000527680 LINC00242Q5T6M2 205 aa13.63□□□□□ -0.23
TRAPPC4-208ENST00000527680 ATP5L2Q7Z4Y8 100 aa13.63□□□□□ -0.23
TRAPPC4-208ENST00000527680 TMEM141Q96I45 108 aa13.63□□□□□ -0.23
TRAPPC4-208ENST00000527680 PYGO1Q9Y3Y4 419 aa13.63□□□□□ -0.23
TRAPPC4-208ENST00000527680 IGLV4-3A0A075B6K6 122 aa13.62□□□□□ -0.23
TRAPPC4-208ENST00000527680 UBE2BP63146 152 aa13.62□□□□□ -0.23
TRAPPC4-208ENST00000527680 PRR26Q8N8Z3 221 aa13.62□□□□□ -0.23
TRAPPC4-208ENST00000527680 PACRGQ96M98 296 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-208ENST00000527680 KIAA0087Q14695 138 aa13.61□□□□□ -0.23
TRAPPC4-208ENST00000527680 C2orf82Q6UX34 121 aa13.61□□□□□ -0.23
TRAPPC4-208ENST00000527680 TEX43Q6ZNM6 134 aa13.61□□□□□ -0.23
TRAPPC4-208ENST00000527680 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
TRAPPC4-208ENST00000527680 C2orf88Q9BSF0 95 aa13.6□□□□□ -0.23
TRAPPC4-208ENST00000527680 MAP1LC3AQ9H492 121 aa13.6□□□□□ -0.23
TRAPPC4-208ENST00000527680 TRBV30A0A0K0K1B3 111 aa13.59□□□□□ -0.23
TRAPPC4-208ENST00000527680 RNF213Q63HN8 5207 aa13.59□□□□□ -0.23
TRAPPC4-208ENST00000527680 H0Y9J4 135 aa13.58□□□□□ -0.24
TRAPPC4-208ENST00000527680 M0QXV9 152 aa13.58□□□□□ -0.24
TRAPPC4-208ENST00000527680 Q6ZN92 141 aa13.58□□□□□ -0.24
TRAPPC4-208ENST00000527680 NDUFC2-KCTD14E9PQ53 114 aa13.57□□□□□ -0.24
TRAPPC4-208ENST00000527680 PRSS2P07478 247 aa13.57□□□□□ -0.24
TRAPPC4-208ENST00000527680 VCX2Q9H322 139 aa13.57□□□□□ -0.24
TRAPPC4-208ENST00000527680 CYSLTR1Q9Y271 337 aa13.57□□□□□ -0.24
TRAPPC4-208ENST00000527680 LAMTOR2Q9Y2Q5 125 aa13.57□□□□□ -0.24
TRAPPC4-208ENST00000527680 PRSS47A8MTI9 375 aa13.56□□□□□ -0.24
TRAPPC4-208ENST00000527680 UBE2D1P51668 147 aa13.56□□□□□ -0.24
TRAPPC4-208ENST00000527680 ZC2HC1BQ5TFG8 222 aa13.56□□□□□ -0.24
TRAPPC4-208ENST00000527680 TOMM7Q9P0U1 55 aa13.56□□□□□ -0.24
TRAPPC4-208ENST00000527680 C2orf66Q6UXQ4 117 aa13.55□□□□□ -0.24
TRAPPC4-208ENST00000527680 KRTAP7-1Q8IUC3 87 aa13.55□□□□□ -0.24
TRAPPC4-208ENST00000527680 Q8N8P6 123 aa13.55□□□□□ -0.24
TRAPPC4-208ENST00000527680 CKS1BP61024 79 aa13.54□□□□□ -0.24
TRAPPC4-208ENST00000527680 LINC01561Q8N1V8 128 aa13.54□□□□□ -0.24
TRAPPC4-208ENST00000527680 MT-ND4LP03901 98 aa13.53□□□□□ -0.24
TRAPPC4-208ENST00000527680 C6orf226Q5I0X4 101 aa13.53□□□□□ -0.24
TRAPPC4-208ENST00000527680 ORMDL2Q53FV1 153 aa13.52□□□□□ -0.25
TRAPPC4-208ENST00000527680 C9orf129Q5T035 196 aaKnown RBP13.52□□□□□ -0.25
TRAPPC4-208ENST00000527680 ANAPC16Q96DE5 110 aa13.52□□□□□ -0.25
TRAPPC4-208ENST00000527680 IGLV1-50A0A075B6I6 118 aa13.51□□□□□ -0.25
TRAPPC4-208ENST00000527680 PNRC1Q12796 327 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-208ENST00000527680 AMELXQ99217 191 aa13.5□□□□□ -0.25
TRAPPC4-208ENST00000527680 ALKBH7Q9BT30 221 aaPredicted RBP13.5□□□□□ -0.25
TRAPPC4-208ENST00000527680 LINC00469Q8N7U9 141 aa13.49□□□□□ -0.25
TRAPPC4-208ENST00000527680 LINC00173Q6ZV60 143 aa13.48□□□□□ -0.25
TRAPPC4-208ENST00000527680 CTDSP1Q9GZU7 261 aa13.48□□□□□ -0.25
TRAPPC4-208ENST00000527680 IGIPA6NJ69 53 aa13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 K7EMI3 77 aa13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 NPSP0C0P6 89 aa13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 SEC11AP67812 179 aa13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 PAPPA-AS1Q5QFB9 102 aa13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 GEMIN7Q9H840 131 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 NXT2Q9NPJ8 142 aaKnown RBP13.46□□□□□ -0.25
TRAPPC4-208ENST00000527680 KRTAP1-4P0C5Y4 121 aa13.45□□□□□ -0.26
TRAPPC4-208ENST00000527680 G0S2P27469 103 aa13.45□□□□□ -0.26
TRAPPC4-208ENST00000527680 RAB14P61106 215 aa13.45□□□□□ -0.26
TRAPPC4-208ENST00000527680 Q8IZM0 81 aa13.45□□□□□ -0.26
TRAPPC4-208ENST00000527680 XAGE1AQ9HD64 81 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms