RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821		F5H768	121 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821		F8VRH5	84 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	DPM2	O94777	84 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	MRPS36	P82909	103 aa	Known RBP	4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	ATP6V0E2	Q8NHE4	81 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	MRAP	Q8TCY5	172 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	ORAOV1	Q8WV07	137 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	OPRPN	Q99935	248 aa	Predicted RBP	4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	B9D2	Q9BPU9	175 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	MEGF8	Q7Z7M0	2845 aa		4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.23	□□□□□ -1.73
ATPAF1-208	ENST00000526821	TRBV25-1	A0A075B6N4	114 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821		A0A0J9YY99	117 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	IGKC	P01834	107 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	FGF6	P10767	208 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	PLN	P26678	52 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	MRPL23	Q16540	153 aa	Known RBP	4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	SPATA45	Q537H7	98 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	PAPPA-AS1	Q5QFB9	102 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	ZC2HC1B	Q5TFG8	222 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	CEMP1	Q6PRD7	247 aa	Predicted RBP	4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	SH2D6	Q7Z4S9	175 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	NFE4	Q86UQ8	179 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	C11orf45	Q8TAV5	145 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821	TMEM243	Q9BU79	118 aa		4.22	□□□□□ -1.73
ATPAF1-208	ENST00000526821		A0A096LPF7	62 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	hDV102S1	A0JD36	115 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	IGLC3	P0DOY3	106 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	HTN3	P15516	51 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	SMAGP	Q0VAQ4	97 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821		Q6ZUT4	128 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	FAM19A3	Q7Z5A8	133 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	STPG4	Q8N801	248 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	VCX2	Q9H322	139 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	CDC42SE2	Q9NRR3	84 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	ICOS	Q9Y6W8	199 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	COL7A1	Q02388	2944 aa		4.21	□□□□□ -1.74
ATPAF1-208	ENST00000526821	PLEC	Q15149	4684 aa	Known RBP	4.2	□□□□□ -1.74
ATPAF1-208	ENST00000526821	DEFB131B	A0A096LNP1	70 aa		4.2	□□□□□ -1.74
ATPAF1-208	ENST00000526821	C11orf86	A6NJI1	115 aa		4.2	□□□□□ -1.74
ATPAF1-208	ENST00000526821	HSBP1L1	C9JCN9	74 aa		4.2	□□□□□ -1.74
ATPAF1-208	ENST00000526821	UBE2D1	P51668	147 aa		4.2	□□□□□ -1.74
ATPAF1-208	ENST00000526821	IGKV2D-26	A0A0A0MRZ7	120 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	TRAV10	A0A0B4J240	114 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821		A0A0J9YXV3	536 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	TINCR	A0A1B0GVN0	87 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	UBE2L6	O14933	153 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	COX8A	P10176	69 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	GAGE6	Q13070	117 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	RNASE13	Q5GAN3	156 aa	Known RBP	4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	LELP1	Q5T871	98 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	LYPD5	Q6UWN5	251 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	OR5A1	Q8NGJ0	315 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	CHCHD5	Q9BSY4	110 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	DNAH7	Q8WXX0	4024 aa		4.19	□□□□□ -1.74
ATPAF1-208	ENST00000526821	IGLV4-60	A0A075B6I1	120 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	IGLV5-45	A0A087WSX0	123 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821		E9PLD3	99 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	CCL25	O15444	150 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	ZNF22	P17026	224 aa	Predicted RBP	4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	UBE2V1	Q13404	147 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	MPV17L2	Q567V2	206 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	LINC00242	Q5T6M2	205 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	AMMECR1L	Q6DCA0	310 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	BOD1L2	Q8IYS8	172 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	TMEM101	Q96IK0	257 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	CHAC1	Q9BUX1	264 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	UQCR10	Q9UDW1	63 aa		4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	MRPS16	Q9Y3D3	137 aa	Known RBP	4.18	□□□□□ -1.74
ATPAF1-208	ENST00000526821	STARD9	Q9P2P6	4700 aa		4.17	□□□□□ -1.74
ATPAF1-208	ENST00000526821	TMEM223	A0PJW6	202 aa		4.17	□□□□□ -1.74
ATPAF1-208	ENST00000526821	SLC25A34	Q6PIV7	304 aa		4.17	□□□□□ -1.74
ATPAF1-208	ENST00000526821	FBN3	Q75N90	2809 aa		4.17	□□□□□ -1.74
ATPAF1-208	ENST00000526821	CSMD3	Q7Z407	3707 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	HERVK_113	P63121	156 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	SEC11A	P67812	179 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	COX6A2	Q02221	97 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	ESRG	Q1W209	222 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	PCP2	Q8IVA1	136 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	C15orf53	Q8NAA6	179 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	TP73-AS1	Q9UF72	201 aa		4.16	□□□□□ -1.74
ATPAF1-208	ENST00000526821	DNAH1	Q9P2D7	4330 aa		4.15	□□□□□ -1.74
ATPAF1-208	ENST00000526821		A0A087WYN8	130 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TRAV13-1	A0A0B4J241	112 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LINC00959	A0A1B0GUT2	108 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TMEM262	E9PQX1	116 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	LEPROT	O15243	131 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	SIVA1	O15304	175 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	NMU	P48645	174 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TCTA	P57738	103 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	HERVK_113	P61574	105 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TMEM170B	Q5T4T1	132 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	C2orf91	Q6ZV80	131 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	MAPKAPK5-AS1	Q8N8E1	139 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	TTTY13	Q9BZ97	58 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	PRR34	Q9NV39	138 aa		4.15	□□□□□ -1.75
ATPAF1-208	ENST00000526821	CDKN2A-AS1	Q9UH64	79 aa		4.15	□□□□□ -1.75

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