RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 CHTF8P0CG12 524 aa11.71□□□□□ -0.53
TSPAN4-216ENST00000526055 PRSS3P2Q8NHM4 247 aa11.71□□□□□ -0.53
TSPAN4-216ENST00000526055 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.53
TSPAN4-216ENST00000526055 PYGO1Q9Y3Y4 419 aa11.71□□□□□ -0.53
TSPAN4-216ENST00000526055 SYCNQ0VAF6 134 aa11.7□□□□□ -0.54
TSPAN4-216ENST00000526055 FAM104AQ969W3 186 aa11.7□□□□□ -0.54
TSPAN4-216ENST00000526055 TGIF2-C20orf24A0A0A6YYL0 155 aa11.69□□□□□ -0.54
TSPAN4-216ENST00000526055 J3QL48 77 aa11.69□□□□□ -0.54
TSPAN4-216ENST00000526055 K7EMI3 77 aa11.69□□□□□ -0.54
TSPAN4-216ENST00000526055 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
TSPAN4-216ENST00000526055 SMCO4Q9NRQ5 59 aa11.69□□□□□ -0.54
TSPAN4-216ENST00000526055 MAJINQ3KP22 176 aa11.68□□□□□ -0.54
TSPAN4-216ENST00000526055 Q8N8P6 123 aa11.68□□□□□ -0.54
TSPAN4-216ENST00000526055 C2orf48Q96LS8 159 aa11.68□□□□□ -0.54
TSPAN4-216ENST00000526055 IGLV4-69A0A075B6H9 119 aa11.67□□□□□ -0.54
TSPAN4-216ENST00000526055 OXTP01178 125 aa11.67□□□□□ -0.54
TSPAN4-216ENST00000526055 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
TSPAN4-216ENST00000526055 MRPL18Q9H0U6 180 aaKnown RBP11.67□□□□□ -0.54
TSPAN4-216ENST00000526055 IGKV2-24A0A0C4DH68 120 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 IFITM10A6NMD0 228 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 F8WDY8 70 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 FABP9Q0Z7S8 132 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 C5orf38Q86SI9 138 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 OR10D4PQ8NGN7 298 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 C7orf33Q8WU49 177 aa11.66□□□□□ -0.54
TSPAN4-216ENST00000526055 A0A096LNI7 61 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 NPSP0C0P6 89 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 KIAA1644Q3SXP7 199 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 ORMDL2Q53FV1 153 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 OPRPNQ99935 248 aaPredicted RBP11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 NXT2Q9NPJ8 142 aaKnown RBP11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 TRAPPC1Q9Y5R8 145 aa11.65□□□□□ -0.54
TSPAN4-216ENST00000526055 STPG4Q8N801 248 aa11.64□□□□□ -0.55
TSPAN4-216ENST00000526055 TMEM141Q96I45 108 aa11.64□□□□□ -0.55
TSPAN4-216ENST00000526055 CAMK2N2Q96S95 79 aa11.64□□□□□ -0.55
TSPAN4-216ENST00000526055 CYSLTR1Q9Y271 337 aa11.64□□□□□ -0.55
TSPAN4-216ENST00000526055 IGLV4-3A0A075B6K6 122 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 LOC107984640A0A0U1RRK4 108 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 G0S2P27469 103 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 RNF151Q2KHN1 245 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 Q6ZRU5 148 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 CBLN2Q8IUK8 224 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 YPEL4Q96NS1 127 aa11.63□□□□□ -0.55
TSPAN4-216ENST00000526055 SPAG11BQ08648 103 aa11.62□□□□□ -0.55
TSPAN4-216ENST00000526055 C2orf66Q6UXQ4 117 aa11.62□□□□□ -0.55
TSPAN4-216ENST00000526055 ALKBH7Q9BT30 221 aaPredicted RBP11.62□□□□□ -0.55
TSPAN4-216ENST00000526055 PTTG1IPP53801 180 aa11.61□□□□□ -0.55
TSPAN4-216ENST00000526055 Q6ZN92 141 aa11.61□□□□□ -0.55
TSPAN4-216ENST00000526055 TEX43Q6ZNM6 134 aa11.61□□□□□ -0.55
TSPAN4-216ENST00000526055 ORAOV1Q8WV07 137 aa11.6□□□□□ -0.55
TSPAN4-216ENST00000526055 C2orf88Q9BSF0 95 aa11.6□□□□□ -0.55
TSPAN4-216ENST00000526055 A0A087WZ39 114 aa11.59□□□□□ -0.55
TSPAN4-216ENST00000526055 HNRNPA3P51991 378 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-216ENST00000526055 LINC00242Q5T6M2 205 aa11.59□□□□□ -0.55
TSPAN4-216ENST00000526055 MRPL35Q9NZE8 188 aaKnown RBP11.59□□□□□ -0.55
TSPAN4-216ENST00000526055 PAPPA-AS1Q5QFB9 102 aa11.58□□□□□ -0.56
TSPAN4-216ENST00000526055 LINC01561Q8N1V8 128 aa11.58□□□□□ -0.56
TSPAN4-216ENST00000526055 AMELXQ99217 191 aa11.58□□□□□ -0.56
TSPAN4-216ENST00000526055 IGIPA6NJ69 53 aa11.57□□□□□ -0.56
TSPAN4-216ENST00000526055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.57□□□□□ -0.56
TSPAN4-216ENST00000526055 UBE2D1P51668 147 aa11.57□□□□□ -0.56
TSPAN4-216ENST00000526055 VCX2Q9H322 139 aa11.57□□□□□ -0.56
TSPAN4-216ENST00000526055 LINC01549A6NIU2 74 aa11.56□□□□□ -0.56
TSPAN4-216ENST00000526055 NDUFA1O15239 70 aa11.56□□□□□ -0.56
TSPAN4-216ENST00000526055 GAGE2BQ13066 116 aa11.56□□□□□ -0.56
TSPAN4-216ENST00000526055 TIMM17AQ99595 171 aa11.55□□□□□ -0.56
TSPAN4-216ENST00000526055 PKHD1L1Q86WI1 4243 aa11.55□□□□□ -0.56
TSPAN4-216ENST00000526055 SEC11AP67812 179 aa11.54□□□□□ -0.56
TSPAN4-216ENST00000526055 PRR3P79522 188 aaKnown RBP11.54□□□□□ -0.56
TSPAN4-216ENST00000526055 LINC00173Q6ZV60 143 aa11.54□□□□□ -0.56
TSPAN4-216ENST00000526055 FA2HQ7L5A8 372 aa11.54□□□□□ -0.56
TSPAN4-216ENST00000526055 FAM19A3Q7Z5A8 133 aa11.54□□□□□ -0.56
TSPAN4-216ENST00000526055 TOMM6Q96B49 74 aa11.54□□□□□ -0.56
TSPAN4-216ENST00000526055 LRP1Q07954 4544 aaKnown RBP11.53□□□□□ -0.56
TSPAN4-216ENST00000526055 LINC01546A6NGU7 62 aa11.53□□□□□ -0.56
TSPAN4-216ENST00000526055 TLX1NBP0CAT3 122 aa11.53□□□□□ -0.56
TSPAN4-216ENST00000526055 RPL18AQ02543 176 aaKnown RBP11.53□□□□□ -0.56
TSPAN4-216ENST00000526055 C18orf32Q8TCD1 76 aa11.53□□□□□ -0.56
TSPAN4-216ENST00000526055 RAB5BP61020 215 aa11.52□□□□□ -0.57
TSPAN4-216ENST00000526055 KIAA0087Q14695 138 aa11.52□□□□□ -0.57
TSPAN4-216ENST00000526055 S100A1P23297 94 aa11.51□□□□□ -0.57
TSPAN4-216ENST00000526055 ERASQ7Z444 233 aa11.51□□□□□ -0.57
TSPAN4-216ENST00000526055 FAT3Q8TDW7 4589 aa11.5□□□□□ -0.57
TSPAN4-216ENST00000526055 TRBV30A0A0K0K1B3 111 aa11.5□□□□□ -0.57
TSPAN4-216ENST00000526055 COLCA2A8K830 154 aa11.5□□□□□ -0.57
TSPAN4-216ENST00000526055 A0A0J9YXV3 536 aa11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 HERVK_113P63121 156 aa11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 C9orf116Q5BN46 136 aaPredicted RBP11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 SERTAD4-AS1Q5TG53 156 aa11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 UNQ6190/PRO20217Q6UXQ8 127 aa11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 Q6ZRP5 223 aa11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 C6orf48Q9UBA6 75 aa11.49□□□□□ -0.57
TSPAN4-216ENST00000526055 A0A1W2PNN7 141 aa11.48□□□□□ -0.57
TSPAN4-216ENST00000526055 TRGC2P03986 189 aa11.48□□□□□ -0.57
TSPAN4-216ENST00000526055 LINC00614P0C842 121 aa11.48□□□□□ -0.57
TSPAN4-216ENST00000526055 C10orf25Q5T742 122 aa11.48□□□□□ -0.57
TSPAN4-216ENST00000526055 ZC2HC1BQ5TFG8 222 aa11.48□□□□□ -0.57
TSPAN4-216ENST00000526055 SCGB3A1Q96QR1 104 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms