RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 SMDT1Q9H4I9 107 aa3.75□□□□□ -1.81
CCDC90B-204ENST00000525504 TRBV24-1A0A075B6N3 115 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 A0A0U1RRA0 63 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 SMIM27A0A1W2PRY6 76 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 CCL25O15444 150 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 NPSP0C0P6 89 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 CHTF8P0CG12 524 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 RPL23P62829 140 aaKnown RBP3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 RPL32P62910 135 aaKnown RBP3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 COX6A2Q02221 97 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 FAM104BQ5XKR9 115 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 CD164L2Q6UWJ8 174 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 AMN1Q8IY45 258 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 SLC7A5P1Q8MH63 180 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 ZNF664Q8N3J9 261 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 PRSS3P2Q8NHM4 247 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 ISOC2Q96AB3 205 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 BORCS7Q96B45 105 aa3.74□□□□□ -1.81
CCDC90B-204ENST00000525504 IGHV1-58A0A0C4DH39 117 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 IGKV3OR2-268A0A0C4DH90 116 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 A0A1B0GVG6 124 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 A0A1B0GW15 77 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 C7orf77A4D0Y5 90 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 LINC00862A6NCI5 91 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 ATP6V1G1O75348 118 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 XCL1P47992 114 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 CEBPGP53567 150 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 SUMO2P61956 95 aaKnown RBP3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 ERASQ7Z444 233 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 DPH3Q96FX2 82 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 TMEM101Q96IK0 257 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 BTF3L4Q96K17 158 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 C20orf78Q9BR46 151 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 TIMM21Q9BVV7 248 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 TMEM242Q9NWH2 141 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 LINC00474Q9P2X8 69 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 NAT8BQ9UHF3 227 aa3.73□□□□□ -1.81
CCDC90B-204ENST00000525504 C1orf196B1AJZ1 125 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 PPP1R2P9O14990 202 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 PEA15Q15121 130 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 SS18Q15532 418 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 MRPL51Q4U2R6 128 aaKnown RBP3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 HIGD2BQ4VC39 106 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 FAM104AQ969W3 186 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 NAT8Q9UHE5 227 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 UBE2D4Q9Y2X8 147 aa3.72□□□□□ -1.81
CCDC90B-204ENST00000525504 A0A096LNI7 61 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 A0A1B0GXF2 115 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 SMKR1H3BMG3 65 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 PHOX2AO14813 284 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 TCAPO15273 167 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 SYCNQ0VAF6 134 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 SMAGPQ0VAQ4 97 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 SRSF9Q13242 221 aaKnown RBP eCLIP3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 KIR2DL4Q99706 377 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 ALKBH7Q9BT30 221 aaPredicted RBP3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 PKIGQ9Y2B9 76 aa3.71□□□□□ -1.82
CCDC90B-204ENST00000525504 A0A0A0MQY5 61 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 COX7A2LO14548 114 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 PPBPP02775 128 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 FCER1GP30273 86 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 MRPS36P82909 103 aaKnown RBP3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 ADIRFQ15847 76 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 STPG4Q8N801 248 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 C7orf33Q8WU49 177 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 LINC00526Q96FQ7 95 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 C2orf48Q96LS8 159 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 CARD19Q96LW7 228 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 LINC01600Q96MT4 127 aa3.7□□□□□ -1.82
CCDC90B-204ENST00000525504 IGLV4-69A0A075B6H9 119 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 IGHV3OR16-9A0A0B4J2B5 98 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 IGKV2-24A0A0C4DH68 120 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 F8W036 122 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 PRYO14603 147 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 S100A8P05109 93 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 CKS2P33552 79 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 KRTAP10-8P60410 259 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 PRR3P79522 188 aaKnown RBP3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 LRP2P98164 4655 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 TMEM18Q96B42 140 aa3.69□□□□□ -1.82
CCDC90B-204ENST00000525504 RNF213Q63HN8 5207 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 TRAV13-1A0A0B4J241 112 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 LOC107984640A0A0U1RRK4 108 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 A0A1W2PNN7 141 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 APOMO95445 188 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 HBBP68871 147 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 SPINK6Q6UWN8 80 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 TMEM136Q6ZRR5 245 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 Q6ZUT4 128 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 ATP5L2Q7Z4Y8 100 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 C5orf38Q86SI9 138 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 SMIM2Q9BVW6 85 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 SPANXA1Q9NS26 97 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 PYGO1Q9Y3Y4 419 aa3.68□□□□□ -1.82
CCDC90B-204ENST00000525504 D6R8Y8 96 aa3.67□□□□□ -1.82
CCDC90B-204ENST00000525504 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.67□□□□□ -1.82
CCDC90B-204ENST00000525504 NPYP01303 97 aa3.67□□□□□ -1.82
CCDC90B-204ENST00000525504 RPL39P62891 51 aaKnown RBP3.67□□□□□ -1.82
CCDC90B-204ENST00000525504 RNASE13Q5GAN3 156 aaKnown RBP3.67□□□□□ -1.82
CCDC90B-204ENST00000525504 MRPL54Q6P161 138 aaKnown RBP3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms