RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 C1orf196B1AJZ1 125 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 PLA2G1BP04054 148 aaKnown RBP6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 SS18Q15532 418 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 Q6ZN92 141 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 CIRBP-AS1Q8TBR5 109 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 URB1-AS1Q96HZ7 61 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 SCGB3A1Q96QR1 104 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 HMCN2Q8NDA2 5059 aa6.26□□□□□ -1.41
CNKSR1-209ENST00000524529 IGLV4-3A0A075B6K6 122 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 J3QL48 77 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 HBDP02042 147 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 FAM104AQ969W3 186 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 CHAC1Q9BUX1 264 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 VCX2Q9H322 139 aa6.25□□□□□ -1.41
CNKSR1-209ENST00000524529 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BKO60814 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HSBP1O75506 76 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BJP06899 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BOP23527 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BBP33778 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BDP58876 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BCP62807 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST2H2BEQ16778 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 KRTAP26-1Q6PEX3 210 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 TEX43Q6ZNM6 134 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 Q6ZUT4 128 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BHQ93079 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BNQ99877 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 HIST1H2BMQ99879 126 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 C2orf88Q9BSF0 95 aa6.24□□□□□ -1.41
CNKSR1-209ENST00000524529 IGKV3OR2-268A0A0C4DH90 116 aa6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 ATP5LO75964 103 aa6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 PDZD11Q5EBL8 140 aa6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 CD164L2Q6UWJ8 174 aa6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 CHCHD10Q8WYQ3 142 aaPredicted RBP6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 AMELXQ99217 191 aa6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 OPRPNQ99935 248 aaPredicted RBP6.23□□□□□ -1.41
CNKSR1-209ENST00000524529 IGLV10-54A0A075B6I4 117 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 GAGE12HA6NDE8 117 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 IFITM10A6NMD0 228 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 SERF1AO75920 110 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 PRSS1P07477 247 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 SEC11AP67812 179 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 C14orf177Q52M58 125 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 CFAP161Q6P656 301 aa6.22□□□□□ -1.41
CNKSR1-209ENST00000524529 A0A096LNJ9 63 aa6.21□□□□□ -1.42
CNKSR1-209ENST00000524529 USP17L23D6RBM5 183 aa6.21□□□□□ -1.42
CNKSR1-209ENST00000524529 PANO1I0J062 215 aa6.21□□□□□ -1.42
CNKSR1-209ENST00000524529 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
CNKSR1-209ENST00000524529 RNASE13Q5GAN3 156 aaKnown RBP6.21□□□□□ -1.42
CNKSR1-209ENST00000524529 FAM19A3Q7Z5A8 133 aa6.21□□□□□ -1.42
CNKSR1-209ENST00000524529 XCL1P47992 114 aa6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 UBE2D1P51668 147 aa6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 FOXI1Q12951 378 aa6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 PMVKQ15126 192 aa6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 PMCHL1Q16048 86 aa6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 COA6Q5JTJ3 125 aaKnown RBP6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 CST9LQ9H4G1 147 aa6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.2□□□□□ -1.42
CNKSR1-209ENST00000524529 COX7A2LO14548 114 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 LEPROTL1O95214 131 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 LINC00310P59036 64 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 LINC00242Q5T6M2 205 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 LINC00173Q6ZV60 143 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 FAM19A2Q8N3H0 131 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 PACRGQ96M98 296 aaPredicted RBP6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 HSPB8Q9UJY1 196 aa6.19□□□□□ -1.42
CNKSR1-209ENST00000524529 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 IGHV1-58A0A0C4DH39 117 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 NUPR1O60356 82 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 APOMO95445 188 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 MALP21145 153 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 HERVK_113P63121 156 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 LINC01561Q8N1V8 128 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 C9orf163Q8N9P6 203 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 IFI27L1Q96BM0 104 aa6.18□□□□□ -1.42
CNKSR1-209ENST00000524529 TRAV12-1A0A0B4J245 112 aa6.17□□□□□ -1.42
CNKSR1-209ENST00000524529 TINCRA0A1B0GVN0 87 aa6.17□□□□□ -1.42
CNKSR1-209ENST00000524529 SLPIP03973 132 aa6.17□□□□□ -1.42
CNKSR1-209ENST00000524529 NDUFA6P56556 154 aa6.17□□□□□ -1.42
CNKSR1-209ENST00000524529 SDIM1Q6ZPB5 146 aa6.17□□□□□ -1.42
CNKSR1-209ENST00000524529 GEMIN7Q9H840 131 aaKnown RBP6.17□□□□□ -1.42
CNKSR1-209ENST00000524529 A0A087WZ39 114 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 A0A0J9YXV3 536 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 F8WDY8 70 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 OXTP01178 125 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 RPL37AP61513 92 aaKnown RBP6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 COX6A2Q02221 97 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 ZC2HC1BQ5TFG8 222 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 SERTAD4-AS1Q5TG53 156 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 C5orf38Q86SI9 138 aa6.16□□□□□ -1.42
CNKSR1-209ENST00000524529 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
CNKSR1-209ENST00000524529 C15orf56Q8N910 161 aa6.15□□□□□ -1.42
CNKSR1-209ENST00000524529 OR10D4PQ8NGN7 298 aa6.15□□□□□ -1.42
CNKSR1-209ENST00000524529 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
CNKSR1-209ENST00000524529 IGHV3-64A0A075B6Q5 118 aa6.14□□□□□ -1.43
CNKSR1-209ENST00000524529 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms