RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 SYCNQ0VAF6 134 aa5.35□□□□□ -1.55
CTNNA1-242ENST00000524292 PEA15Q15121 130 aa5.35□□□□□ -1.55
CTNNA1-242ENST00000524292 NRACQ8N912 160 aa5.35□□□□□ -1.55
CTNNA1-242ENST00000524292 LINC00526Q96FQ7 95 aa5.35□□□□□ -1.55
CTNNA1-242ENST00000524292 NAT8Q9UHE5 227 aa5.35□□□□□ -1.55
CTNNA1-242ENST00000524292 TRAV13-1A0A0B4J241 112 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 SMIM27A0A1W2PRY6 76 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 LINC00862A6NCI5 91 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 F8W036 122 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 CKS2P33552 79 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 MRPL51Q4U2R6 128 aaKnown RBP5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 FAM104BQ5XKR9 115 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 C20orf78Q9BR46 151 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 TIMM21Q9BVV7 248 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 UBE2D4Q9Y2X8 147 aa5.34□□□□□ -1.55
CTNNA1-242ENST00000524292 FAT3Q8TDW7 4589 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 IGLV4-69A0A075B6H9 119 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 LOC107984640A0A0U1RRK4 108 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 APOMO95445 188 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 MT1HL1P0DM35 61 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 RNASE13Q5GAN3 156 aaKnown RBP5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 Q6ZUT4 128 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 CAMK2N2Q96S95 79 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 SMDT1Q9H4I9 107 aa5.33□□□□□ -1.56
CTNNA1-242ENST00000524292 TRBV24-1A0A075B6N3 115 aa5.32□□□□□ -1.56
CTNNA1-242ENST00000524292 RPL32P62910 135 aaKnown RBP5.32□□□□□ -1.56
CTNNA1-242ENST00000524292 HBBP68871 147 aa5.32□□□□□ -1.56
CTNNA1-242ENST00000524292 SPANXA1Q9NS26 97 aa5.32□□□□□ -1.56
CTNNA1-242ENST00000524292 C9JQL5 133 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 TNFRSF6BO95407 300 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 PPBPP02775 128 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 SPAG11BQ08648 103 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 MRPL54Q6P161 138 aaKnown RBP5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 REG3GQ6UW15 175 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 Q6ZRP5 223 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 C5orf38Q86SI9 138 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 SMIM2Q9BVW6 85 aa5.31□□□□□ -1.56
CTNNA1-242ENST00000524292 HMCN2Q8NDA2 5059 aa5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 A0A1B0GVG6 124 aa5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 D6R8Y8 96 aa5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 RAB5AP20339 215 aa5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 RPL39P62891 51 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 RPL18AQ02543 176 aaKnown RBP5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 SPINK6Q6UWN8 80 aa5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 OR10D4PQ8NGN7 298 aa5.3□□□□□ -1.56
CTNNA1-242ENST00000524292 A0A1B0GXF2 115 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 IFITM10A6NMD0 228 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 F8WDY8 70 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 MRPS36P82909 103 aaKnown RBP5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 ATP5L2Q7Z4Y8 100 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 ORMDL3Q8N138 153 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 ORAOV1Q8WV07 137 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 LINC01600Q96MT4 127 aa5.29□□□□□ -1.56
CTNNA1-242ENST00000524292 TGIF2-C20orf24A0A0A6YYL0 155 aa5.28□□□□□ -1.56
CTNNA1-242ENST00000524292 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-242ENST00000524292 NDUFA1O15239 70 aa5.28□□□□□ -1.56
CTNNA1-242ENST00000524292 NPYP01303 97 aa5.28□□□□□ -1.56
CTNNA1-242ENST00000524292 IFI27P40305 119 aaPredicted RBP5.28□□□□□ -1.56
CTNNA1-242ENST00000524292 IGHV3OR16-9A0A0B4J2B5 98 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 A0A0J9YXV3 536 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 MT-ND6P03923 174 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 C9orf116Q5BN46 136 aaPredicted RBP5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 TMEM136Q6ZRR5 245 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 PRELID3AQ96N28 172 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 IMMP2LQ96T52 175 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 MRPL35Q9NZE8 188 aaKnown RBP5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 LAMTOR2Q9Y2Q5 125 aa5.27□□□□□ -1.57
CTNNA1-242ENST00000524292 A0A1W2PNN7 141 aa5.26□□□□□ -1.57
CTNNA1-242ENST00000524292 PNRC1Q12796 327 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-242ENST00000524292 OPRPNQ99935 248 aaPredicted RBP5.26□□□□□ -1.57
CTNNA1-242ENST00000524292 MAP1LC3AQ9H492 121 aa5.26□□□□□ -1.57
CTNNA1-242ENST00000524292 MT-ND4LP03901 98 aa5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 SRSF9Q13242 221 aaKnown RBP eCLIP5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 Q6ZN92 141 aa5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 TEX43Q6ZNM6 134 aa5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 TMEM141Q96I45 108 aa5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 C2orf88Q9BSF0 95 aa5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 PYGO1Q9Y3Y4 419 aa5.25□□□□□ -1.57
CTNNA1-242ENST00000524292 IGLV4-3A0A075B6K6 122 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 A0A087WZ39 114 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 LOC389332A0A1B0GUA5 103 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 RAB14P61106 215 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 FAM104AQ969W3 186 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 PSORS1C2Q9UIG4 136 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 CYSLTR1Q9Y271 337 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 UBR4Q5T4S7 5183 aa5.24□□□□□ -1.57
CTNNA1-242ENST00000524292 TLX1NBP0CAT3 122 aa5.23□□□□□ -1.57
CTNNA1-242ENST00000524292 C1orf137Q5JT78 98 aa5.23□□□□□ -1.57
CTNNA1-242ENST00000524292 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
CTNNA1-242ENST00000524292 PHF5AQ7RTV0 110 aaKnown RBP5.23□□□□□ -1.57
CTNNA1-242ENST00000524292 TNXBP22105 4242 aa5.23□□□□□ -1.57
CTNNA1-242ENST00000524292 TRBV30A0A0K0K1B3 111 aa5.22□□□□□ -1.57
CTNNA1-242ENST00000524292 PRSS47A8MTI9 375 aa5.22□□□□□ -1.57
CTNNA1-242ENST00000524292 K7EMI3 77 aa5.22□□□□□ -1.57
CTNNA1-242ENST00000524292 PRSS2P07478 247 aa5.22□□□□□ -1.57
CTNNA1-242ENST00000524292 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
CTNNA1-242ENST00000524292 GAGE2EQ4V326 116 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms