RNA–Protein interactions for RNA: ENST00000524238.3

HMBOX1-211, Transcript of homeobox containing 1, humanhuman

TSL 2 BASIC

Gene HMBOX1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-211ENST00000524238 COX17Q14061 63 aa5.31□□□□□ -1.56
HMBOX1-211ENST00000524238 C6orf226Q5I0X4 101 aa5.31□□□□□ -1.56
HMBOX1-211ENST00000524238 C9orf129Q5T035 196 aaKnown RBP5.31□□□□□ -1.56
HMBOX1-211ENST00000524238 WDFY4Q6ZS81 3184 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 CACNA1HO95180 2353 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 TRAV23DV6A0A075B6W5 121 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 NBL1P41271 181 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 KLKP1Q107X0 134 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 C4orf26Q17RF5 130 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 DEFB112Q30KQ8 113 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 HRCT1Q6UXD1 115 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 Q8IZM0 81 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 C20orf197Q8N268 126 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 MUC7Q8TAX7 377 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 PRO0628Q9UI54 55 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 DMXL2Q8TDJ6 3036 aa5.3□□□□□ -1.56
HMBOX1-211ENST00000524238 LOC110117498A0A087WWA1 95 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 OXTP01178 125 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 PFN2P35080 140 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 SS18Q15532 418 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 C10orf99Q6UWK7 81 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 ENHOQ6UWT2 76 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 C4orf3Q8WVX3 66 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 C16orf74Q96GX8 76 aa5.29□□□□□ -1.56
HMBOX1-211ENST00000524238 SLPIP03973 132 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 PRM2P04554 102 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 SLURP1P55000 103 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 RBM3P98179 157 aaKnown RBP5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 DEFB114Q30KQ6 69 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 C1orf158Q8N1D5 194 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 LINC01356Q8N9X3 169 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 ZNF702PQ9H963 129 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 TRBV6-8A0A0A6YYG3 113 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 ZNF561-AS1K7EIQ3 104 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 CXCL6P80162 114 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 Q6ZTI0 123 aa5.28□□□□□ -1.56
HMBOX1-211ENST00000524238 IGHV4-30-2A0A087WSY4 118 aa5.27□□□□□ -1.57
HMBOX1-211ENST00000524238 H7BZZ5 65 aa5.27□□□□□ -1.57
HMBOX1-211ENST00000524238 HILS1P60008 231 aa5.27□□□□□ -1.57
HMBOX1-211ENST00000524238 FAM19A1Q7Z5A9 133 aa5.27□□□□□ -1.57
HMBOX1-211ENST00000524238 LINC00482Q8N8I6 264 aa5.27□□□□□ -1.57
HMBOX1-211ENST00000524238 TRGV2A0A075B6R0 118 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 TRGV4A0A0C4DH28 118 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 LINC00959A0A1B0GUT2 108 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 Q6YL49 198 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 A0A1B0GUV1 79 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 AVPP01185 164 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 Q6ZQT0 140 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 C6orf223Q8N319 242 aa5.26□□□□□ -1.57
HMBOX1-211ENST00000524238 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
HMBOX1-211ENST00000524238 ODF3L2Q3SX64 289 aa5.25□□□□□ -1.57
HMBOX1-211ENST00000524238 NOP10Q9NPE3 64 aaKnown RBP5.25□□□□□ -1.57
HMBOX1-211ENST00000524238 COL6A6A6NMZ7 2263 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 ABCA2Q9BZC7 2435 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 SPTBN1Q01082 2364 aaKnown RBP5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 ADGRG4Q8IZF6 3080 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 IGLV4-60A0A075B6I1 120 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 ERC2-IT1O76042 136 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 LINC01547P58512 204 aaPredicted RBP5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 C9orf66Q5T8R8 295 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 LINC00575Q6W349 94 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 LAMTOR3Q9UHA4 124 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 BSNQ9UPA5 3926 aa5.24□□□□□ -1.57
HMBOX1-211ENST00000524238 IGHV4-28A0A0C4DH34 117 aa5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 C19orf84I3L1E1 186 aa5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 NANOS2P60321 138 aaKnown RBP5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 DEFB136Q30KP8 78 aa5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 EP300Q09472 2414 aaPredicted RBP5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 TACC2O95359 2948 aa5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 WFDC9Q8NEX5 89 aa5.23□□□□□ -1.57
HMBOX1-211ENST00000524238 ANKRD11Q6UB99 2663 aaPredicted RBP5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 HAMPP81172 84 aa5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 C6orf99Q4VX62 202 aa5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 KHDC1LQ5JSQ8 128 aa5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 Q6ZVQ6 151 aa5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 CSMD1Q96PZ7 3565 aa5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 BOD1L1Q8NFC6 3051 aa5.22□□□□□ -1.57
HMBOX1-211ENST00000524238 PTPRZ1P23471 2315 aaPredicted RBP5.21□□□□□ -1.57
HMBOX1-211ENST00000524238 A0A096LNT2 108 aa5.21□□□□□ -1.58
HMBOX1-211ENST00000524238 F8WEM9 126 aa5.21□□□□□ -1.58
HMBOX1-211ENST00000524238 FSHBP01225 129 aa5.21□□□□□ -1.58
HMBOX1-211ENST00000524238 LOC100131303A0A0U1RQF7 123 aa5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 RNASE1P07998 156 aaKnown RBP5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 CD164L2Q6UWJ8 174 aa5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 C18orf65Q6ZTR6 163 aa5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 PLAC8L1A1L4L8 177 aa5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 CCL24O00175 119 aa5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 MIFP14174 115 aa5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 C11orf68Q9H3H3 251 aaKnown RBP5.2□□□□□ -1.58
HMBOX1-211ENST00000524238 MGAQ8IWI9 3026 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 ASPMQ8IZT6 3477 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 TRBV7-6A0A0J9YX20 115 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 LINC00336Q6ZUF6 198 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 Q8N3U1 123 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 C1orf43Q9BWL3 253 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 PTPRQQ9UMZ3 2332 aa5.19□□□□□ -1.58
HMBOX1-211ENST00000524238 SORL1Q92673 2214 aa5.18□□□□□ -1.58
HMBOX1-211ENST00000524238 HRNRQ86YZ3 2850 aaPredicted RBP5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms