RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 RNF151Q2KHN1 245 aa11.52□□□□□ -0.57
PTP4A3-206ENST00000524028 OR10D4PQ8NGN7 298 aa11.52□□□□□ -0.57
PTP4A3-206ENST00000524028 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
PTP4A3-206ENST00000524028 IGHV3OR16-9A0A0B4J2B5 98 aa11.51□□□□□ -0.57
PTP4A3-206ENST00000524028 TCAPO15273 167 aa11.51□□□□□ -0.57
PTP4A3-206ENST00000524028 NPYP01303 97 aa11.51□□□□□ -0.57
PTP4A3-206ENST00000524028 MRPL54Q6P161 138 aaKnown RBP11.51□□□□□ -0.57
PTP4A3-206ENST00000524028 ORAOV1Q8WV07 137 aa11.51□□□□□ -0.57
PTP4A3-206ENST00000524028 A0A1B0GVG6 124 aa11.5□□□□□ -0.57
PTP4A3-206ENST00000524028 A0A1B0GXF2 115 aa11.5□□□□□ -0.57
PTP4A3-206ENST00000524028 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
PTP4A3-206ENST00000524028 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
PTP4A3-206ENST00000524028 MRPL35Q9NZE8 188 aaKnown RBP11.5□□□□□ -0.57
PTP4A3-206ENST00000524028 MT-ND6P03923 174 aa11.49□□□□□ -0.57
PTP4A3-206ENST00000524028 HBBP68871 147 aa11.49□□□□□ -0.57
PTP4A3-206ENST00000524028 MRPS36P82909 103 aaKnown RBP11.49□□□□□ -0.57
PTP4A3-206ENST00000524028 PEA15Q15121 130 aa11.49□□□□□ -0.57
PTP4A3-206ENST00000524028 C1orf137Q5JT78 98 aa11.48□□□□□ -0.57
PTP4A3-206ENST00000524028 FAM168BA1KXE4 195 aa11.47□□□□□ -0.57
PTP4A3-206ENST00000524028 F8W036 122 aa11.47□□□□□ -0.57
PTP4A3-206ENST00000524028 UNQ6190/PRO20217Q6UXQ8 127 aa11.47□□□□□ -0.57
PTP4A3-206ENST00000524028 KRTAP11-1Q8IUC1 163 aa11.47□□□□□ -0.57
PTP4A3-206ENST00000524028 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
PTP4A3-206ENST00000524028 F8WDY8 70 aa11.46□□□□□ -0.57
PTP4A3-206ENST00000524028 C6orf48Q9UBA6 75 aa11.46□□□□□ -0.57
PTP4A3-206ENST00000524028 NDUFA1O15239 70 aa11.45□□□□□ -0.58
PTP4A3-206ENST00000524028 S100A8P05109 93 aa11.45□□□□□ -0.58
PTP4A3-206ENST00000524028 IMMP2LQ96T52 175 aa11.45□□□□□ -0.58
PTP4A3-206ENST00000524028 PPBPP02775 128 aa11.44□□□□□ -0.58
PTP4A3-206ENST00000524028 TLX1NBP0CAT3 122 aa11.44□□□□□ -0.58
PTP4A3-206ENST00000524028 SMDT1Q9H4I9 107 aa11.44□□□□□ -0.58
PTP4A3-206ENST00000524028 KIAA0087Q14695 138 aa11.43□□□□□ -0.58
PTP4A3-206ENST00000524028 KRTAP7-1Q8IUC3 87 aa11.43□□□□□ -0.58
PTP4A3-206ENST00000524028 A0A087WZ39 114 aa11.42□□□□□ -0.58
PTP4A3-206ENST00000524028 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
PTP4A3-206ENST00000524028 LINC00242Q5T6M2 205 aa11.42□□□□□ -0.58
PTP4A3-206ENST00000524028 TMEM136Q6ZRR5 245 aa11.42□□□□□ -0.58
PTP4A3-206ENST00000524028 ORMDL3Q8N138 153 aa11.42□□□□□ -0.58
PTP4A3-206ENST00000524028 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 RAB5AP20339 215 aa11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 FAM19A5Q7Z5A7 132 aaPredicted RBP11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 PRELID3AQ96N28 172 aa11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 PYGO1Q9Y3Y4 419 aa11.41□□□□□ -0.58
PTP4A3-206ENST00000524028 TGIF2-C20orf24A0A0A6YYL0 155 aa11.4□□□□□ -0.58
PTP4A3-206ENST00000524028 IFI27P40305 119 aaPredicted RBP11.4□□□□□ -0.58
PTP4A3-206ENST00000524028 ATP5L2Q7Z4Y8 100 aa11.39□□□□□ -0.59
PTP4A3-206ENST00000524028 PRR26Q8N8Z3 221 aa11.39□□□□□ -0.59
PTP4A3-206ENST00000524028 PRSS47A8MTI9 375 aa11.38□□□□□ -0.59
PTP4A3-206ENST00000524028 C2orf82Q6UX34 121 aa11.38□□□□□ -0.59
PTP4A3-206ENST00000524028 DIRC1Q969H9 104 aa11.38□□□□□ -0.59
PTP4A3-206ENST00000524028 LOC389332A0A1B0GUA5 103 aa11.37□□□□□ -0.59
PTP4A3-206ENST00000524028 ZC2HC1BQ5TFG8 222 aa11.37□□□□□ -0.59
PTP4A3-206ENST00000524028 TMEM141Q96I45 108 aa11.37□□□□□ -0.59
PTP4A3-206ENST00000524028 H0Y9J4 135 aa11.36□□□□□ -0.59
PTP4A3-206ENST00000524028 UBE2D1P51668 147 aa11.36□□□□□ -0.59
PTP4A3-206ENST00000524028 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
PTP4A3-206ENST00000524028 C9orf129Q5T035 196 aaKnown RBP11.35□□□□□ -0.59
PTP4A3-206ENST00000524028 LPAP08519 4548 aa11.34□□□□□ -0.59
PTP4A3-206ENST00000524028 M0QXV9 152 aa11.34□□□□□ -0.59
PTP4A3-206ENST00000524028 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
PTP4A3-206ENST00000524028 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
PTP4A3-206ENST00000524028 NDUFC2-KCTD14E9PQ53 114 aa11.33□□□□□ -0.6
PTP4A3-206ENST00000524028 C2orf66Q6UXQ4 117 aa11.33□□□□□ -0.6
PTP4A3-206ENST00000524028 MAP1LC3AQ9H492 121 aa11.33□□□□□ -0.6
PTP4A3-206ENST00000524028 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
PTP4A3-206ENST00000524028 KRTAP1-4P0C5Y4 121 aa11.32□□□□□ -0.6
PTP4A3-206ENST00000524028 LINC01561Q8N1V8 128 aa11.32□□□□□ -0.6
PTP4A3-206ENST00000524028 Q8N8P6 123 aa11.32□□□□□ -0.6
PTP4A3-206ENST00000524028 AMELXQ99217 191 aa11.32□□□□□ -0.6
PTP4A3-206ENST00000524028 UBE2BP63146 152 aa11.31□□□□□ -0.6
PTP4A3-206ENST00000524028 PACRGQ96M98 296 aaPredicted RBP11.31□□□□□ -0.6
PTP4A3-206ENST00000524028 CYSLTR1Q9Y271 337 aa11.31□□□□□ -0.6
PTP4A3-206ENST00000524028 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
PTP4A3-206ENST00000524028 IGIPA6NJ69 53 aa11.29□□□□□ -0.6
PTP4A3-206ENST00000524028 VCX2Q9H322 139 aa11.29□□□□□ -0.6
PTP4A3-206ENST00000524028 Q6ZN92 141 aa11.28□□□□□ -0.6
PTP4A3-206ENST00000524028 IGLV1-50A0A075B6I6 118 aa11.27□□□□□ -0.61
PTP4A3-206ENST00000524028 PNRC1Q12796 327 aaPredicted RBP11.27□□□□□ -0.61
PTP4A3-206ENST00000524028 ORMDL2Q53FV1 153 aa11.27□□□□□ -0.61
PTP4A3-206ENST00000524028 FAM19A3Q7Z5A8 133 aa11.27□□□□□ -0.61
PTP4A3-206ENST00000524028 ANAPC16Q96DE5 110 aa11.27□□□□□ -0.61
PTP4A3-206ENST00000524028 TOMM7Q9P0U1 55 aa11.27□□□□□ -0.61
PTP4A3-206ENST00000524028 MT-ND4LP03901 98 aa11.26□□□□□ -0.61
PTP4A3-206ENST00000524028 PRSS2P07478 247 aa11.26□□□□□ -0.61
PTP4A3-206ENST00000524028 NPSP0C0P6 89 aa11.26□□□□□ -0.61
PTP4A3-206ENST00000524028 LINC00469Q8N7U9 141 aa11.26□□□□□ -0.61
PTP4A3-206ENST00000524028 CKS1BP61024 79 aa11.25□□□□□ -0.61
PTP4A3-206ENST00000524028 C6orf226Q5I0X4 101 aa11.25□□□□□ -0.61
PTP4A3-206ENST00000524028 Q8IZM0 81 aa11.25□□□□□ -0.61
PTP4A3-206ENST00000524028 CDKN2A-AS1Q9UH64 79 aa11.24□□□□□ -0.61
PTP4A3-206ENST00000524028 C22orf24Q9Y442 160 aa11.24□□□□□ -0.61
PTP4A3-206ENST00000524028 K7EMI3 77 aa11.23□□□□□ -0.61
PTP4A3-206ENST00000524028 ALKBH7Q9BT30 221 aaPredicted RBP11.23□□□□□ -0.61
PTP4A3-206ENST00000524028 XAGE1AQ9HD64 81 aa11.23□□□□□ -0.61
PTP4A3-206ENST00000524028 NXT2Q9NPJ8 142 aaKnown RBP11.22□□□□□ -0.61
PTP4A3-206ENST00000524028 ZNF861PO60384 105 aa11.21□□□□□ -0.61
PTP4A3-206ENST00000524028 HERVK_113P63121 156 aa11.21□□□□□ -0.61
PTP4A3-206ENST00000524028 CTDSP1Q9GZU7 261 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms