RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CLLU1Q5K131 121 aa10.19□□□□□ -0.78
CLN8-206ENST00000523237 SERTAD4-AS1Q5TG53 156 aa10.19□□□□□ -0.78
CLN8-206ENST00000523237 PKHD1L1Q86WI1 4243 aa10.18□□□□□ -0.78
CLN8-206ENST00000523237 PTTG1IPP53801 180 aa10.18□□□□□ -0.78
CLN8-206ENST00000523237 SPAG11BQ08648 103 aa10.18□□□□□ -0.78
CLN8-206ENST00000523237 OR10D4PQ8NGN7 298 aa10.18□□□□□ -0.78
CLN8-206ENST00000523237 MAP1LC3AQ9H492 121 aa10.18□□□□□ -0.78
CLN8-206ENST00000523237 IGHV3OR16-9A0A0B4J2B5 98 aa10.17□□□□□ -0.78
CLN8-206ENST00000523237 GAGE2BQ13066 116 aa10.17□□□□□ -0.78
CLN8-206ENST00000523237 PYGO1Q9Y3Y4 419 aa10.17□□□□□ -0.78
CLN8-206ENST00000523237 LOC389332A0A1B0GUA5 103 aa10.16□□□□□ -0.78
CLN8-206ENST00000523237 PRR3P79522 188 aaKnown RBP10.16□□□□□ -0.78
CLN8-206ENST00000523237 FAT3Q8TDW7 4589 aa10.16□□□□□ -0.78
CLN8-206ENST00000523237 RNF151Q2KHN1 245 aa10.15□□□□□ -0.78
CLN8-206ENST00000523237 ORAOV1Q8WV07 137 aa10.15□□□□□ -0.78
CLN8-206ENST00000523237 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 TGIF2-C20orf24A0A0A6YYL0 155 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 F8WDY8 70 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.14□□□□□ -0.79
CLN8-206ENST00000523237 UQCC3Q6UW78 93 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 Q8N8P6 123 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 TMEM141Q96I45 108 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 IMMP2LQ96T52 175 aa10.14□□□□□ -0.79
CLN8-206ENST00000523237 RPL18AQ02543 176 aaKnown RBP10.13□□□□□ -0.79
CLN8-206ENST00000523237 TEX43Q6ZNM6 134 aa10.13□□□□□ -0.79
CLN8-206ENST00000523237 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
CLN8-206ENST00000523237 CYSLTR1Q9Y271 337 aa10.13□□□□□ -0.79
CLN8-206ENST00000523237 K7EMI3 77 aa10.12□□□□□ -0.79
CLN8-206ENST00000523237 NDUFA1O15239 70 aa10.12□□□□□ -0.79
CLN8-206ENST00000523237 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
CLN8-206ENST00000523237 C2orf66Q6UXQ4 117 aa10.12□□□□□ -0.79
CLN8-206ENST00000523237 MRPL35Q9NZE8 188 aaKnown RBP10.12□□□□□ -0.79
CLN8-206ENST00000523237 A0A087WZ39 114 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 A0A0J9YXV3 536 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 TMEM218A2RU14 115 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 MT1HL1P0DM35 61 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 ADCYAP1P18509 176 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 LINC00242Q5T6M2 205 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 Q6ZN92 141 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 Q6ZRP5 223 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
CLN8-206ENST00000523237 NXT2Q9NPJ8 142 aaKnown RBP10.11□□□□□ -0.79
CLN8-206ENST00000523237 A0A1W2PNN7 141 aa10.09□□□□□ -0.79
CLN8-206ENST00000523237 IFITM2Q01629 132 aa10.09□□□□□ -0.79
CLN8-206ENST00000523237 C9orf116Q5BN46 136 aaPredicted RBP10.09□□□□□ -0.79
CLN8-206ENST00000523237 TRAV9-1A0A075B6T8 112 aa10.08□□□□□ -0.8
CLN8-206ENST00000523237 NPSP0C0P6 89 aa10.08□□□□□ -0.8
CLN8-206ENST00000523237 UBE2D1P51668 147 aa10.08□□□□□ -0.8
CLN8-206ENST00000523237 SPINK6Q6UWN8 80 aa10.08□□□□□ -0.8
CLN8-206ENST00000523237 UNQ6190/PRO20217Q6UXQ8 127 aa10.08□□□□□ -0.8
CLN8-206ENST00000523237 VCX2Q9H322 139 aa10.08□□□□□ -0.8
CLN8-206ENST00000523237 G0S2P27469 103 aa10.07□□□□□ -0.8
CLN8-206ENST00000523237 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
CLN8-206ENST00000523237 AMELXQ99217 191 aa10.07□□□□□ -0.8
CLN8-206ENST00000523237 PLA2G2DQ9UNK4 145 aa10.07□□□□□ -0.8
CLN8-206ENST00000523237 IGIPA6NJ69 53 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 TLX1NBP0CAT3 122 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 KIAA0087Q14695 138 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 KIAA1644Q3SXP7 199 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 PAPPA-AS1Q5QFB9 102 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 LINC00173Q6ZV60 143 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 LINC01561Q8N1V8 128 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 SEC11CQ9BY50 192 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
CLN8-206ENST00000523237 S100PP25815 95 aa10.05□□□□□ -0.8
CLN8-206ENST00000523237 ZC2HC1BQ5TFG8 222 aa10.05□□□□□ -0.8
CLN8-206ENST00000523237 LINC01600Q96MT4 127 aa10.05□□□□□ -0.8
CLN8-206ENST00000523237 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
CLN8-206ENST00000523237 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
CLN8-206ENST00000523237 SEC11AP67812 179 aa10.03□□□□□ -0.8
CLN8-206ENST00000523237 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLN8-206ENST00000523237 TIMM17AQ99595 171 aa10.03□□□□□ -0.8
CLN8-206ENST00000523237 MT-ND6P03923 174 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 PRSS2P07478 247 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 C2orf82Q6UX34 121 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
CLN8-206ENST00000523237 FAM19A3Q7Z5A8 133 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 COMMD7Q86VX2 200 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 TOMM6Q96B49 74 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 PACRGQ96M98 296 aaPredicted RBP10.02□□□□□ -0.81
CLN8-206ENST00000523237 GNB1LQ9BYB4 327 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.81
CLN8-206ENST00000523237 HERVK_113P63121 156 aa10.01□□□□□ -0.81
CLN8-206ENST00000523237 COX19Q49B96 90 aa10.01□□□□□ -0.81
CLN8-206ENST00000523237 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
CLN8-206ENST00000523237 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
CLN8-206ENST00000523237 HMCN2Q8NDA2 5059 aa10□□□□□ -0.81
CLN8-206ENST00000523237 TOMM7Q9P0U1 55 aa10□□□□□ -0.81
CLN8-206ENST00000523237 FAM168BA1KXE4 195 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 CKS1BP61024 79 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 ERASQ7Z444 233 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 FAM19A5Q7Z5A7 132 aaPredicted RBP9.99□□□□□ -0.81
CLN8-206ENST00000523237 Q8IZM0 81 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 SCGB3A1Q96QR1 104 aa9.99□□□□□ -0.81
CLN8-206ENST00000523237 ALKBH7Q9BT30 221 aaPredicted RBP9.99□□□□□ -0.81
CLN8-206ENST00000523237 GEMIN7Q9H840 131 aaKnown RBP9.99□□□□□ -0.81
CLN8-206ENST00000523237 C6orf226Q5I0X4 101 aa9.98□□□□□ -0.81
CLN8-206ENST00000523237 C1orf137Q5JT78 98 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms