RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 PKIGQ9Y2B9 76 aa13.51□□□□□ -0.25
HOXA3-204ENST00000521401 PYGO1Q9Y3Y4 419 aa13.51□□□□□ -0.25
HOXA3-204ENST00000521401 HMCN2Q8NDA2 5059 aa13.5□□□□□ -0.25
HOXA3-204ENST00000521401 TMEM218A2RU14 115 aa13.5□□□□□ -0.25
HOXA3-204ENST00000521401 APOMO95445 188 aa13.5□□□□□ -0.25
HOXA3-204ENST00000521401 UQCC3Q6UW78 93 aa13.5□□□□□ -0.25
HOXA3-204ENST00000521401 C7orf33Q8WU49 177 aa13.5□□□□□ -0.25
HOXA3-204ENST00000521401 MAP1LC3AQ9H492 121 aa13.5□□□□□ -0.25
HOXA3-204ENST00000521401 IGLV4-3A0A075B6K6 122 aa13.49□□□□□ -0.25
HOXA3-204ENST00000521401 IFITM10A6NMD0 228 aa13.49□□□□□ -0.25
HOXA3-204ENST00000521401 IFI27P40305 119 aaPredicted RBP13.49□□□□□ -0.25
HOXA3-204ENST00000521401 Q8N8P6 123 aa13.49□□□□□ -0.25
HOXA3-204ENST00000521401 CAMK2N2Q96S95 79 aa13.49□□□□□ -0.25
HOXA3-204ENST00000521401 IMMP2LQ96T52 175 aa13.49□□□□□ -0.25
HOXA3-204ENST00000521401 PTTG1IPP53801 180 aa13.48□□□□□ -0.25
HOXA3-204ENST00000521401 SPAG11BQ08648 103 aa13.48□□□□□ -0.25
HOXA3-204ENST00000521401 LOC107984640A0A0U1RRK4 108 aa13.47□□□□□ -0.25
HOXA3-204ENST00000521401 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.47□□□□□ -0.25
HOXA3-204ENST00000521401 OR10D4PQ8NGN7 298 aa13.47□□□□□ -0.25
HOXA3-204ENST00000521401 GAGE2BQ13066 116 aa13.46□□□□□ -0.25
HOXA3-204ENST00000521401 PRR3P79522 188 aaKnown RBP13.45□□□□□ -0.26
HOXA3-204ENST00000521401 ORAOV1Q8WV07 137 aa13.45□□□□□ -0.26
HOXA3-204ENST00000521401 LINC00242Q5T6M2 205 aa13.44□□□□□ -0.26
HOXA3-204ENST00000521401 C2orf66Q6UXQ4 117 aa13.44□□□□□ -0.26
HOXA3-204ENST00000521401 TMEM141Q96I45 108 aa13.44□□□□□ -0.26
HOXA3-204ENST00000521401 CTDSP1Q9GZU7 261 aa13.44□□□□□ -0.26
HOXA3-204ENST00000521401 TNXBP22105 4242 aa13.44□□□□□ -0.26
HOXA3-204ENST00000521401 A0A0J9YXV3 536 aa13.43□□□□□ -0.26
HOXA3-204ENST00000521401 A0A1W2PNN7 141 aa13.43□□□□□ -0.26
HOXA3-204ENST00000521401 MT1HL1P0DM35 61 aa13.43□□□□□ -0.26
HOXA3-204ENST00000521401 RNF151Q2KHN1 245 aa13.43□□□□□ -0.26
HOXA3-204ENST00000521401 SEC11CQ9BY50 192 aa13.43□□□□□ -0.26
HOXA3-204ENST00000521401 CYSLTR1Q9Y271 337 aa13.43□□□□□ -0.26
HOXA3-204ENST00000521401 ZC2HC1BQ5TFG8 222 aa13.42□□□□□ -0.26
HOXA3-204ENST00000521401 MRPL35Q9NZE8 188 aaKnown RBP13.42□□□□□ -0.26
HOXA3-204ENST00000521401 A0A087WZ39 114 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 F8WDY8 70 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 UBE2D1P51668 147 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 KIAA1644Q3SXP7 199 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 ORMDL2Q53FV1 153 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 C10orf25Q5T742 122 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 LINC00173Q6ZV60 143 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 AMELXQ99217 191 aa13.41□□□□□ -0.26
HOXA3-204ENST00000521401 TRAV9-1A0A075B6T8 112 aa13.4□□□□□ -0.26
HOXA3-204ENST00000521401 TGIF2-C20orf24A0A0A6YYL0 155 aa13.4□□□□□ -0.26
HOXA3-204ENST00000521401 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
HOXA3-204ENST00000521401 K7EMI3 77 aa13.4□□□□□ -0.26
HOXA3-204ENST00000521401 KIAA0087Q14695 138 aa13.4□□□□□ -0.26
HOXA3-204ENST00000521401 TEX43Q6ZNM6 134 aa13.4□□□□□ -0.26
HOXA3-204ENST00000521401 NXT2Q9NPJ8 142 aaKnown RBP13.4□□□□□ -0.26
HOXA3-204ENST00000521401 RPL18AQ02543 176 aaKnown RBP13.38□□□□□ -0.27
HOXA3-204ENST00000521401 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
HOXA3-204ENST00000521401 UNQ6190/PRO20217Q6UXQ8 127 aa13.38□□□□□ -0.27
HOXA3-204ENST00000521401 COMMD7Q86VX2 200 aa13.38□□□□□ -0.27
HOXA3-204ENST00000521401 NDUFA1O15239 70 aa13.37□□□□□ -0.27
HOXA3-204ENST00000521401 NPSP0C0P6 89 aa13.37□□□□□ -0.27
HOXA3-204ENST00000521401 SERTAD4-AS1Q5TG53 156 aa13.37□□□□□ -0.27
HOXA3-204ENST00000521401 C6orf48Q9UBA6 75 aa13.37□□□□□ -0.27
HOXA3-204ENST00000521401 C10orf91Q5T1B1 145 aa13.36□□□□□ -0.27
HOXA3-204ENST00000521401 C2orf88Q9BSF0 95 aa13.36□□□□□ -0.27
HOXA3-204ENST00000521401 VCX2Q9H322 139 aa13.36□□□□□ -0.27
HOXA3-204ENST00000521401 TLX1NBP0CAT3 122 aa13.35□□□□□ -0.27
HOXA3-204ENST00000521401 Q6ZN92 141 aa13.35□□□□□ -0.27
HOXA3-204ENST00000521401 LINC01561Q8N1V8 128 aa13.35□□□□□ -0.27
HOXA3-204ENST00000521401 Q6ZRP5 223 aa13.34□□□□□ -0.27
HOXA3-204ENST00000521401 FAM19A3Q7Z5A8 133 aa13.34□□□□□ -0.27
HOXA3-204ENST00000521401 GNB1LQ9BYB4 327 aa13.34□□□□□ -0.27
HOXA3-204ENST00000521401 SRSF9Q13242 221 aaKnown RBP eCLIP13.33□□□□□ -0.28
HOXA3-204ENST00000521401 TOMM6Q96B49 74 aa13.33□□□□□ -0.28
HOXA3-204ENST00000521401 S100PP25815 95 aa13.32□□□□□ -0.28
HOXA3-204ENST00000521401 TIMM17AQ99595 171 aa13.32□□□□□ -0.28
HOXA3-204ENST00000521401 C2orf82Q6UX34 121 aa13.31□□□□□ -0.28
HOXA3-204ENST00000521401 ALKBH7Q9BT30 221 aaPredicted RBP13.31□□□□□ -0.28
HOXA3-204ENST00000521401 CARHSP1Q9Y2V2 147 aaKnown RBP13.31□□□□□ -0.28
HOXA3-204ENST00000521401 G0S2P27469 103 aa13.3□□□□□ -0.28
HOXA3-204ENST00000521401 SPINK6Q6UWN8 80 aa13.3□□□□□ -0.28
HOXA3-204ENST00000521401 PHF5AQ7RTV0 110 aaKnown RBP13.3□□□□□ -0.28
HOXA3-204ENST00000521401 LINC01546A6NGU7 62 aa13.29□□□□□ -0.28
HOXA3-204ENST00000521401 FAM168BA1KXE4 195 aa13.28□□□□□ -0.28
HOXA3-204ENST00000521401 LINC01600Q96MT4 127 aa13.28□□□□□ -0.28
HOXA3-204ENST00000521401 TRBV30A0A0K0K1B3 111 aa13.27□□□□□ -0.29
HOXA3-204ENST00000521401 RHEBQ15382 184 aa13.27□□□□□ -0.29
HOXA3-204ENST00000521401 PAPPA-AS1Q5QFB9 102 aa13.27□□□□□ -0.29
HOXA3-204ENST00000521401 ERASQ7Z444 233 aa13.27□□□□□ -0.29
HOXA3-204ENST00000521401 KRTAP7-1Q8IUC3 87 aa13.27□□□□□ -0.29
HOXA3-204ENST00000521401 PSORS1C2Q9UIG4 136 aa13.27□□□□□ -0.29
HOXA3-204ENST00000521401 COX19Q49B96 90 aa13.26□□□□□ -0.29
HOXA3-204ENST00000521401 GAGE2EQ4V326 116 aa13.26□□□□□ -0.29
HOXA3-204ENST00000521401 RPS10P5Q9NQ39 176 aa13.26□□□□□ -0.29
HOXA3-204ENST00000521401 GAGE2DQ9UEU5 116 aa13.26□□□□□ -0.29
HOXA3-204ENST00000521401 CDKN2A-AS1Q9UH64 79 aa13.26□□□□□ -0.29
HOXA3-204ENST00000521401 HERVK_113P63121 156 aa13.25□□□□□ -0.29
HOXA3-204ENST00000521401 SCGB3A1Q96QR1 104 aa13.25□□□□□ -0.29
HOXA3-204ENST00000521401 MRPL18Q9H0U6 180 aaKnown RBP13.25□□□□□ -0.29
HOXA3-204ENST00000521401 MT-ND6P03923 174 aa13.24□□□□□ -0.29
HOXA3-204ENST00000521401 SEC11AP67812 179 aa13.24□□□□□ -0.29
HOXA3-204ENST00000521401 KRTAP11-1Q8IUC1 163 aa13.24□□□□□ -0.29
HOXA3-204ENST00000521401 NDUFC2-KCTD14E9PQ53 114 aa13.23□□□□□ -0.29
HOXA3-204ENST00000521401 FABP9Q0Z7S8 132 aa13.23□□□□□ -0.29
HOXA3-204ENST00000521401 Q8IZM0 81 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms