RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 A4D1N5 150 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 LINC01546A6NGU7 62 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 I3L3M4 83 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 ATP5G1P05496 136 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 ESDP10768 282 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 FCER1GP30273 86 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 CRYBA4P53673 196 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 POLR2KP53803 58 aaKnown RBP2.6□□□□□ -1.99
CLK4-207ENST00000520909 RPL32P62910 135 aaKnown RBP2.6□□□□□ -1.99
CLK4-207ENST00000520909 LAGE3Q14657 143 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 RHOHQ15669 191 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 OR10D4PQ8NGN7 298 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 DNAJC30Q96LL9 226 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 C18orf15Q96N68 181 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 KIR2DL4Q99706 377 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 EDA2RQ9HAV5 297 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 PRO0255Q9UI72 69 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 DNAH7Q8WXX0 4024 aa2.6□□□□□ -1.99
CLK4-207ENST00000520909 MEGF8Q7Z7M0 2845 aa2.59□□□□□ -1.99
CLK4-207ENST00000520909 TRBV7-3A0A075B6L6 115 aa2.59□□□□□ -2
CLK4-207ENST00000520909 TRAV26-1A0A087WT03 109 aa2.59□□□□□ -2
CLK4-207ENST00000520909 LEPROTL1O95214 131 aa2.59□□□□□ -2
CLK4-207ENST00000520909 HBDP02042 147 aa2.59□□□□□ -2
CLK4-207ENST00000520909 KRTDAPP60985 99 aa2.59□□□□□ -2
CLK4-207ENST00000520909 UBE2D3P61077 147 aa2.59□□□□□ -2
CLK4-207ENST00000520909 UBE2D2P62837 147 aa2.59□□□□□ -2
CLK4-207ENST00000520909 COTL1Q14019 142 aa2.59□□□□□ -2
CLK4-207ENST00000520909 ORMDL2Q53FV1 153 aa2.59□□□□□ -2
CLK4-207ENST00000520909 LINC00173Q6ZV60 143 aa2.59□□□□□ -2
CLK4-207ENST00000520909 PACRGQ96M98 296 aaPredicted RBP2.59□□□□□ -2
CLK4-207ENST00000520909 HSPB8Q9UJY1 196 aa2.59□□□□□ -2
CLK4-207ENST00000520909 STAB2Q8WWQ8 2551 aa2.59□□□□□ -2
CLK4-207ENST00000520909 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -2
CLK4-207ENST00000520909 A0A096LNJ9 63 aa2.58□□□□□ -2
CLK4-207ENST00000520909 DEFB131BA0A096LNP1 70 aa2.58□□□□□ -2
CLK4-207ENST00000520909 A0A096LPF7 62 aa2.58□□□□□ -2
CLK4-207ENST00000520909 H0Y8G0 127 aa2.58□□□□□ -2
CLK4-207ENST00000520909 K7EMI3 77 aa2.58□□□□□ -2
CLK4-207ENST00000520909 G0S2P27469 103 aa2.58□□□□□ -2
CLK4-207ENST00000520909 KRTAP10-10P60014 251 aa2.58□□□□□ -2
CLK4-207ENST00000520909 RPL39P62891 51 aaKnown RBP2.58□□□□□ -2
CLK4-207ENST00000520909 Q6ZVQ6 151 aa2.58□□□□□ -2
CLK4-207ENST00000520909 DAZ4Q86SG3 579 aaKnown RBP2.58□□□□□ -2
CLK4-207ENST00000520909 ATP6V0E2Q8NHE4 81 aa2.58□□□□□ -2
CLK4-207ENST00000520909 TOMM6Q96B49 74 aa2.58□□□□□ -2
CLK4-207ENST00000520909 VSIG2Q96IQ7 327 aa2.58□□□□□ -2
CLK4-207ENST00000520909 SCGB3A1Q96QR1 104 aa2.58□□□□□ -2
CLK4-207ENST00000520909 MAP1LC3CQ9BXW4 147 aa2.58□□□□□ -2
CLK4-207ENST00000520909 DAZ3Q9NR90 486 aaKnown RBP2.58□□□□□ -2
CLK4-207ENST00000520909 CYSLTR1Q9Y271 337 aa2.58□□□□□ -2
CLK4-207ENST00000520909 COL7A1Q02388 2944 aa2.57□□□□□ -2
CLK4-207ENST00000520909 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.57□□□□□ -2
CLK4-207ENST00000520909 TRAV10A0A0B4J240 114 aa2.57□□□□□ -2
CLK4-207ENST00000520909 IGKV2-29A2NJV5 120 aaPredicted RBP2.57□□□□□ -2
CLK4-207ENST00000520909 ATP5LO75964 103 aa2.57□□□□□ -2
CLK4-207ENST00000520909 C3orf79P0CE67 100 aa2.57□□□□□ -2
CLK4-207ENST00000520909 LINC00694P0DN24 101 aa2.57□□□□□ -2
CLK4-207ENST00000520909 MRPL23Q16540 153 aaKnown RBP2.57□□□□□ -2
CLK4-207ENST00000520909 TMEM97Q5BJF2 176 aa2.57□□□□□ -2
CLK4-207ENST00000520909 C2orf66Q6UXQ4 117 aa2.57□□□□□ -2
CLK4-207ENST00000520909 NTM-AS1Q6ZSK4 140 aa2.57□□□□□ -2
CLK4-207ENST00000520909 C20orf203Q8NBC4 194 aa2.57□□□□□ -2
CLK4-207ENST00000520909 IFI27L1Q96BM0 104 aa2.57□□□□□ -2
CLK4-207ENST00000520909 TMEM243Q9BU79 118 aa2.57□□□□□ -2
CLK4-207ENST00000520909 CHCHD7Q9BUK0 85 aa2.57□□□□□ -2
CLK4-207ENST00000520909 GTSF1LQ9H1H1 148 aa2.57□□□□□ -2
CLK4-207ENST00000520909 ICOSQ9Y6W8 199 aa2.57□□□□□ -2
CLK4-207ENST00000520909 TRBV25-1A0A075B6N4 114 aa2.56□□□□□ -2
CLK4-207ENST00000520909 TRBV6-8A0A0A6YYG3 113 aa2.56□□□□□ -2
CLK4-207ENST00000520909 C20orf202A1L168 122 aa2.56□□□□□ -2
CLK4-207ENST00000520909 LINC01549A6NIU2 74 aa2.56□□□□□ -2
CLK4-207ENST00000520909 IGIPA6NJ69 53 aa2.56□□□□□ -2
CLK4-207ENST00000520909 TMEM262E9PQX1 116 aa2.56□□□□□ -2
CLK4-207ENST00000520909 H3BNG1 76 aa2.56□□□□□ -2
CLK4-207ENST00000520909 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.56□□□□□ -2
CLK4-207ENST00000520909 SYS1-DBNDD2H3BUS1 97 aa2.56□□□□□ -2
CLK4-207ENST00000520909 UBE2L6O14933 153 aa2.56□□□□□ -2
CLK4-207ENST00000520909 AMMECR1LQ6DCA0 310 aa2.56□□□□□ -2
CLK4-207ENST00000520909 Q6ZN92 141 aa2.56□□□□□ -2
CLK4-207ENST00000520909 ERASQ7Z444 233 aa2.56□□□□□ -2
CLK4-207ENST00000520909 TMEM141Q96I45 108 aa2.56□□□□□ -2
CLK4-207ENST00000520909 DHRS4-AS1Q9P1J3 65 aa2.56□□□□□ -2
CLK4-207ENST00000520909 PLECQ15149 4684 aaKnown RBP2.55□□□□□ -2
CLK4-207ENST00000520909 IGLL5B9A064 214 aa2.55□□□□□ -2
CLK4-207ENST00000520909 FGF6P10767 208 aa2.55□□□□□ -2
CLK4-207ENST00000520909 SMAGPQ0VAQ4 97 aa2.55□□□□□ -2
CLK4-207ENST00000520909 JOSD1Q15040 202 aaPredicted RBP2.55□□□□□ -2
CLK4-207ENST00000520909 RNASE13Q5GAN3 156 aaKnown RBP2.55□□□□□ -2
CLK4-207ENST00000520909 PYY3Q5JQD4 70 aa2.55□□□□□ -2
CLK4-207ENST00000520909 CEMP1Q6PRD7 247 aaPredicted RBP2.55□□□□□ -2
CLK4-207ENST00000520909 LYPD5Q6UWN5 251 aa2.55□□□□□ -2
CLK4-207ENST00000520909 SPATA12Q7Z6I5 190 aa2.55□□□□□ -2
CLK4-207ENST00000520909 ATOH7Q8N100 152 aa2.55□□□□□ -2
CLK4-207ENST00000520909 Q8N976 141 aa2.55□□□□□ -2
CLK4-207ENST00000520909 OR5A1Q8NGJ0 315 aa2.55□□□□□ -2
CLK4-207ENST00000520909 BAALCQ8WXS3 180 aa2.55□□□□□ -2
CLK4-207ENST00000520909 TMEM101Q96IK0 257 aa2.55□□□□□ -2
CLK4-207ENST00000520909 TIMM17AQ99595 171 aa2.55□□□□□ -2
CLK4-207ENST00000520909 PMCHL2Q9BQD1 86 aa2.55□□□□□ -2
CLK4-207ENST00000520909 VCX2Q9H322 139 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms