RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 K7EQG2 157 aa9.54□□□□□ -0.88
PABPC1-208ENST00000519004 Q8NA96 180 aa9.54□□□□□ -0.88
PABPC1-208ENST00000519004 LINC01560Q8TB33 94 aa9.54□□□□□ -0.88
PABPC1-208ENST00000519004 TMEM256-PLSCR3K7ERE1 68 aa9.54□□□□□ -0.88
PABPC1-208ENST00000519004 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
PABPC1-208ENST00000519004 MUC3AQ02505 3323 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 Q8N814 137 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 TRBV6-4A0A1B0GX49 114 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 H3BUA1 57 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 PAX4O43316 350 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 IL17DQ8TAD2 202 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 TM2D3Q9BRN9 247 aa9.53□□□□□ -0.88
PABPC1-208ENST00000519004 IBA57-AS1B1ANH7 110 aa9.52□□□□□ -0.89
PABPC1-208ENST00000519004 MIFP14174 115 aa9.52□□□□□ -0.89
PABPC1-208ENST00000519004 A0A096LNT2 108 aa9.52□□□□□ -0.89
PABPC1-208ENST00000519004 Q6ZQT0 140 aa9.51□□□□□ -0.89
PABPC1-208ENST00000519004 TOMM7Q9P0U1 55 aa9.51□□□□□ -0.89
PABPC1-208ENST00000519004 M0R2N4 97 aa9.51□□□□□ -0.89
PABPC1-208ENST00000519004 NTM-AS1Q6ZSK4 140 aa9.51□□□□□ -0.89
PABPC1-208ENST00000519004 BSNQ9UPA5 3926 aa9.5□□□□□ -0.89
PABPC1-208ENST00000519004 NCOR1O75376 2440 aa9.5□□□□□ -0.89
PABPC1-208ENST00000519004 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
PABPC1-208ENST00000519004 Q6ZVQ6 151 aa9.5□□□□□ -0.89
PABPC1-208ENST00000519004 K7EQD1 137 aa9.49□□□□□ -0.89
PABPC1-208ENST00000519004 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
PABPC1-208ENST00000519004 HAMPP81172 84 aa9.49□□□□□ -0.89
PABPC1-208ENST00000519004 SPTBN1Q01082 2364 aaKnown RBP9.48□□□□□ -0.89
PABPC1-208ENST00000519004 Q8N3U1 123 aa9.48□□□□□ -0.89
PABPC1-208ENST00000519004 PMAIP1Q13794 54 aa9.47□□□□□ -0.89
PABPC1-208ENST00000519004 MAP1BP46821 2468 aaKnown RBP9.47□□□□□ -0.89
PABPC1-208ENST00000519004 LOC110117498A0A087WWA1 95 aa9.46□□□□□ -0.89
PABPC1-208ENST00000519004 IGLV1-40P01703 118 aa9.46□□□□□ -0.89
PABPC1-208ENST00000519004 GRNP28799 593 aaKnown RBP9.46□□□□□ -0.89
PABPC1-208ENST00000519004 CXCL6P80162 114 aa9.46□□□□□ -0.89
PABPC1-208ENST00000519004 C11orf71Q6IPW1 123 aa9.46□□□□□ -0.89
PABPC1-208ENST00000519004 PRR15Q8IV56 129 aa9.46□□□□□ -0.89
PABPC1-208ENST00000519004 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.9
PABPC1-208ENST00000519004 TMEM254Q8TBM7 123 aa9.46□□□□□ -0.9
PABPC1-208ENST00000519004 PLAC8L1A1L4L8 177 aa9.45□□□□□ -0.9
PABPC1-208ENST00000519004 ESRGQ1W209 222 aa9.45□□□□□ -0.9
PABPC1-208ENST00000519004 ATMQ13315 3056 aa9.45□□□□□ -0.9
PABPC1-208ENST00000519004 NREPQ16612 68 aa9.45□□□□□ -0.9
PABPC1-208ENST00000519004 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
PABPC1-208ENST00000519004 ASH1LQ9NR48 2969 aaKnown RBP9.44□□□□□ -0.9
PABPC1-208ENST00000519004 C6orf226Q5I0X4 101 aa9.43□□□□□ -0.9
PABPC1-208ENST00000519004 Q6ZRU5 148 aa9.43□□□□□ -0.9
PABPC1-208ENST00000519004 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
PABPC1-208ENST00000519004 LY6EQ16553 131 aa9.43□□□□□ -0.9
PABPC1-208ENST00000519004 C1orf158Q8N1D5 194 aa9.43□□□□□ -0.9
PABPC1-208ENST00000519004 ZNF843Q8N446 348 aa9.43□□□□□ -0.9
PABPC1-208ENST00000519004 TRBV10-1A0A0K0K1A3 114 aa9.42□□□□□ -0.9
PABPC1-208ENST00000519004 SORL1Q92673 2214 aa9.42□□□□□ -0.9
PABPC1-208ENST00000519004 ERC2-IT1O76042 136 aa9.42□□□□□ -0.9
PABPC1-208ENST00000519004 C6orf223Q8N319 242 aa9.42□□□□□ -0.9
PABPC1-208ENST00000519004 A8MTW9 85 aa9.41□□□□□ -0.9
PABPC1-208ENST00000519004 Q6ZTC4 211 aa9.41□□□□□ -0.9
PABPC1-208ENST00000519004 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
PABPC1-208ENST00000519004 COL6A6A6NMZ7 2263 aa9.41□□□□□ -0.9
PABPC1-208ENST00000519004 AKAP13Q12802 2813 aa9.4□□□□□ -0.9
PABPC1-208ENST00000519004 A0A087WZ39 114 aa9.4□□□□□ -0.9
PABPC1-208ENST00000519004 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
PABPC1-208ENST00000519004 ZNF561-AS1K7EIQ3 104 aa9.4□□□□□ -0.9
PABPC1-208ENST00000519004 BRD3OSQ6XYD6 125 aa9.4□□□□□ -0.91
PABPC1-208ENST00000519004 SCXQ7RTU7 201 aa9.4□□□□□ -0.91
PABPC1-208ENST00000519004 HRNRQ86YZ3 2850 aaPredicted RBP9.39□□□□□ -0.91
PABPC1-208ENST00000519004 PRYO14603 147 aa9.39□□□□□ -0.91
PABPC1-208ENST00000519004 ANKHD1Q8IWZ3 2542 aaKnown RBP9.39□□□□□ -0.91
PABPC1-208ENST00000519004 IGKV3OR2-268A0A0C4DH90 116 aa9.39□□□□□ -0.91
PABPC1-208ENST00000519004 TMEM89A2RUT3 159 aa9.39□□□□□ -0.91
PABPC1-208ENST00000519004 UBE2L6O14933 153 aa9.39□□□□□ -0.91
PABPC1-208ENST00000519004 FUSP35637 526 aaKnown RBP eCLIP9.39□□□□□ -0.91
PABPC1-208ENST00000519004 BPY2O14599 106 aa9.38□□□□□ -0.91
PABPC1-208ENST00000519004 DEFB131AP59861 70 aa9.38□□□□□ -0.91
PABPC1-208ENST00000519004 BBC3Q96PG8 261 aaPredicted RBP9.38□□□□□ -0.91
PABPC1-208ENST00000519004 LMO4P61968 165 aa9.37□□□□□ -0.91
PABPC1-208ENST00000519004 LAMTOR3Q9UHA4 124 aa9.37□□□□□ -0.91
PABPC1-208ENST00000519004 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
PABPC1-208ENST00000519004 LINC00575Q6W349 94 aa9.37□□□□□ -0.91
PABPC1-208ENST00000519004 A6NDX4 124 aa9.36□□□□□ -0.91
PABPC1-208ENST00000519004 C19orf84I3L1E1 186 aa9.36□□□□□ -0.91
PABPC1-208ENST00000519004 C6orf99Q4VX62 202 aa9.36□□□□□ -0.91
PABPC1-208ENST00000519004 A0A1W2PRX2 142 aa9.35□□□□□ -0.91
PABPC1-208ENST00000519004 H3BUX3 64 aa9.35□□□□□ -0.91
PABPC1-208ENST00000519004 IGHV4-38-2P0DP08 117 aa9.35□□□□□ -0.91
PABPC1-208ENST00000519004 C11orf44Q8N8P7 122 aa9.35□□□□□ -0.91
PABPC1-208ENST00000519004 DEFB124Q8NES8 71 aa9.35□□□□□ -0.91
PABPC1-208ENST00000519004 SPATA3Q8NHX4 192 aa9.35□□□□□ -0.91
PABPC1-208ENST00000519004 GNLYP22749 145 aa9.34□□□□□ -0.91
PABPC1-208ENST00000519004 DYNLRB2Q8TF09 96 aa9.34□□□□□ -0.91
PABPC1-208ENST00000519004 IGLV4-60A0A075B6I1 120 aa9.34□□□□□ -0.91
PABPC1-208ENST00000519004 C10orf99Q6UWK7 81 aa9.34□□□□□ -0.91
PABPC1-208ENST00000519004 TRGV1A0A0A0MS02 117 aa9.33□□□□□ -0.92
PABPC1-208ENST00000519004 OCR1Q9BZK8 76 aa9.33□□□□□ -0.92
PABPC1-208ENST00000519004 PDE6GP18545 87 aa9.32□□□□□ -0.92
PABPC1-208ENST00000519004 CD164Q04900 197 aa9.32□□□□□ -0.92
PABPC1-208ENST00000519004 FBXL19-AS1Q494R0 122 aa9.32□□□□□ -0.92
PABPC1-208ENST00000519004 MUC7Q8TAX7 377 aa9.32□□□□□ -0.92
PABPC1-208ENST00000519004 hDV103S1A0JD37 113 aa9.32□□□□□ -0.92
PABPC1-208ENST00000519004 Q1T7F1 81 aa9.32□□□□□ -0.92
PABPC1-208ENST00000519004 Q6ZRP5 223 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms