RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 HIST3H2BBQ8N257 126 aa13.62□□□□□ -0.23
MTCL1-204ENST00000517554 MRPL18Q9H0U6 180 aaKnown RBP13.62□□□□□ -0.23
MTCL1-204ENST00000517554 GVQW2A0A096LPI5 108 aaPredicted RBP13.61□□□□□ -0.23
MTCL1-204ENST00000517554 COX19Q49B96 90 aa13.61□□□□□ -0.23
MTCL1-204ENST00000517554 NXT2Q9NPJ8 142 aaKnown RBP13.61□□□□□ -0.23
MTCL1-204ENST00000517554 PYGO1Q9Y3Y4 419 aa13.61□□□□□ -0.23
MTCL1-204ENST00000517554 IGLV4-3A0A075B6K6 122 aa13.6□□□□□ -0.23
MTCL1-204ENST00000517554 CFAP161Q6P656 301 aa13.6□□□□□ -0.23
MTCL1-204ENST00000517554 C2orf66Q6UXQ4 117 aa13.6□□□□□ -0.23
MTCL1-204ENST00000517554 MT-ND6P03923 174 aa13.59□□□□□ -0.23
MTCL1-204ENST00000517554 SDIM1Q6ZPB5 146 aa13.59□□□□□ -0.23
MTCL1-204ENST00000517554 ORMDL2Q53FV1 153 aa13.58□□□□□ -0.23
MTCL1-204ENST00000517554 SCXQ7RTU7 201 aa13.58□□□□□ -0.23
MTCL1-204ENST00000517554 PANO1I0J062 215 aa13.58□□□□□ -0.24
MTCL1-204ENST00000517554 K7EMI3 77 aa13.58□□□□□ -0.24
MTCL1-204ENST00000517554 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.24
MTCL1-204ENST00000517554 CYSLTR1Q9Y271 337 aa13.58□□□□□ -0.24
MTCL1-204ENST00000517554 TRAPPC1Q9Y5R8 145 aa13.58□□□□□ -0.24
MTCL1-204ENST00000517554 AP5S1Q9NUS5 200 aa13.57□□□□□ -0.24
MTCL1-204ENST00000517554 IGHV1-58A0A0C4DH39 117 aa13.56□□□□□ -0.24
MTCL1-204ENST00000517554 ZC2HC1BQ5TFG8 222 aa13.56□□□□□ -0.24
MTCL1-204ENST00000517554 CHAC1Q9BUX1 264 aa13.56□□□□□ -0.24
MTCL1-204ENST00000517554 IGIPA6NJ69 53 aa13.55□□□□□ -0.24
MTCL1-204ENST00000517554 C5orf38Q86SI9 138 aa13.55□□□□□ -0.24
MTCL1-204ENST00000517554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.55□□□□□ -0.24
MTCL1-204ENST00000517554 LINC01546A6NGU7 62 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 S100A2P29034 98 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 LINC00173Q6ZV60 143 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 CIRBP-AS1Q8TBR5 109 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 VPS13BQ7Z7G8 4022 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 IGHV3OR16-9A0A0B4J2B5 98 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 COX7A2LO14548 114 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 PRSS3P2Q8NHM4 247 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 TMEM141Q96I45 108 aa13.54□□□□□ -0.24
MTCL1-204ENST00000517554 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.53□□□□□ -0.24
MTCL1-204ENST00000517554 EPM2AB3EWF7 344 aa13.53□□□□□ -0.24
MTCL1-204ENST00000517554 Q5VSD8 79 aa13.53□□□□□ -0.24
MTCL1-204ENST00000517554 TOMM6Q96B49 74 aa13.52□□□□□ -0.25
MTCL1-204ENST00000517554 AMELXQ99217 191 aa13.52□□□□□ -0.25
MTCL1-204ENST00000517554 IGHV3-64A0A075B6Q5 118 aa13.51□□□□□ -0.25
MTCL1-204ENST00000517554 LINC00242Q5T6M2 205 aa13.51□□□□□ -0.25
MTCL1-204ENST00000517554 MALP21145 153 aa13.5□□□□□ -0.25
MTCL1-204ENST00000517554 COX6A2Q02221 97 aa13.5□□□□□ -0.25
MTCL1-204ENST00000517554 URB1-AS1Q96HZ7 61 aa13.5□□□□□ -0.25
MTCL1-204ENST00000517554 HIST1H2BLQ99880 126 aa13.5□□□□□ -0.25
MTCL1-204ENST00000517554 UBE2D1P51668 147 aa13.49□□□□□ -0.25
MTCL1-204ENST00000517554 S100A12P80511 92 aa13.49□□□□□ -0.25
MTCL1-204ENST00000517554 OR10D4PQ8NGN7 298 aa13.49□□□□□ -0.25
MTCL1-204ENST00000517554 CHTF8P0CG12 524 aa13.49□□□□□ -0.25
MTCL1-204ENST00000517554 CIRBPQ14011 172 aaKnown RBP13.49□□□□□ -0.25
MTCL1-204ENST00000517554 TEX43Q6ZNM6 134 aa13.49□□□□□ -0.25
MTCL1-204ENST00000517554 C18orf32Q8TCD1 76 aa13.49□□□□□ -0.25
MTCL1-204ENST00000517554 IGLV4-69A0A075B6H9 119 aa13.48□□□□□ -0.25
MTCL1-204ENST00000517554 NPSP0C0P6 89 aa13.48□□□□□ -0.25
MTCL1-204ENST00000517554 PDZD11Q5EBL8 140 aa13.48□□□□□ -0.25
MTCL1-204ENST00000517554 PYY3Q5JQD4 70 aa13.48□□□□□ -0.25
MTCL1-204ENST00000517554 ZNF561-AS1K7EIQ3 104 aa13.47□□□□□ -0.25
MTCL1-204ENST00000517554 FABP4P15090 132 aa13.47□□□□□ -0.25
MTCL1-204ENST00000517554 TIMM17AQ99595 171 aa13.47□□□□□ -0.25
MTCL1-204ENST00000517554 PACRGQ96M98 296 aaPredicted RBP13.46□□□□□ -0.25
MTCL1-204ENST00000517554 VCX2Q9H322 139 aa13.46□□□□□ -0.25
MTCL1-204ENST00000517554 SRRM2Q9UQ35 2752 aaKnown RBP13.46□□□□□ -0.26
MTCL1-204ENST00000517554 FA2HQ7L5A8 372 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 LINC00528Q8N1L1 170 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 A0A096LNJ9 63 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 G0S2P27469 103 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 SYCNQ0VAF6 134 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 Q6ZN92 141 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 ERASQ7Z444 233 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
MTCL1-204ENST00000517554 FAM229AH3BQW9 127 aa13.44□□□□□ -0.26
MTCL1-204ENST00000517554 Q6ZRU5 148 aa13.44□□□□□ -0.26
MTCL1-204ENST00000517554 FAM19A3Q7Z5A8 133 aa13.44□□□□□ -0.26
MTCL1-204ENST00000517554 SCGB3A1Q96QR1 104 aa13.44□□□□□ -0.26
MTCL1-204ENST00000517554 A0A087WZ39 114 aa13.43□□□□□ -0.26
MTCL1-204ENST00000517554 PCP4L1A6NKN8 68 aa13.43□□□□□ -0.26
MTCL1-204ENST00000517554 SPACA4Q8TDM5 124 aa13.43□□□□□ -0.26
MTCL1-204ENST00000517554 C2orf88Q9BSF0 95 aa13.43□□□□□ -0.26
MTCL1-204ENST00000517554 APOMO95445 188 aa13.42□□□□□ -0.26
MTCL1-204ENST00000517554 SPAG11BQ08648 103 aa13.42□□□□□ -0.26
MTCL1-204ENST00000517554 ORAOV1Q8WV07 137 aa13.42□□□□□ -0.26
MTCL1-204ENST00000517554 C2orf48Q96LS8 159 aa13.41□□□□□ -0.26
MTCL1-204ENST00000517554 A0A096LNI7 61 aa13.41□□□□□ -0.26
MTCL1-204ENST00000517554 LINC00614P0C842 121 aa13.41□□□□□ -0.26
MTCL1-204ENST00000517554 KRTAP10-4P60372 401 aaPredicted RBP13.41□□□□□ -0.26
MTCL1-204ENST00000517554 JOSD1Q15040 202 aaPredicted RBP13.41□□□□□ -0.26
MTCL1-204ENST00000517554 A0A087WYN8 130 aa13.4□□□□□ -0.26
MTCL1-204ENST00000517554 LINC00310P59036 64 aa13.4□□□□□ -0.26
MTCL1-204ENST00000517554 KIAA0087Q14695 138 aa13.4□□□□□ -0.26
MTCL1-204ENST00000517554 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
MTCL1-204ENST00000517554 IGKV2-24A0A0C4DH68 120 aa13.39□□□□□ -0.27
MTCL1-204ENST00000517554 PAPPA-AS1Q5QFB9 102 aa13.39□□□□□ -0.27
MTCL1-204ENST00000517554 NUPR1O60356 82 aa13.38□□□□□ -0.27
MTCL1-204ENST00000517554 PMCHL1Q16048 86 aa13.38□□□□□ -0.27
MTCL1-204ENST00000517554 A0A0J9YXV3 536 aa13.37□□□□□ -0.27
MTCL1-204ENST00000517554 LINC01549A6NIU2 74 aa13.37□□□□□ -0.27
MTCL1-204ENST00000517554 C10orf25Q5T742 122 aa13.37□□□□□ -0.27
MTCL1-204ENST00000517554 INAFM2P0DMQ5 153 aa13.36□□□□□ -0.27
MTCL1-204ENST00000517554 MAJINQ3KP22 176 aa13.36□□□□□ -0.27
MTCL1-204ENST00000517554 LINC01561Q8N1V8 128 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms