RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SPAG11BQ08648 103 aa8.57□□□□□ -1.04
TCOF1-215ENST00000515516 ANAPC16Q96DE5 110 aa8.57□□□□□ -1.04
TCOF1-215ENST00000515516 PLA2G2DQ9UNK4 145 aa8.57□□□□□ -1.04
TCOF1-215ENST00000515516 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
TCOF1-215ENST00000515516 OR10D4PQ8NGN7 298 aa8.56□□□□□ -1.04
TCOF1-215ENST00000515516 F8WDY8 70 aa8.55□□□□□ -1.04
TCOF1-215ENST00000515516 RPL18AQ02543 176 aaKnown RBP8.55□□□□□ -1.04
TCOF1-215ENST00000515516 Q6ZRP5 223 aa8.55□□□□□ -1.04
TCOF1-215ENST00000515516 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
TCOF1-215ENST00000515516 OPRPNQ99935 248 aaPredicted RBP8.55□□□□□ -1.04
TCOF1-215ENST00000515516 MAP1LC3AQ9H492 121 aa8.55□□□□□ -1.04
TCOF1-215ENST00000515516 LAMTOR2Q9Y2Q5 125 aa8.55□□□□□ -1.04
TCOF1-215ENST00000515516 TGIF2-C20orf24A0A0A6YYL0 155 aa8.54□□□□□ -1.04
TCOF1-215ENST00000515516 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
TCOF1-215ENST00000515516 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
TCOF1-215ENST00000515516 PYGO1Q9Y3Y4 419 aa8.53□□□□□ -1.04
TCOF1-215ENST00000515516 IGHV3OR16-9A0A0B4J2B5 98 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.52□□□□□ -1.05
TCOF1-215ENST00000515516 NDUFA1O15239 70 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 MT1HL1P0DM35 61 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 REG3GQ6UW15 175 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 TMEM141Q96I45 108 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 IMMP2LQ96T52 175 aa8.52□□□□□ -1.05
TCOF1-215ENST00000515516 MRPL35Q9NZE8 188 aaKnown RBP8.52□□□□□ -1.05
TCOF1-215ENST00000515516 A0A0J9YXV3 536 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 PRSS47A8MTI9 375 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 C9orf116Q5BN46 136 aaPredicted RBP8.51□□□□□ -1.05
TCOF1-215ENST00000515516 Q6ZN92 141 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 Q8N8P6 123 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 FAM104AQ969W3 186 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 C2orf88Q9BSF0 95 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 CYSLTR1Q9Y271 337 aa8.51□□□□□ -1.05
TCOF1-215ENST00000515516 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
TCOF1-215ENST00000515516 A0A1W2PNN7 141 aa8.5□□□□□ -1.05
TCOF1-215ENST00000515516 ORMDL2Q53FV1 153 aa8.5□□□□□ -1.05
TCOF1-215ENST00000515516 CTDSP1Q9GZU7 261 aa8.5□□□□□ -1.05
TCOF1-215ENST00000515516 LINC01600Q96MT4 127 aa8.49□□□□□ -1.05
TCOF1-215ENST00000515516 VCX2Q9H322 139 aa8.49□□□□□ -1.05
TCOF1-215ENST00000515516 A0A087WZ39 114 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 K7EMI3 77 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 MT-ND6P03923 174 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 G0S2P27469 103 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 CLLU1Q5K131 121 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 LINC00242Q5T6M2 205 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 C2orf66Q6UXQ4 117 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 UNQ6190/PRO20217Q6UXQ8 127 aa8.48□□□□□ -1.05
TCOF1-215ENST00000515516 NXT2Q9NPJ8 142 aaKnown RBP8.47□□□□□ -1.05
TCOF1-215ENST00000515516 NPSP0C0P6 89 aa8.46□□□□□ -1.06
TCOF1-215ENST00000515516 UBE2D1P51668 147 aa8.46□□□□□ -1.06
TCOF1-215ENST00000515516 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
TCOF1-215ENST00000515516 PAPPA-AS1Q5QFB9 102 aa8.46□□□□□ -1.06
TCOF1-215ENST00000515516 C10orf25Q5T742 122 aa8.46□□□□□ -1.06
TCOF1-215ENST00000515516 LINC01561Q8N1V8 128 aa8.46□□□□□ -1.06
TCOF1-215ENST00000515516 PACRGQ96M98 296 aaPredicted RBP8.46□□□□□ -1.06
TCOF1-215ENST00000515516 PRSS2P07478 247 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 TLX1NBP0CAT3 122 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 GAGE2EQ4V326 116 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 UQCC3Q6UW78 93 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
TCOF1-215ENST00000515516 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 GAGE2DQ9UEU5 116 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 PSORS1C2Q9UIG4 136 aa8.45□□□□□ -1.06
TCOF1-215ENST00000515516 TRBV30A0A0K0K1B3 111 aa8.44□□□□□ -1.06
TCOF1-215ENST00000515516 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
TCOF1-215ENST00000515516 HMCN2Q8NDA2 5059 aa8.44□□□□□ -1.06
TCOF1-215ENST00000515516 S100PP25815 95 aa8.43□□□□□ -1.06
TCOF1-215ENST00000515516 SEC11AP67812 179 aa8.43□□□□□ -1.06
TCOF1-215ENST00000515516 KIAA0087Q14695 138 aa8.43□□□□□ -1.06
TCOF1-215ENST00000515516 ZC2HC1BQ5TFG8 222 aa8.43□□□□□ -1.06
TCOF1-215ENST00000515516 AMELXQ99217 191 aa8.43□□□□□ -1.06
TCOF1-215ENST00000515516 TRAV9-1A0A075B6T8 112 aa8.42□□□□□ -1.06
TCOF1-215ENST00000515516 TMEM218A2RU14 115 aa8.42□□□□□ -1.06
TCOF1-215ENST00000515516 IGIPA6NJ69 53 aa8.42□□□□□ -1.06
TCOF1-215ENST00000515516 CKS1BP61024 79 aa8.42□□□□□ -1.06
TCOF1-215ENST00000515516 C6orf226Q5I0X4 101 aa8.42□□□□□ -1.06
TCOF1-215ENST00000515516 FAM19A5Q7Z5A7 132 aaPredicted RBP8.42□□□□□ -1.06
TCOF1-215ENST00000515516 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
TCOF1-215ENST00000515516 HERVK_113P63121 156 aa8.41□□□□□ -1.06
TCOF1-215ENST00000515516 KIAA1644Q3SXP7 199 aa8.41□□□□□ -1.06
TCOF1-215ENST00000515516 C2orf82Q6UX34 121 aa8.41□□□□□ -1.06
TCOF1-215ENST00000515516 GEMIN7Q9H840 131 aaKnown RBP8.41□□□□□ -1.06
TCOF1-215ENST00000515516 FAM168BA1KXE4 195 aa8.4□□□□□ -1.06
TCOF1-215ENST00000515516 NDUFC2-KCTD14E9PQ53 114 aa8.4□□□□□ -1.06
TCOF1-215ENST00000515516 KRTAP10-8P60410 259 aa8.4□□□□□ -1.06
TCOF1-215ENST00000515516 LINC00173Q6ZV60 143 aa8.4□□□□□ -1.06
TCOF1-215ENST00000515516 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
TCOF1-215ENST00000515516 ALKBH7Q9BT30 221 aaPredicted RBP8.4□□□□□ -1.06
TCOF1-215ENST00000515516 ADCYAP1P18509 176 aa8.39□□□□□ -1.07
TCOF1-215ENST00000515516 UBE2BP63146 152 aa8.39□□□□□ -1.07
TCOF1-215ENST00000515516 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
TCOF1-215ENST00000515516 TOMM6Q96B49 74 aa8.39□□□□□ -1.07
TCOF1-215ENST00000515516 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
TCOF1-215ENST00000515516 SEC11CQ9BY50 192 aa8.39□□□□□ -1.07
TCOF1-215ENST00000515516 LINC01549A6NIU2 74 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 M0QXV9 152 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 COX19Q49B96 90 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 ERASQ7Z444 233 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms