RNA–Protein interactions for RNA: ENST00000513996.5

HERC4-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-214ENST00000513996 A0A087WYN8 130 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.54□□□□□ -1.52
HERC4-214ENST00000513996 HNRNPA3P51991 378 aaKnown RBP5.54□□□□□ -1.52
HERC4-214ENST00000513996 COX6A2Q02221 97 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 SS18Q15532 418 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 CD164L2Q6UWJ8 174 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 Q6ZUT4 128 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 OPRPNQ99935 248 aaPredicted RBP5.54□□□□□ -1.52
HERC4-214ENST00000513996 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 KRTAP9-4Q9BYQ2 154 aa5.54□□□□□ -1.52
HERC4-214ENST00000513996 TRAV13-1A0A0B4J241 112 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 TCAPO15273 167 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 S100A8P05109 93 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 TMEM136Q6ZRR5 245 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 ATP5L2Q7Z4Y8 100 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 SPACA4Q8TDM5 124 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 TIMM21Q9BVV7 248 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 PKHD1L1Q86WI1 4243 aa5.53□□□□□ -1.52
HERC4-214ENST00000513996 LRP1Q07954 4544 aaKnown RBP5.53□□□□□ -1.52
HERC4-214ENST00000513996 IGHV1-58A0A0C4DH39 117 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 C1orf196B1AJZ1 125 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 PHOX2AO14813 284 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 PPBPP02775 128 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 RPL37AP61513 92 aaKnown RBP5.52□□□□□ -1.53
HERC4-214ENST00000513996 DPH3Q96FX2 82 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 PRELID3AQ96N28 172 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 YPEL4Q96NS1 127 aa5.52□□□□□ -1.53
HERC4-214ENST00000513996 KRTAP29-1A8MX34 341 aaPredicted RBP5.51□□□□□ -1.53
HERC4-214ENST00000513996 S100PP25815 95 aa5.51□□□□□ -1.53
HERC4-214ENST00000513996 C5orf38Q86SI9 138 aa5.51□□□□□ -1.53
HERC4-214ENST00000513996 ORMDL3Q8N138 153 aa5.51□□□□□ -1.53
HERC4-214ENST00000513996 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
HERC4-214ENST00000513996 FAT3Q8TDW7 4589 aa5.51□□□□□ -1.53
HERC4-214ENST00000513996 DMBT1Q9UGM3 2413 aaPredicted RBP5.5□□□□□ -1.53
HERC4-214ENST00000513996 IGLV4-69A0A075B6H9 119 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 A0A096LNI7 61 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 IGKV2-24A0A0C4DH68 120 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 LOC389332A0A1B0GUA5 103 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 COLCA2A8K830 154 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 SCO1O75880 301 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 SMAGPQ0VAQ4 97 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 MAJINQ3KP22 176 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 COX19Q49B96 90 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 CBLN2Q8IUK8 224 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 TMEM18Q96B42 140 aa5.5□□□□□ -1.53
HERC4-214ENST00000513996 COX7A2LO14548 114 aa5.49□□□□□ -1.53
HERC4-214ENST00000513996 MRPS36P82909 103 aaKnown RBP5.49□□□□□ -1.53
HERC4-214ENST00000513996 SYCNQ0VAF6 134 aa5.49□□□□□ -1.53
HERC4-214ENST00000513996 Q6ZRU5 148 aa5.49□□□□□ -1.53
HERC4-214ENST00000513996 CARD19Q96LW7 228 aa5.49□□□□□ -1.53
HERC4-214ENST00000513996 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
HERC4-214ENST00000513996 IGHV3OR16-9A0A0B4J2B5 98 aa5.48□□□□□ -1.53
HERC4-214ENST00000513996 RAB5AP20339 215 aa5.48□□□□□ -1.53
HERC4-214ENST00000513996 ZC2HC1BQ5TFG8 222 aa5.48□□□□□ -1.53
HERC4-214ENST00000513996 STPG4Q8N801 248 aa5.48□□□□□ -1.53
HERC4-214ENST00000513996 Q8N8P6 123 aa5.48□□□□□ -1.53
HERC4-214ENST00000513996 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
HERC4-214ENST00000513996 KIAA1644Q3SXP7 199 aa5.47□□□□□ -1.53
HERC4-214ENST00000513996 MAP1LC3AQ9H492 121 aa5.47□□□□□ -1.53
HERC4-214ENST00000513996 LAMTOR2Q9Y2Q5 125 aa5.47□□□□□ -1.53
HERC4-214ENST00000513996 PYGO1Q9Y3Y4 419 aa5.47□□□□□ -1.53
HERC4-214ENST00000513996 A0A0J9YXV3 536 aa5.46□□□□□ -1.54
HERC4-214ENST00000513996 IFITM10A6NMD0 228 aa5.46□□□□□ -1.54
HERC4-214ENST00000513996 OXTP01178 125 aa5.46□□□□□ -1.54
HERC4-214ENST00000513996 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
HERC4-214ENST00000513996 C10orf25Q5T742 122 aa5.46□□□□□ -1.54
HERC4-214ENST00000513996 C2orf48Q96LS8 159 aa5.46□□□□□ -1.54
HERC4-214ENST00000513996 TGIF2-C20orf24A0A0A6YYL0 155 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 KRTAP4-8A0A0G2JLE6 195 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 A0A1W2PNN7 141 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 IGIPA6NJ69 53 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.45□□□□□ -1.54
HERC4-214ENST00000513996 MT-ND6P03923 174 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 IFI27P40305 119 aaPredicted RBP5.45□□□□□ -1.54
HERC4-214ENST00000513996 PTTG1IPP53801 180 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 GAGE2BQ13066 116 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 LINC00242Q5T6M2 205 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 C2orf66Q6UXQ4 117 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 LINC00173Q6ZV60 143 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 CAMK2N2Q96S95 79 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 GNB1LQ9BYB4 327 aa5.45□□□□□ -1.54
HERC4-214ENST00000513996 LOC107984640A0A0U1RRK4 108 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 APOMO95445 188 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 UBE2D1P51668 147 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 KIAA0087Q14695 138 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 UNQ6190/PRO20217Q6UXQ8 127 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 ORAOV1Q8WV07 137 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 TMEM141Q96I45 108 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 AMELXQ99217 191 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 LINC00474Q9P2X8 69 aa5.44□□□□□ -1.54
HERC4-214ENST00000513996 A0A087WZ39 114 aa5.43□□□□□ -1.54
HERC4-214ENST00000513996 MT1HL1P0DM35 61 aa5.43□□□□□ -1.54
HERC4-214ENST00000513996 RNF151Q2KHN1 245 aa5.43□□□□□ -1.54
HERC4-214ENST00000513996 OR10D4PQ8NGN7 298 aa5.43□□□□□ -1.54
HERC4-214ENST00000513996 C7orf33Q8WU49 177 aa5.43□□□□□ -1.54
HERC4-214ENST00000513996 NXT2Q9NPJ8 142 aaKnown RBP5.43□□□□□ -1.54
HERC4-214ENST00000513996 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
HERC4-214ENST00000513996 PRR3P79522 188 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms