RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 CSNK1G2-AS1Q8NCQ2 148 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 TOMM6Q96B49 74 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 TIMM17AQ99595 171 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 MRPL16Q9NX20 251 aaKnown RBP3.13□□□□□ -1.91
CLDND1-228ENST00000513873 FRAS1Q86XX4 4008 aa3.13□□□□□ -1.91
CLDND1-228ENST00000513873 SACSQ9NZJ4 4579 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 IGLV2-18A0A075B6J9 118 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 H0Y8G0 127 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 UBE2L6O14933 153 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 DPM2O94777 84 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 LINC00315P59091 139 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 SEC11AP67812 179 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 SPATA45Q537H7 98 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 C2orf66Q6UXQ4 117 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 MRPL52Q86TS9 123 aaKnown RBP3.12□□□□□ -1.91
CLDND1-228ENST00000513873 OR11H2Q8NH07 326 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 RPL39LQ96EH5 51 aaKnown RBP3.12□□□□□ -1.91
CLDND1-228ENST00000513873 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 C2orf88Q9BSF0 95 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 VCX2Q9H322 139 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 SPANXA1Q9NS26 97 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 UQCR10Q9UDW1 63 aa3.12□□□□□ -1.91
CLDND1-228ENST00000513873 A0A087WX48 190 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 IGHV3-73A0A0B4J1V6 119 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 F8VRH5 84 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 IGKCP01834 107 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 GIG44P09565 113 aaPredicted RBP3.11□□□□□ -1.91
CLDND1-228ENST00000513873 DDTP30046 118 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 EMP1P54849 157 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 DAD1P61803 113 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 PMVKQ15126 192 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 AMMECR1LQ6DCA0 310 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 UFSP1Q6NVU6 142 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 Q6ZR54 194 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 LINC00612Q8N6U2 182 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 MIEN1Q9BRT3 115 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 WFDC10AQ9H1F0 79 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 GTSF1LQ9H1H1 148 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 PRO0255Q9UI72 69 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 HHLA3Q9XRX5 114 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 CHTOPQ9Y3Y2 248 aaKnown RBP3.11□□□□□ -1.91
CLDND1-228ENST00000513873 DNAH9Q9NYC9 4486 aa3.11□□□□□ -1.91
CLDND1-228ENST00000513873 TRBV25-1A0A075B6N4 114 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 RPL37AP8A6NKH3 93 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 ATP5G1P05496 136 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 DEFB130BP0DP73 79 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 DEFB130AP0DP74 79 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 ZNF25P17030 456 aaPredicted RBP3.1□□□□□ -1.91
CLDND1-228ENST00000513873 HNRNPA3P51991 378 aaKnown RBP3.1□□□□□ -1.91
CLDND1-228ENST00000513873 DEFB135Q30KP9 77 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 SLC25A34Q6PIV7 304 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 Q6ZTI0 123 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 BOD1L2Q8IYS8 172 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 ZNF664Q8N3J9 261 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 C20orf203Q8NBC4 194 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 ZNRF2Q8NHG8 242 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 MUC7Q8TAX7 377 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 B9D2Q9BPU9 175 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 TMEM243Q9BU79 118 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 TIMM21Q9BVV7 248 aa3.1□□□□□ -1.91
CLDND1-228ENST00000513873 CSDC2Q9Y534 153 aaKnown RBP3.1□□□□□ -1.91
CLDND1-228ENST00000513873 TRAV26-1A0A087WT03 109 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 A0A096LNJ9 63 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 IGIPA6NJ69 53 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 H3BRM9 83 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 K7EIL1 84 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 M0R143 59 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 SIVA1O15304 175 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 CCL25O15444 150 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 UBE2D3P61077 147 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 UBE2D2P62837 147 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 MRPS36P82909 103 aaKnown RBP3.09□□□□□ -1.91
CLDND1-228ENST00000513873 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
CLDND1-228ENST00000513873 DEFB121Q5J5C9 76 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 FAM222AQ5U5X8 452 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 SLC25A29Q8N8R3 303 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 OR5A1Q8NGJ0 315 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 BAALCQ8WXS3 180 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 CST9LQ9H4G1 147 aa3.09□□□□□ -1.91
CLDND1-228ENST00000513873 GEMIN7Q9H840 131 aaKnown RBP3.09□□□□□ -1.91
CLDND1-228ENST00000513873 MRPS16Q9Y3D3 137 aaKnown RBP3.09□□□□□ -1.91
CLDND1-228ENST00000513873 PLAC8L1A1L4L8 177 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 F5H768 121 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 H3BNG1 76 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 DLEU1O43261 78 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 COX8AP10176 69 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 REG3GQ6UW15 175 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 ATOH7Q8N100 152 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 Q8N976 141 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 ATP6V0E2Q8NHE4 81 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 PRO1933Q9H354 126 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 C11orf68Q9H3H3 251 aaKnown RBP3.08□□□□□ -1.92
CLDND1-228ENST00000513873 MRPL35Q9NZE8 188 aaKnown RBP3.08□□□□□ -1.92
CLDND1-228ENST00000513873 ICOSQ9Y6W8 199 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 AGRNO00468 2067 aa3.08□□□□□ -1.92
CLDND1-228ENST00000513873 TRBV6-8A0A0A6YYG3 113 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 TRAV8-6A0A0B4J262 113 aa3.07□□□□□ -1.92
CLDND1-228ENST00000513873 C11orf86A6NJI1 115 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms