RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 SMKR1H3BMG3 65 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 PHOX2AO14813 284 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 MT1HL1P0DM35 61 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 PCP4P48539 62 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 SS18Q15532 418 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 TMEM241Q24JQ0 296 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 CD164L2Q6UWJ8 174 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 STPG4Q8N801 248 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 C7orf33Q8WU49 177 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 LINC00526Q96FQ7 95 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 V9GYV3 84 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 RNF213Q63HN8 5207 aa4.31□□□□□ -1.72
RFC1-215ENST00000512881 C7orf77A4D0Y5 90 aa4.3□□□□□ -1.72
RFC1-215ENST00000512881 PPP1R17O96001 155 aa4.3□□□□□ -1.72
RFC1-215ENST00000512881 FCER1GP30273 86 aa4.3□□□□□ -1.72
RFC1-215ENST00000512881 FAM74A3Q4VXF1 159 aa4.3□□□□□ -1.72
RFC1-215ENST00000512881 ISOC2Q96AB3 205 aa4.3□□□□□ -1.72
RFC1-215ENST00000512881 A0A096LNI7 61 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 C1orf196B1AJZ1 125 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 C9JQL5 133 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 RPL23P62829 140 aaKnown RBP4.29□□□□□ -1.72
RFC1-215ENST00000512881 SYCNQ0VAF6 134 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 ADIRFQ15847 76 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 MRPL51Q4U2R6 128 aaKnown RBP4.29□□□□□ -1.72
RFC1-215ENST00000512881 FAM104BQ5XKR9 115 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 CARD19Q96LW7 228 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 LINC00474Q9P2X8 69 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 NAT8BQ9UHF3 227 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 LRP2P98164 4655 aa4.29□□□□□ -1.72
RFC1-215ENST00000512881 TRAV13-1A0A0B4J241 112 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 A0A1B0GVG6 124 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 SMIM27A0A1W2PRY6 76 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 COX7A2LO14548 114 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 PPP1R2P9O14990 202 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 CAMPP49913 170 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 PRR3P79522 188 aaKnown RBP4.28□□□□□ -1.72
RFC1-215ENST00000512881 SMAGPQ0VAQ4 97 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 PEA15Q15121 130 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 RNASE13Q5GAN3 156 aaKnown RBP4.28□□□□□ -1.72
RFC1-215ENST00000512881 KIR2DL4Q99706 377 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 C20orf78Q9BR46 151 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 NAT8Q9UHE5 227 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 PKIGQ9Y2B9 76 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 UBE2D4Q9Y2X8 147 aa4.28□□□□□ -1.72
RFC1-215ENST00000512881 CSDC2Q9Y534 153 aaKnown RBP4.28□□□□□ -1.72
RFC1-215ENST00000512881 IGLV4-69A0A075B6H9 119 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 TRBV24-1A0A075B6N3 115 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 A0A1B0GW15 77 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 LINC00862A6NCI5 91 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 CKS2P33552 79 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 C5orf38Q86SI9 138 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 TIMM21Q9BVV7 248 aa4.27□□□□□ -1.73
RFC1-215ENST00000512881 LOC107984640A0A0U1RRK4 108 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 PRSS47A8MTI9 375 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 TCAPO15273 167 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
RFC1-215ENST00000512881 GAGE2BQ13066 116 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 Q6ZUT4 128 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 TMEM18Q96B42 140 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 C2orf48Q96LS8 159 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 LINC01600Q96MT4 127 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 CAMK2N2Q96S95 79 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 SMDT1Q9H4I9 107 aa4.26□□□□□ -1.73
RFC1-215ENST00000512881 A0A1W2PNN7 141 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 D6R8Y8 96 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 F8W036 122 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 APOMO95445 188 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 S100A8P05109 93 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 RPL39P62891 51 aaKnown RBP4.25□□□□□ -1.73
RFC1-215ENST00000512881 SRSF9Q13242 221 aaKnown RBP eCLIP4.25□□□□□ -1.73
RFC1-215ENST00000512881 MRPL54Q6P161 138 aaKnown RBP4.25□□□□□ -1.73
RFC1-215ENST00000512881 SPINK6Q6UWN8 80 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 Q6ZRP5 223 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 FAM104AQ969W3 186 aa4.25□□□□□ -1.73
RFC1-215ENST00000512881 OPRPNQ99935 248 aaPredicted RBP4.25□□□□□ -1.73
RFC1-215ENST00000512881 A0A0J9YXV3 536 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 A0A1B0GXF2 115 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.24□□□□□ -1.73
RFC1-215ENST00000512881 NPYP01303 97 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 KRTAP10-8P60410 259 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 HBBP68871 147 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 SMIM2Q9BVW6 85 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 SPANXA1Q9NS26 97 aa4.24□□□□□ -1.73
RFC1-215ENST00000512881 IGHV3OR16-9A0A0B4J2B5 98 aa4.23□□□□□ -1.73
RFC1-215ENST00000512881 PPBPP02775 128 aa4.23□□□□□ -1.73
RFC1-215ENST00000512881 MRPS36P82909 103 aaKnown RBP4.23□□□□□ -1.73
RFC1-215ENST00000512881 SPAG11BQ08648 103 aa4.23□□□□□ -1.73
RFC1-215ENST00000512881 C9orf116Q5BN46 136 aaPredicted RBP4.23□□□□□ -1.73
RFC1-215ENST00000512881 REG3GQ6UW15 175 aa4.23□□□□□ -1.73
RFC1-215ENST00000512881 TMEM136Q6ZRR5 245 aa4.23□□□□□ -1.73
RFC1-215ENST00000512881 OR10D4PQ8NGN7 298 aa4.23□□□□□ -1.73
RFC1-215ENST00000512881 F8WDY8 70 aa4.22□□□□□ -1.73
RFC1-215ENST00000512881 RAB5AP20339 215 aa4.22□□□□□ -1.73
RFC1-215ENST00000512881 RPL18AQ02543 176 aaKnown RBP4.22□□□□□ -1.73
RFC1-215ENST00000512881 ATP5L2Q7Z4Y8 100 aa4.22□□□□□ -1.73
RFC1-215ENST00000512881 ORMDL3Q8N138 153 aa4.22□□□□□ -1.73
RFC1-215ENST00000512881 ORAOV1Q8WV07 137 aa4.22□□□□□ -1.73
RFC1-215ENST00000512881 PRELID3AQ96N28 172 aa4.22□□□□□ -1.73
RFC1-215ENST00000512881 MRPL35Q9NZE8 188 aaKnown RBP4.22□□□□□ -1.73
RFC1-215ENST00000512881 LOC389332A0A1B0GUA5 103 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms