RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 Q6ZRU5 148 aa7.53□□□□□ -1.2
CDK7-208ENST00000512687 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
CDK7-208ENST00000512687 C5orf38Q86SI9 138 aa7.53□□□□□ -1.2
CDK7-208ENST00000512687 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
CDK7-208ENST00000512687 MALP21145 153 aa7.52□□□□□ -1.21
CDK7-208ENST00000512687 LINC00310P59036 64 aa7.52□□□□□ -1.21
CDK7-208ENST00000512687 LOC100996750A0A140TA64 210 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 PPBPP02775 128 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 PRR3P79522 188 aaKnown RBP7.51□□□□□ -1.21
CDK7-208ENST00000512687 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 C7orf33Q8WU49 177 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 PRELID3AQ96N28 172 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 KRTAP4-6Q9BYQ5 205 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 SPANXA1Q9NS26 97 aa7.51□□□□□ -1.21
CDK7-208ENST00000512687 PTTG1IPP53801 180 aa7.5□□□□□ -1.21
CDK7-208ENST00000512687 MRPS36P82909 103 aaKnown RBP7.5□□□□□ -1.21
CDK7-208ENST00000512687 PNRC1Q12796 327 aaPredicted RBP7.5□□□□□ -1.21
CDK7-208ENST00000512687 TMEM136Q6ZRR5 245 aa7.5□□□□□ -1.21
CDK7-208ENST00000512687 IGHV3OR16-9A0A0B4J2B5 98 aa7.49□□□□□ -1.21
CDK7-208ENST00000512687 A0A0J9YXV3 536 aa7.49□□□□□ -1.21
CDK7-208ENST00000512687 LOC107984640A0A0U1RRK4 108 aa7.49□□□□□ -1.21
CDK7-208ENST00000512687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.49□□□□□ -1.21
CDK7-208ENST00000512687 SPAG11BQ08648 103 aa7.49□□□□□ -1.21
CDK7-208ENST00000512687 CAMK2N2Q96S95 79 aa7.49□□□□□ -1.21
CDK7-208ENST00000512687 LINC00474Q9P2X8 69 aa7.49□□□□□ -1.21
CDK7-208ENST00000512687 IGLV4-3A0A075B6K6 122 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 IFITM10A6NMD0 228 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 PRSS47A8MTI9 375 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 ADCYAP1P18509 176 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 GAGE2BQ13066 116 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 CLLU1Q5K131 121 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 SERTAD4-AS1Q5TG53 156 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 C2orf48Q96LS8 159 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 PKIGQ9Y2B9 76 aa7.48□□□□□ -1.21
CDK7-208ENST00000512687 A0A1W2PNN7 141 aa7.47□□□□□ -1.21
CDK7-208ENST00000512687 APOMO95445 188 aa7.47□□□□□ -1.21
CDK7-208ENST00000512687 MT-ND4LP03901 98 aa7.47□□□□□ -1.21
CDK7-208ENST00000512687 RAB14P61106 215 aa7.47□□□□□ -1.21
CDK7-208ENST00000512687 OR10D4PQ8NGN7 298 aa7.47□□□□□ -1.21
CDK7-208ENST00000512687 ORAOV1Q8WV07 137 aa7.47□□□□□ -1.21
CDK7-208ENST00000512687 IFITM2Q01629 132 aa7.46□□□□□ -1.22
CDK7-208ENST00000512687 C10orf25Q5T742 122 aa7.46□□□□□ -1.22
CDK7-208ENST00000512687 ZC2HC1BQ5TFG8 222 aa7.46□□□□□ -1.22
CDK7-208ENST00000512687 MAP1LC3AQ9H492 121 aa7.46□□□□□ -1.22
CDK7-208ENST00000512687 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.22
CDK7-208ENST00000512687 PYGO1Q9Y3Y4 419 aa7.46□□□□□ -1.22
CDK7-208ENST00000512687 C9orf118A6NHY6 69 aa7.45□□□□□ -1.22
CDK7-208ENST00000512687 RAB5AP20339 215 aa7.45□□□□□ -1.22
CDK7-208ENST00000512687 IFI27P40305 119 aaPredicted RBP7.45□□□□□ -1.22
CDK7-208ENST00000512687 RPL18AQ02543 176 aaKnown RBP7.45□□□□□ -1.22
CDK7-208ENST00000512687 LINC00173Q6ZV60 143 aa7.45□□□□□ -1.22
CDK7-208ENST00000512687 Q8N8P6 123 aa7.45□□□□□ -1.22
CDK7-208ENST00000512687 RNF151Q2KHN1 245 aa7.44□□□□□ -1.22
CDK7-208ENST00000512687 C9orf116Q5BN46 136 aaPredicted RBP7.44□□□□□ -1.22
CDK7-208ENST00000512687 LINC00242Q5T6M2 205 aa7.44□□□□□ -1.22
CDK7-208ENST00000512687 TMEM141Q96I45 108 aa7.44□□□□□ -1.22
CDK7-208ENST00000512687 UBE2D1P51668 147 aa7.43□□□□□ -1.22
CDK7-208ENST00000512687 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
CDK7-208ENST00000512687 C2orf66Q6UXQ4 117 aa7.43□□□□□ -1.22
CDK7-208ENST00000512687 UNQ6190/PRO20217Q6UXQ8 127 aa7.43□□□□□ -1.22
CDK7-208ENST00000512687 MRPL35Q9NZE8 188 aaKnown RBP7.43□□□□□ -1.22
CDK7-208ENST00000512687 C6orf48Q9UBA6 75 aa7.43□□□□□ -1.22
CDK7-208ENST00000512687 A0A087WZ39 114 aa7.42□□□□□ -1.22
CDK7-208ENST00000512687 TGIF2-C20orf24A0A0A6YYL0 155 aa7.42□□□□□ -1.22
CDK7-208ENST00000512687 NDUFA1O15239 70 aa7.42□□□□□ -1.22
CDK7-208ENST00000512687 SRSF9Q13242 221 aaKnown RBP eCLIP7.42□□□□□ -1.22
CDK7-208ENST00000512687 ODF1Q14990 250 aa7.42□□□□□ -1.22
CDK7-208ENST00000512687 PHF5AQ7RTV0 110 aaKnown RBP7.42□□□□□ -1.22
CDK7-208ENST00000512687 AMELXQ99217 191 aa7.42□□□□□ -1.22
CDK7-208ENST00000512687 CYSLTR1Q9Y271 337 aa7.42□□□□□ -1.22
CDK7-208ENST00000512687 FAM168BA1KXE4 195 aa7.41□□□□□ -1.22
CDK7-208ENST00000512687 TMEM218A2RU14 115 aa7.41□□□□□ -1.22
CDK7-208ENST00000512687 KIAA1644Q3SXP7 199 aa7.41□□□□□ -1.22
CDK7-208ENST00000512687 TEX43Q6ZNM6 134 aa7.41□□□□□ -1.22
CDK7-208ENST00000512687 Q6ZRP5 223 aa7.41□□□□□ -1.22
CDK7-208ENST00000512687 LINC01600Q96MT4 127 aa7.41□□□□□ -1.22
CDK7-208ENST00000512687 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 IGIPA6NJ69 53 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 F8WDY8 70 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 TLX1NBP0CAT3 122 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 ORMDL2Q53FV1 153 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 UQCC3Q6UW78 93 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 SPINK6Q6UWN8 80 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 C2orf82Q6UX34 121 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 IMMP2LQ96T52 175 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 CTDSP1Q9GZU7 261 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 PSORS1C2Q9UIG4 136 aa7.4□□□□□ -1.22
CDK7-208ENST00000512687 KRTAP11-1Q8IUC1 163 aa7.39□□□□□ -1.23
CDK7-208ENST00000512687 KRTAP7-1Q8IUC3 87 aa7.39□□□□□ -1.23
CDK7-208ENST00000512687 NXT2Q9NPJ8 142 aaKnown RBP7.39□□□□□ -1.23
CDK7-208ENST00000512687 FAM19A3Q7Z5A8 133 aa7.38□□□□□ -1.23
CDK7-208ENST00000512687 C2orf88Q9BSF0 95 aa7.38□□□□□ -1.23
CDK7-208ENST00000512687 TRAV9-1A0A075B6T8 112 aa7.37□□□□□ -1.23
CDK7-208ENST00000512687 K7EMI3 77 aa7.37□□□□□ -1.23
CDK7-208ENST00000512687 GAGE2EQ4V326 116 aa7.37□□□□□ -1.23
CDK7-208ENST00000512687 Q6ZN92 141 aa7.37□□□□□ -1.23
CDK7-208ENST00000512687 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
CDK7-208ENST00000512687 LINC01561Q8N1V8 128 aa7.37□□□□□ -1.23
CDK7-208ENST00000512687 TOMM6Q96B49 74 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms