RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 NDUFA4O00483 81 aa6.85□□□□□ -1.31
USP53-207ENST00000510852 S100A7L2Q5SY68 101 aa6.85□□□□□ -1.31
USP53-207ENST00000510852 C10orf113Q5VZT2 155 aa6.85□□□□□ -1.31
USP53-207ENST00000510852 A6NN06 94 aa6.84□□□□□ -1.31
USP53-207ENST00000510852 COX8AP10176 69 aa6.84□□□□□ -1.31
USP53-207ENST00000510852 TENM1Q9UKZ4 2725 aa6.84□□□□□ -1.32
USP53-207ENST00000510852 SLC25A29Q8N8R3 303 aa6.84□□□□□ -1.32
USP53-207ENST00000510852 TMEM190Q8WZ59 177 aa6.84□□□□□ -1.32
USP53-207ENST00000510852 SLURP1P55000 103 aa6.83□□□□□ -1.32
USP53-207ENST00000510852 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
USP53-207ENST00000510852 MIR17HGQ75NE6 70 aa6.83□□□□□ -1.32
USP53-207ENST00000510852 NDUFA11Q86Y39 141 aa6.83□□□□□ -1.32
USP53-207ENST00000510852 OSTCQ9NRP0 149 aa6.83□□□□□ -1.32
USP53-207ENST00000510852 LY96Q9Y6Y9 160 aa6.83□□□□□ -1.32
USP53-207ENST00000510852 CTXND1A0A1B0GTU2 59 aa6.82□□□□□ -1.32
USP53-207ENST00000510852 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
USP53-207ENST00000510852 PRAC1Q96KF2 57 aa6.82□□□□□ -1.32
USP53-207ENST00000510852 ZFP2Q6ZN57 461 aa6.82□□□□□ -1.32
USP53-207ENST00000510852 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
USP53-207ENST00000510852 TRAPPC1Q9Y5R8 145 aa6.82□□□□□ -1.32
USP53-207ENST00000510852 H3BRN7 92 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 PEX7O00628 323 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 LEPROTO15243 131 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 NPPCP23582 126 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 CLEC2BQ92478 149 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 ANK2Q01484 3957 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 IGHV3-49A0A0A0MS15 119 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 FAM167A-AS1Q96KT0 104 aa6.81□□□□□ -1.32
USP53-207ENST00000510852 IGHV3-74A0A0B4J1X5 117 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 IGHV3-66A0A0C4DH42 116 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 TRRAPQ9Y4A5 3859 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 IBA57-AS1B1ANH7 110 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 ARL14EPLP0DKL9 152 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 ICAM4Q14773 271 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 BAGE2Q86Y30 109 aa6.8□□□□□ -1.32
USP53-207ENST00000510852 IGHV7-4-1A0A0J9YVY3 117 aa6.79□□□□□ -1.32
USP53-207ENST00000510852 KRTAP16-1A8MUX0 517 aa6.79□□□□□ -1.32
USP53-207ENST00000510852 ATP11AUNQ6ZP68 121 aa6.79□□□□□ -1.32
USP53-207ENST00000510852 Q6ZRP5 223 aa6.79□□□□□ -1.32
USP53-207ENST00000510852 CMYA5Q8N3K9 4069 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 COL6A5A8TX70 2615 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 C2orf70A6NJV1 201 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 GCHFRP30047 84 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 FHL2Q14192 279 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 LINC01600Q96MT4 127 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 RHPN1-AS1Q9BWJ2 59 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 A0A1W2PS18 150 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 NANOS2P60321 138 aaKnown RBP6.78□□□□□ -1.32
USP53-207ENST00000510852 FAM104BQ5XKR9 115 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 TMEM14CQ9P0S9 112 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 WNK1Q9H4A3 2382 aa6.78□□□□□ -1.32
USP53-207ENST00000510852 F2Z2F3 143 aa6.77□□□□□ -1.33
USP53-207ENST00000510852 FAM104AQ969W3 186 aa6.77□□□□□ -1.33
USP53-207ENST00000510852 RHOHQ15669 191 aa6.77□□□□□ -1.33
USP53-207ENST00000510852 TMEM167BQ9NRX6 74 aa6.77□□□□□ -1.33
USP53-207ENST00000510852 SMAD5-AS1Q9Y6J3 95 aa6.77□□□□□ -1.33
USP53-207ENST00000510852 ARL2-SNX15V9GYD0 113 aa6.77□□□□□ -1.33
USP53-207ENST00000510852 CKS2P33552 79 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 GNG13Q9P2W3 67 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 STAB1Q9NY15 2570 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 RPL37AP8A6NKH3 93 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 PRSS1P07477 247 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 LYPD5Q6UWN5 251 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 SLC50A1Q9BRV3 221 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 VWFP04275 2813 aa6.76□□□□□ -1.33
USP53-207ENST00000510852 ZNF56Q15929 161 aa6.75□□□□□ -1.33
USP53-207ENST00000510852 Q6ZSN1 163 aa6.75□□□□□ -1.33
USP53-207ENST00000510852 APCSP02743 223 aa6.75□□□□□ -1.33
USP53-207ENST00000510852 MPLKIPQ8TAP9 179 aa6.75□□□□□ -1.33
USP53-207ENST00000510852 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
USP53-207ENST00000510852 CSNK1G2-AS1Q8NCQ2 148 aa6.74□□□□□ -1.33
USP53-207ENST00000510852 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
USP53-207ENST00000510852 EGFEM1PQ0D2K5 195 aa6.74□□□□□ -1.33
USP53-207ENST00000510852 DYNLRB2Q8TF09 96 aa6.74□□□□□ -1.33
USP53-207ENST00000510852 PRSS2P07478 247 aa6.73□□□□□ -1.33
USP53-207ENST00000510852 PDE6HQ13956 83 aa6.73□□□□□ -1.33
USP53-207ENST00000510852 DEFB114Q30KQ6 69 aa6.73□□□□□ -1.33
USP53-207ENST00000510852 IGKV3D-20A0A0C4DH25 116 aa6.72□□□□□ -1.33
USP53-207ENST00000510852 C3orf84H3BNL1 204 aa6.72□□□□□ -1.33
USP53-207ENST00000510852 IGFL4Q6B9Z1 124 aa6.72□□□□□ -1.33
USP53-207ENST00000510852 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
USP53-207ENST00000510852 C11orf94C9JXX5 98 aa6.71□□□□□ -1.33
USP53-207ENST00000510852 IGLV5-37A0A075B6J1 123 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 H7BZZ5 65 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 SOCS3O14543 225 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 LYPD1Q8N2G4 141 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 WFDC9Q8NEX5 89 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 PRSS3P2Q8NHM4 247 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 C8orf49Q96NF6 230 aa6.71□□□□□ -1.34
USP53-207ENST00000510852 IGLV1-51P01701 117 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 LINC00643Q86TS7 51 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 B9D2Q9BPU9 175 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 KRTAP23-1A1A580 65 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 Q1T7F1 81 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 TXNDC17Q9BRA2 123 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 DNHD1Q96M86 4753 aa6.7□□□□□ -1.34
USP53-207ENST00000510852 M0R3E3 92 aa6.69□□□□□ -1.34
USP53-207ENST00000510852 PRB4P10163 310 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms