RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 C10orf128Q5T292 105 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 TMEM136Q6ZRR5 245 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 FAM19A2Q8N3H0 131 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 SERP2Q8N6R1 65 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 ZNF563Q8TA94 476 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 DYNLRB2Q8TF09 96 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 TRGV9Q99603 122 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 LHFPL6Q9Y693 200 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 FREM1Q5H8C1 2179 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 DOCK10Q96BY6 2186 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 FCGBPQ9Y6R7 5405 aaPredicted RBP2.13□□□□□ -2.07
NUP54-209ENST00000510569 FAM186AA6NE01 2351 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 FBN3Q75N90 2809 aa2.13□□□□□ -2.07
NUP54-209ENST00000510569 FREM2Q5SZK8 3169 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 MED12LQ86YW9 2145 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 GCN1Q92616 2671 aaKnown RBP2.12□□□□□ -2.07
NUP54-209ENST00000510569 KANTRA0A1W2PQU2 76 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 CRYM-AS1A6NIL9 109 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 SYS1-DBNDD2H3BUS1 97 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 NDUFC1O43677 76 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 CRPP02741 224 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 IGLV7-43P04211 117 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 ZNF22P17026 224 aaPredicted RBP2.12□□□□□ -2.07
NUP54-209ENST00000510569 ZNF816Q0VGE8 651 aaPredicted RBP2.12□□□□□ -2.07
NUP54-209ENST00000510569 NNATQ16517 81 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 DEFB110Q30KQ9 67 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 ETDBQ3ZM63 59 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 Q6ZQT0 140 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 LINC00269Q8N2A0 174 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 LINC00304Q8N9R0 145 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 FAM213BQ8TBF2 198 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 MUCL1Q96DR8 90 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 TMEM141Q96I45 108 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 RNF5Q99942 180 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 CHD8Q9HCK8 2581 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 CEP250Q9BV73 2442 aa2.12□□□□□ -2.07
NUP54-209ENST00000510569 MAP1BP46821 2468 aaKnown RBP2.12□□□□□ -2.07
NUP54-209ENST00000510569 EPG5Q9HCE0 2579 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 AHCTF1Q8WYP5 2266 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 CEP295Q9C0D2 2601 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 NCOR2Q9Y618 2525 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 A0A087WSZ3 146 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 A0A087WWC5 75 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 TRAV17A0A0B4J275 112 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 B4DSR2 109 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 RBM3P98179 157 aaKnown RBP2.11□□□□□ -2.07
NUP54-209ENST00000510569 SPANXN5Q5MJ07 72 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 C1orf134Q5TEV5 83 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 RPL7L1Q6DKI1 246 aaKnown RBP2.11□□□□□ -2.07
NUP54-209ENST00000510569 CASC2Q6XLA1 102 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 PROK2Q9HC23 129 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 NDUFA12Q9UI09 145 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 U3KQA8 63 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 TENM4Q6N022 2769 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 IGSF10Q6WRI0 2623 aa2.11□□□□□ -2.07
NUP54-209ENST00000510569 SPENQ96T58 3664 aaKnown RBP2.11□□□□□ -2.07
NUP54-209ENST00000510569 DNAJC13O75165 2243 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 DSPP15924 2871 aaKnown RBP2.1□□□□□ -2.07
NUP54-209ENST00000510569 IGLV10-54A0A075B6I4 117 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 TRAV3A0A0B4J244 114 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 C11orf86A6NJI1 115 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 SFTA3P0C7M3 94 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 DSCR4P56555 118 aaPredicted RBP2.1□□□□□ -2.07
NUP54-209ENST00000510569 ESPL1Q14674 2120 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 PMCHL1Q16048 86 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 SPATA45Q537H7 98 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 NMSQ5H8A3 153 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 Q6ZS52 159 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 ZNF826PQ6ZT77 177 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 ARHGAP5-AS1Q96IT6 56 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 LINC01600Q96MT4 127 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 PRRC2CQ9Y520 2896 aaKnown RBP2.1□□□□□ -2.07
NUP54-209ENST00000510569 CFAP47Q6ZTR5 3102 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 RIF1Q5UIP0 2472 aaKnown RBP2.1□□□□□ -2.07
NUP54-209ENST00000510569 ASPMQ8IZT6 3477 aa2.1□□□□□ -2.07
NUP54-209ENST00000510569 BAHCC1Q9P281 2608 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 BSNQ9UPA5 3926 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 IGHV1-18A0A0C4DH31 117 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 LOC107984156A0A0G2JMH3 177 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 TRBV10-3A0A0K0K1G6 114 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 A0A1B0GU33 70 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 C7orf77A4D0Y5 90 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 E7EUB6 86 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 IL4P05112 153 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 BAALC-AS2P0C853 105 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 MGST1P10620 155 aaKnown RBP2.09□□□□□ -2.07
NUP54-209ENST00000510569 DEFA4P12838 97 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 MPV17LQ2QL34 196 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 S100A7L2Q5SY68 101 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 ARL17AQ8IVW1 177 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 Q8NAQ8 132 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 ST20-AS1Q8NBB2 130 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 C18orf32Q8TCD1 76 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 OR8B2Q96RD0 313 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 CYP4F30PQ9H0H9 118 aa2.09□□□□□ -2.07
NUP54-209ENST00000510569 SETXQ7Z333 2677 aaKnown RBP2.09□□□□□ -2.08
NUP54-209ENST00000510569 ACACBO00763 2458 aa2.09□□□□□ -2.08
NUP54-209ENST00000510569 SDK1Q7Z5N4 2213 aa2.09□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms