RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
TPM3-219ENST00000509409 SRSF3P84103 164 aaKnown RBP9.54□□□□□ -0.88
TPM3-219ENST00000509409 D6R8Y8 96 aa9.53□□□□□ -0.88
TPM3-219ENST00000509409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
TPM3-219ENST00000509409 HBBP68871 147 aa9.53□□□□□ -0.88
TPM3-219ENST00000509409 SRSF9Q13242 221 aaKnown RBP eCLIP9.53□□□□□ -0.88
TPM3-219ENST00000509409 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
TPM3-219ENST00000509409 MT-ND6P03923 174 aa9.52□□□□□ -0.89
TPM3-219ENST00000509409 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
TPM3-219ENST00000509409 ODF1Q14990 250 aa9.52□□□□□ -0.89
TPM3-219ENST00000509409 OR10D4PQ8NGN7 298 aa9.52□□□□□ -0.89
TPM3-219ENST00000509409 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.89
TPM3-219ENST00000509409 SMIM2Q9BVW6 85 aa9.52□□□□□ -0.89
TPM3-219ENST00000509409 SPANXA1Q9NS26 97 aa9.52□□□□□ -0.89
TPM3-219ENST00000509409 A0A1B0GVG6 124 aa9.51□□□□□ -0.89
TPM3-219ENST00000509409 KRTAP10-8P60410 259 aa9.51□□□□□ -0.89
TPM3-219ENST00000509409 SMDT1Q9H4I9 107 aa9.51□□□□□ -0.89
TPM3-219ENST00000509409 IFITM10A6NMD0 228 aa9.5□□□□□ -0.89
TPM3-219ENST00000509409 NPYP01303 97 aa9.5□□□□□ -0.89
TPM3-219ENST00000509409 RAB5AP20339 215 aa9.5□□□□□ -0.89
TPM3-219ENST00000509409 RNF151Q2KHN1 245 aa9.5□□□□□ -0.89
TPM3-219ENST00000509409 LOC100996750A0A140TA64 210 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 NDUFA1O15239 70 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 PPBPP02775 128 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 MRPS36P82909 103 aaKnown RBP9.49□□□□□ -0.89
TPM3-219ENST00000509409 TMEM136Q6ZRR5 245 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 PHF5AQ7RTV0 110 aaKnown RBP9.49□□□□□ -0.89
TPM3-219ENST00000509409 IMMP2LQ96T52 175 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 KRTAP4-6Q9BYQ5 205 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 PSORS1C2Q9UIG4 136 aa9.49□□□□□ -0.89
TPM3-219ENST00000509409 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
TPM3-219ENST00000509409 A0A1B0GXF2 115 aa9.48□□□□□ -0.89
TPM3-219ENST00000509409 F8WDY8 70 aa9.48□□□□□ -0.89
TPM3-219ENST00000509409 C1orf137Q5JT78 98 aa9.48□□□□□ -0.89
TPM3-219ENST00000509409 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
TPM3-219ENST00000509409 MRPL35Q9NZE8 188 aaKnown RBP9.48□□□□□ -0.89
TPM3-219ENST00000509409 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
TPM3-219ENST00000509409 ORMDL3Q8N138 153 aa9.47□□□□□ -0.89
TPM3-219ENST00000509409 PRELID3AQ96N28 172 aa9.47□□□□□ -0.89
TPM3-219ENST00000509409 TGIF2-C20orf24A0A0A6YYL0 155 aa9.46□□□□□ -0.9
TPM3-219ENST00000509409 C10orf25Q5T742 122 aa9.46□□□□□ -0.9
TPM3-219ENST00000509409 UNQ6190/PRO20217Q6UXQ8 127 aa9.46□□□□□ -0.9
TPM3-219ENST00000509409 LRP2P98164 4655 aa9.45□□□□□ -0.9
TPM3-219ENST00000509409 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
TPM3-219ENST00000509409 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
TPM3-219ENST00000509409 ATP5L2Q7Z4Y8 100 aa9.45□□□□□ -0.9
TPM3-219ENST00000509409 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
TPM3-219ENST00000509409 A0A087WZ39 114 aa9.44□□□□□ -0.9
TPM3-219ENST00000509409 C6orf48Q9UBA6 75 aa9.43□□□□□ -0.9
TPM3-219ENST00000509409 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
TPM3-219ENST00000509409 IGLV4-3A0A075B6K6 122 aa9.42□□□□□ -0.9
TPM3-219ENST00000509409 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
TPM3-219ENST00000509409 FAM19A5Q7Z5A7 132 aaPredicted RBP9.42□□□□□ -0.9
TPM3-219ENST00000509409 TMEM141Q96I45 108 aa9.42□□□□□ -0.9
TPM3-219ENST00000509409 MAP1LC3AQ9H492 121 aa9.42□□□□□ -0.9
TPM3-219ENST00000509409 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
TPM3-219ENST00000509409 LINC00242Q5T6M2 205 aa9.41□□□□□ -0.9
TPM3-219ENST00000509409 TEX43Q6ZNM6 134 aa9.41□□□□□ -0.9
TPM3-219ENST00000509409 IGLV7-43P04211 117 aa9.4□□□□□ -0.9
TPM3-219ENST00000509409 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
TPM3-219ENST00000509409 DIRC1Q969H9 104 aa9.4□□□□□ -0.9
TPM3-219ENST00000509409 PACRGQ96M98 296 aaPredicted RBP9.4□□□□□ -0.9
TPM3-219ENST00000509409 C2orf88Q9BSF0 95 aa9.4□□□□□ -0.9
TPM3-219ENST00000509409 LAMTOR2Q9Y2Q5 125 aa9.4□□□□□ -0.9
TPM3-219ENST00000509409 PRSS47A8MTI9 375 aa9.39□□□□□ -0.91
TPM3-219ENST00000509409 MT-ND4LP03901 98 aa9.39□□□□□ -0.91
TPM3-219ENST00000509409 UBE2BP63146 152 aa9.39□□□□□ -0.91
TPM3-219ENST00000509409 Q6ZN92 141 aa9.39□□□□□ -0.91
TPM3-219ENST00000509409 VCX2Q9H322 139 aa9.39□□□□□ -0.91
TPM3-219ENST00000509409 CYSLTR1Q9Y271 337 aa9.39□□□□□ -0.91
TPM3-219ENST00000509409 TRBV30A0A0K0K1B3 111 aa9.38□□□□□ -0.91
TPM3-219ENST00000509409 ZC2HC1BQ5TFG8 222 aa9.38□□□□□ -0.91
TPM3-219ENST00000509409 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
TPM3-219ENST00000509409 Q8N8P6 123 aa9.38□□□□□ -0.91
TPM3-219ENST00000509409 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
TPM3-219ENST00000509409 PRSS2P07478 247 aa9.37□□□□□ -0.91
TPM3-219ENST00000509409 UBE2D1P51668 147 aa9.37□□□□□ -0.91
TPM3-219ENST00000509409 PNRC1Q12796 327 aaPredicted RBP9.37□□□□□ -0.91
TPM3-219ENST00000509409 C2orf66Q6UXQ4 117 aa9.37□□□□□ -0.91
TPM3-219ENST00000509409 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
TPM3-219ENST00000509409 M0QXV9 152 aa9.36□□□□□ -0.91
TPM3-219ENST00000509409 RAB14P61106 215 aa9.36□□□□□ -0.91
TPM3-219ENST00000509409 ORMDL2Q53FV1 153 aa9.36□□□□□ -0.91
TPM3-219ENST00000509409 KRTAP11-1Q8IUC1 163 aa9.36□□□□□ -0.91
TPM3-219ENST00000509409 LINC01561Q8N1V8 128 aa9.36□□□□□ -0.91
TPM3-219ENST00000509409 NDUFC2-KCTD14E9PQ53 114 aa9.35□□□□□ -0.91
TPM3-219ENST00000509409 CKS1BP61024 79 aa9.35□□□□□ -0.91
TPM3-219ENST00000509409 C6orf226Q5I0X4 101 aa9.35□□□□□ -0.91
TPM3-219ENST00000509409 PRR26Q8N8Z3 221 aa9.35□□□□□ -0.91
TPM3-219ENST00000509409 RNF213Q63HN8 5207 aa9.35□□□□□ -0.91
TPM3-219ENST00000509409 H0Y9J4 135 aa9.34□□□□□ -0.91
TPM3-219ENST00000509409 CTDSP1Q9GZU7 261 aa9.34□□□□□ -0.91
TPM3-219ENST00000509409 AMELXQ99217 191 aa9.33□□□□□ -0.92
TPM3-219ENST00000509409 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
TPM3-219ENST00000509409 LINC00173Q6ZV60 143 aa9.32□□□□□ -0.92
TPM3-219ENST00000509409 KRTAP7-1Q8IUC3 87 aa9.32□□□□□ -0.92
TPM3-219ENST00000509409 LINC00469Q8N7U9 141 aa9.32□□□□□ -0.92
TPM3-219ENST00000509409 ALKBH7Q9BT30 221 aaPredicted RBP9.32□□□□□ -0.92
TPM3-219ENST00000509409 NXT2Q9NPJ8 142 aaKnown RBP9.32□□□□□ -0.92
TPM3-219ENST00000509409 IGIPA6NJ69 53 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms