RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 FAM168BA1KXE4 195 aa9.62□□□□□ -0.87
CXCL1-202ENST00000509101 UBE2D1P51668 147 aa9.62□□□□□ -0.87
CXCL1-202ENST00000509101 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
CXCL1-202ENST00000509101 FAM104BQ5XKR9 115 aa9.62□□□□□ -0.87
CXCL1-202ENST00000509101 A0A1B0GXF2 115 aa9.61□□□□□ -0.87
CXCL1-202ENST00000509101 Q6ZUT4 128 aa9.61□□□□□ -0.87
CXCL1-202ENST00000509101 FAM19A5Q7Z5A7 132 aaPredicted RBP9.61□□□□□ -0.87
CXCL1-202ENST00000509101 NRACQ8N912 160 aa9.61□□□□□ -0.87
CXCL1-202ENST00000509101 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
CXCL1-202ENST00000509101 FCER1GP30273 86 aa9.6□□□□□ -0.87
CXCL1-202ENST00000509101 PNRC1Q12796 327 aaPredicted RBP9.6□□□□□ -0.87
CXCL1-202ENST00000509101 RNF151Q2KHN1 245 aa9.6□□□□□ -0.87
CXCL1-202ENST00000509101 TMEM218A2RU14 115 aa9.59□□□□□ -0.87
CXCL1-202ENST00000509101 PPP1R2P9O14990 202 aa9.59□□□□□ -0.87
CXCL1-202ENST00000509101 UQCC3Q6UW78 93 aa9.59□□□□□ -0.87
CXCL1-202ENST00000509101 OR10D4PQ8NGN7 298 aa9.59□□□□□ -0.87
CXCL1-202ENST00000509101 CSDC2Q9Y534 153 aaKnown RBP9.59□□□□□ -0.87
CXCL1-202ENST00000509101 A0A1B0GW15 77 aa9.58□□□□□ -0.88
CXCL1-202ENST00000509101 HBBP68871 147 aa9.58□□□□□ -0.88
CXCL1-202ENST00000509101 SMAGPQ0VAQ4 97 aa9.58□□□□□ -0.88
CXCL1-202ENST00000509101 COMMD7Q86VX2 200 aa9.58□□□□□ -0.88
CXCL1-202ENST00000509101 ORAOV1Q8WV07 137 aa9.58□□□□□ -0.88
CXCL1-202ENST00000509101 ANAPC16Q96DE5 110 aa9.58□□□□□ -0.88
CXCL1-202ENST00000509101 MRPL35Q9NZE8 188 aaKnown RBP9.58□□□□□ -0.88
CXCL1-202ENST00000509101 F8W036 122 aa9.57□□□□□ -0.88
CXCL1-202ENST00000509101 MT-ND4LP03901 98 aa9.57□□□□□ -0.88
CXCL1-202ENST00000509101 RPL13AP40429 203 aaKnown RBP9.57□□□□□ -0.88
CXCL1-202ENST00000509101 IMMP2LQ96T52 175 aa9.57□□□□□ -0.88
CXCL1-202ENST00000509101 NDUFA1O15239 70 aa9.56□□□□□ -0.88
CXCL1-202ENST00000509101 SUMO2P61956 95 aaKnown RBP9.56□□□□□ -0.88
CXCL1-202ENST00000509101 UBE2BP63146 152 aa9.56□□□□□ -0.88
CXCL1-202ENST00000509101 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
CXCL1-202ENST00000509101 D6R8Y8 96 aa9.55□□□□□ -0.88
CXCL1-202ENST00000509101 M0QXV9 152 aa9.55□□□□□ -0.88
CXCL1-202ENST00000509101 VCYO14598 125 aa9.55□□□□□ -0.88
CXCL1-202ENST00000509101 CKS2P33552 79 aa9.55□□□□□ -0.88
CXCL1-202ENST00000509101 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
CXCL1-202ENST00000509101 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
CXCL1-202ENST00000509101 LINC00862A6NCI5 91 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 S100A8P05109 93 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 LCE2AQ5TA79 106 aaPredicted RBP9.54□□□□□ -0.88
CXCL1-202ENST00000509101 UNQ6190/PRO20217Q6UXQ8 127 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 ATP5L2Q7Z4Y8 100 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 KIR2DL4Q99706 377 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
CXCL1-202ENST00000509101 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
CXCL1-202ENST00000509101 KRTAP9-6A0A140TA67 174 aa9.53□□□□□ -0.88
CXCL1-202ENST00000509101 PPP1R17O96001 155 aa9.53□□□□□ -0.88
CXCL1-202ENST00000509101 NPYP01303 97 aa9.53□□□□□ -0.88
CXCL1-202ENST00000509101 SEC11CQ9BY50 192 aa9.53□□□□□ -0.88
CXCL1-202ENST00000509101 F8WDY8 70 aa9.52□□□□□ -0.89
CXCL1-202ENST00000509101 TSPAN13O95857 204 aa9.52□□□□□ -0.89
CXCL1-202ENST00000509101 TMEM18Q96B42 140 aa9.52□□□□□ -0.89
CXCL1-202ENST00000509101 TIMM21Q9BVV7 248 aa9.52□□□□□ -0.89
CXCL1-202ENST00000509101 C20orf78Q9BR46 151 aa9.51□□□□□ -0.89
CXCL1-202ENST00000509101 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
CXCL1-202ENST00000509101 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
CXCL1-202ENST00000509101 C10orf91Q5T1B1 145 aa9.5□□□□□ -0.89
CXCL1-202ENST00000509101 TMEM136Q6ZRR5 245 aa9.5□□□□□ -0.89
CXCL1-202ENST00000509101 SMIM2Q9BVW6 85 aa9.5□□□□□ -0.89
CXCL1-202ENST00000509101 CARHSP1Q9Y2V2 147 aaKnown RBP9.5□□□□□ -0.89
CXCL1-202ENST00000509101 RPL32P62910 135 aaKnown RBP9.49□□□□□ -0.89
CXCL1-202ENST00000509101 ORMDL3Q8N138 153 aa9.49□□□□□ -0.89
CXCL1-202ENST00000509101 PRELID3AQ96N28 172 aa9.49□□□□□ -0.89
CXCL1-202ENST00000509101 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
CXCL1-202ENST00000509101 PPBPP02775 128 aa9.48□□□□□ -0.89
CXCL1-202ENST00000509101 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
CXCL1-202ENST00000509101 IFITM10A6NMD0 228 aa9.47□□□□□ -0.89
CXCL1-202ENST00000509101 TCAPO15273 167 aa9.47□□□□□ -0.89
CXCL1-202ENST00000509101 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.9
CXCL1-202ENST00000509101 TGIF2-C20orf24A0A0A6YYL0 155 aa9.45□□□□□ -0.9
CXCL1-202ENST00000509101 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
CXCL1-202ENST00000509101 ZNF861PO60384 105 aa9.45□□□□□ -0.9
CXCL1-202ENST00000509101 KIAA0087Q14695 138 aa9.45□□□□□ -0.9
CXCL1-202ENST00000509101 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
CXCL1-202ENST00000509101 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
CXCL1-202ENST00000509101 PRSS47A8MTI9 375 aa9.44□□□□□ -0.9
CXCL1-202ENST00000509101 NDUFC2-KCTD14E9PQ53 114 aa9.44□□□□□ -0.9
CXCL1-202ENST00000509101 C2orf82Q6UX34 121 aa9.44□□□□□ -0.9
CXCL1-202ENST00000509101 MUC17Q685J3 4493 aa9.44□□□□□ -0.9
CXCL1-202ENST00000509101 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
CXCL1-202ENST00000509101 KIAA1644Q3SXP7 199 aa9.43□□□□□ -0.9
CXCL1-202ENST00000509101 RPS10P5Q9NQ39 176 aa9.43□□□□□ -0.9
CXCL1-202ENST00000509101 TRAV9-1A0A075B6T8 112 aa9.42□□□□□ -0.9
CXCL1-202ENST00000509101 A0A087X002 238 aa9.42□□□□□ -0.9
CXCL1-202ENST00000509101 PACRGQ96M98 296 aaPredicted RBP9.42□□□□□ -0.9
CXCL1-202ENST00000509101 LAMTOR2Q9Y2Q5 125 aa9.42□□□□□ -0.9
CXCL1-202ENST00000509101 RHEBQ15382 184 aa9.41□□□□□ -0.9
CXCL1-202ENST00000509101 MAP1LC3AQ9H492 121 aa9.41□□□□□ -0.9
CXCL1-202ENST00000509101 NUPR1O60356 82 aa9.4□□□□□ -0.9
CXCL1-202ENST00000509101 APOC3P02656 99 aa9.4□□□□□ -0.9
CXCL1-202ENST00000509101 S100PP25815 95 aa9.4□□□□□ -0.9
CXCL1-202ENST00000509101 Q8N8P6 123 aa9.4□□□□□ -0.9
CXCL1-202ENST00000509101 TYMSOSQ8TAI1 123 aa9.4□□□□□ -0.9
CXCL1-202ENST00000509101 RAB5AP20339 215 aa9.39□□□□□ -0.91
CXCL1-202ENST00000509101 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
CXCL1-202ENST00000509101 LINC00469Q8N7U9 141 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms