RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 IBA57-AS1B1ANH7 110 aa7.14□□□□□ -1.27
PDGFRA-207ENST00000509092 BPESC1Q9GZL8 116 aa7.14□□□□□ -1.27
PDGFRA-207ENST00000509092 COL6A6A6NMZ7 2263 aa7.14□□□□□ -1.27
PDGFRA-207ENST00000509092 TRAV10A0A0B4J240 114 aa7.13□□□□□ -1.27
PDGFRA-207ENST00000509092 PRR15Q8IV56 129 aa7.13□□□□□ -1.27
PDGFRA-207ENST00000509092 RHPN1-AS1Q9BWJ2 59 aa7.13□□□□□ -1.27
PDGFRA-207ENST00000509092 C19orf54Q5BKX5 351 aa7.13□□□□□ -1.27
PDGFRA-207ENST00000509092 C1orf158Q8N1D5 194 aa7.13□□□□□ -1.27
PDGFRA-207ENST00000509092 CSMD1Q96PZ7 3565 aa7.13□□□□□ -1.27
PDGFRA-207ENST00000509092 SNRPD3P62318 126 aaKnown RBP7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 FAM229BQ4G0N7 80 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 Q8NA96 180 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 SIRPDQ9H106 197 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 IGSF10Q6WRI0 2623 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 TACC2O95359 2948 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 ZFYVE26Q68DK2 2539 aa7.12□□□□□ -1.27
PDGFRA-207ENST00000509092 MIFP14174 115 aa7.11□□□□□ -1.27
PDGFRA-207ENST00000509092 Q9UF83 564 aa7.11□□□□□ -1.27
PDGFRA-207ENST00000509092 PCNX1Q96RV3 2341 aa7.11□□□□□ -1.27
PDGFRA-207ENST00000509092 TRBV7-4A0A0J9YYF1 115 aa7.11□□□□□ -1.27
PDGFRA-207ENST00000509092 TMEM256-PLSCR3K7ERE1 68 aa7.11□□□□□ -1.27
PDGFRA-207ENST00000509092 LAMTOR3Q9UHA4 124 aa7.11□□□□□ -1.27
PDGFRA-207ENST00000509092 CCL18P55774 89 aa7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 Q6ZRU5 148 aa7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 LY6G6DO95868 133 aa7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 IGKV3-20P01619 116 aa7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 LINC01547P58512 204 aaPredicted RBP7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 Q6ZSN1 163 aa7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 MOB4Q9Y3A3 225 aa7.1□□□□□ -1.27
PDGFRA-207ENST00000509092 SPINK13Q1W4C9 94 aa7.09□□□□□ -1.27
PDGFRA-207ENST00000509092 C5orf56Q8N8D9 126 aa7.09□□□□□ -1.27
PDGFRA-207ENST00000509092 CFAP46Q8IYW2 2715 aa7.08□□□□□ -1.28
PDGFRA-207ENST00000509092 ESRGQ1W209 222 aa7.08□□□□□ -1.28
PDGFRA-207ENST00000509092 LINC00158P58513 81 aa7.08□□□□□ -1.28
PDGFRA-207ENST00000509092 CXCL6P80162 114 aa7.08□□□□□ -1.28
PDGFRA-207ENST00000509092 Q6ZTI0 123 aa7.08□□□□□ -1.28
PDGFRA-207ENST00000509092 ERC2-IT1O76042 136 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 SAA4P35542 130 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 Q8N814 137 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 COX7B2Q8TF08 81 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 TM2D3Q9BRN9 247 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 RELNP78509 3460 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 IGHV3-53P01767 116 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 Q6ZQT0 140 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 Q96MF0 132 aa7.07□□□□□ -1.28
PDGFRA-207ENST00000509092 TRBV6-4A0A1B0GX49 114 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 CD164Q04900 197 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 USMG5Q96IX5 58 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 A0A1W2PRX2 142 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 PAX4O43316 350 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 HAMPP81172 84 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 Q6ZVQ6 151 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 TMEM254Q8TBM7 123 aa7.06□□□□□ -1.28
PDGFRA-207ENST00000509092 LOC110117498A0A087WWA1 95 aa7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 IGHV3-11P01762 117 aa7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 Q8N3U1 123 aa7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 DOPEY2Q9Y3R5 2298 aa7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 K7EMT4 169 aa7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 NREPQ16612 68 aa7.05□□□□□ -1.28
PDGFRA-207ENST00000509092 HIVEP3Q5T1R4 2406 aa7.04□□□□□ -1.28
PDGFRA-207ENST00000509092 LCE2DQ5TA82 110 aaPredicted RBP7.04□□□□□ -1.28
PDGFRA-207ENST00000509092 DYNLRB2Q8TF09 96 aa7.04□□□□□ -1.28
PDGFRA-207ENST00000509092 H3BUA1 57 aa7.03□□□□□ -1.28
PDGFRA-207ENST00000509092 K7EQG2 157 aa7.03□□□□□ -1.28
PDGFRA-207ENST00000509092 CDC42SE2Q9NRR3 84 aa7.03□□□□□ -1.28
PDGFRA-207ENST00000509092 K7EQD1 137 aa7.03□□□□□ -1.28
PDGFRA-207ENST00000509092 LY6HO94772 140 aa7.03□□□□□ -1.28
PDGFRA-207ENST00000509092 C11orf68Q9H3H3 251 aaKnown RBP7.03□□□□□ -1.28
PDGFRA-207ENST00000509092 FUSP35637 526 aaKnown RBP eCLIP7.02□□□□□ -1.28
PDGFRA-207ENST00000509092 SPTBN1Q01082 2364 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-207ENST00000509092 PRYO14603 147 aa7.02□□□□□ -1.29
PDGFRA-207ENST00000509092 HTN1P15515 57 aa7.02□□□□□ -1.29
PDGFRA-207ENST00000509092 RETNQ9HD89 108 aa7.02□□□□□ -1.29
PDGFRA-207ENST00000509092 TOMM7Q9P0U1 55 aa7.02□□□□□ -1.29
PDGFRA-207ENST00000509092 A0A096LNT2 108 aa7.01□□□□□ -1.29
PDGFRA-207ENST00000509092 Q6ZTC4 211 aa7.01□□□□□ -1.29
PDGFRA-207ENST00000509092 CHD6Q8TD26 2715 aa7.01□□□□□ -1.29
PDGFRA-207ENST00000509092 ADGRG4Q8IZF6 3080 aa7.01□□□□□ -1.29
PDGFRA-207ENST00000509092 ZFP36P26651 326 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-207ENST00000509092 KMT2BQ9UMN6 2715 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-207ENST00000509092 TRBV10-1A0A0K0K1A3 114 aa7□□□□□ -1.29
PDGFRA-207ENST00000509092 ZNF561-AS1K7EIQ3 104 aa7□□□□□ -1.29
PDGFRA-207ENST00000509092 C6orf223Q8N319 242 aa7□□□□□ -1.29
PDGFRA-207ENST00000509092 ZFHX3Q15911 3703 aa7□□□□□ -1.29
PDGFRA-207ENST00000509092 RNASE1P07998 156 aaKnown RBP7□□□□□ -1.29
PDGFRA-207ENST00000509092 FAM208BQ5VWN6 2430 aa7□□□□□ -1.29
PDGFRA-207ENST00000509092 A0A087WZ39 114 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 M0R2N4 97 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 NANOS2P60321 138 aaKnown RBP6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 DAD1P61803 113 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 Q1T7F1 81 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 NTM-AS1Q6ZSK4 140 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 ZNF462Q96JM2 2506 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 BPY2O14599 106 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 PDE6GP18545 87 aa6.99□□□□□ -1.29
PDGFRA-207ENST00000509092 BBC3Q96PG8 261 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms