RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 EIF5AL1Q6IS14 154 aaKnown RBP1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 MIR17HGQ75NE6 70 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 SNX29P2Q8IUI4 249 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 DAND5Q8N907 189 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 TERB2Q8NHR7 220 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 MITD1Q8WV92 249 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 SFRP2Q96HF1 295 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 DERL1Q9BUN8 251 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 C9orf16Q9BUW7 83 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 LINC00846Q9NV44 126 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 TMEM14CQ9P0S9 112 aa1.38□□□□□ -2.19
TOPBP1-206ENST00000508524 NBEAP1P0C6P0 100 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 AKR1C4P17516 323 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 DEFA3P59666 94 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 S100A10P60903 97 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 RANP62826 216 aaKnown RBP1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 UBE2BP63146 152 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 SCGB2B2Q4G0G5 96 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 FAM229BQ4G0N7 80 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 RNASE10Q5GAN6 216 aaKnown RBP1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 TMEM14EPQ6UXP3 125 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 GOLT1AQ6ZVE7 132 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 C8orf59Q8N0T1 100 aaPredicted RBP1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 HYLS1Q96M11 299 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 SCGB3A2Q96PL1 93 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 AQP10Q96PS8 301 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 MIXL1Q9H2W2 232 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 TREM1Q9NP99 234 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 MCUBQ9NWR8 336 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 LENEPQ9Y5L5 61 aa1.37□□□□□ -2.19
TOPBP1-206ENST00000508524 TRBV25-1A0A075B6N4 114 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 IGHV1-24A0A0C4DH33 117 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 IGHV1-58A0A0C4DH39 117 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 GRIFINA4D1Z8 144 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 C9orf92A6NGG3 77 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 K7EN84 100 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 M0R381 172 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 CCL25O15444 150 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 HSBP1O75506 76 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 GCGP01275 180 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 ARMS2P0C7Q2 107 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 FGF7P21781 194 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 RANBP1P43487 201 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 GNGT1P63211 74 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 UBE2NLQ5JXB2 153 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 Q6Q795 121 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 Q86TA4 180 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 OR5A1Q8NGJ0 315 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 ZFAND1Q8TCF1 268 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 CIB3Q96Q77 187 aaPredicted RBP1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 HIGD2AQ9BW72 106 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 IL36BQ9NZH7 164 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 FLVCR2Q9UPI3 526 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 UBE2D4Q9Y2X8 147 aa1.36□□□□□ -2.19
TOPBP1-206ENST00000508524 IGKV2D-26A0A0A0MRZ7 120 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 MUC21A0A140T8X8 626 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 FAM25EA8MYX2 175 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 FNDC10F2Z333 226 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 M0R036 132 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 SSSCA1O60232 199 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 BCE1O60756 84 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 S100A9P06702 114 aaKnown RBP1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 CRIP1P50238 77 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 PKIAP61925 76 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 CTAG1AP78358 180 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 ZNF56Q15929 161 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 KRTAP5-10Q6L8G5 202 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 S100A7AQ86SG5 101 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 S100A16Q96FQ6 103 aaKnown RBP1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 MAP1LC3CQ9BXW4 147 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 PSENENQ9NZ42 101 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 C6orf48Q9UBA6 75 aa1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 C14orf166Q9Y224 244 aaKnown RBP1.35□□□□□ -2.19
TOPBP1-206ENST00000508524 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 TMSB15BA0A087X1C1 80 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 LOC100506127A0A0U1RQW1 187 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 LINC00959A0A1B0GUT2 108 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 A0A1B0GVG6 124 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 IGKV2-29A2NJV5 120 aaPredicted RBP1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 C19orf71A6NCJ1 209 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 SLC25A6P12236 298 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 RPL28P46779 137 aaKnown RBP1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 RAB4BP61018 213 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 UNQ6190/PRO20217Q6UXQ8 127 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 OR5C1Q8NGR4 320 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 OR10AG1Q8NH19 301 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 SMIM8Q96KF7 97 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 SMDT1Q9H4I9 107 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 OR5AC2Q9NZP5 309 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 CACFD1Q9UGQ2 172 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 PKIGQ9Y2B9 76 aa1.34□□□□□ -2.19
TOPBP1-206ENST00000508524 UBE2L5PA0A1B0GUS4 154 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 CENPXA8MT69 81 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 M0QY20 66 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 HPGDSO60760 199 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 CST7O76096 145 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 ESDP10768 282 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 SPRR2DP22532 72 aa1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 S100A4P26447 101 aaKnown RBP1.33□□□□□ -2.2
TOPBP1-206ENST00000508524 RPL12P30050 165 aaKnown RBP1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms