RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 AMTP48728 403 aa10.39□□□□□ -0.75
LMNA-222ENST00000508500 COTL1Q14019 142 aa10.39□□□□□ -0.75
LMNA-222ENST00000508500 ORMDL2Q53FV1 153 aa10.39□□□□□ -0.75
LMNA-222ENST00000508500 IFITM10A6NMD0 228 aa10.38□□□□□ -0.75
LMNA-222ENST00000508500 FABP4P15090 132 aa10.38□□□□□ -0.75
LMNA-222ENST00000508500 HNRNPA3P51991 378 aaKnown RBP10.38□□□□□ -0.75
LMNA-222ENST00000508500 CNBPP62633 177 aaKnown RBP10.38□□□□□ -0.75
LMNA-222ENST00000508500 SDHAF1A6NFY7 115 aa10.37□□□□□ -0.75
LMNA-222ENST00000508500 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
LMNA-222ENST00000508500 KIR2DL4Q99706 377 aa10.37□□□□□ -0.75
LMNA-222ENST00000508500 hDV102S1A0JD36 115 aa10.36□□□□□ -0.75
LMNA-222ENST00000508500 UBE2L6O14933 153 aa10.36□□□□□ -0.75
LMNA-222ENST00000508500 HBDP02042 147 aa10.36□□□□□ -0.75
LMNA-222ENST00000508500 FCER1GP30273 86 aa10.36□□□□□ -0.75
LMNA-222ENST00000508500 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
LMNA-222ENST00000508500 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.35□□□□□ -0.75
LMNA-222ENST00000508500 IGKV2-29A2NJV5 120 aaPredicted RBP10.35□□□□□ -0.75
LMNA-222ENST00000508500 I3L3M4 83 aa10.35□□□□□ -0.75
LMNA-222ENST00000508500 CIRBPQ14011 172 aaKnown RBP10.35□□□□□ -0.75
LMNA-222ENST00000508500 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
LMNA-222ENST00000508500 HMCN2Q8NDA2 5059 aa10.35□□□□□ -0.75
LMNA-222ENST00000508500 IGKV3OR2-268A0A0C4DH90 116 aa10.34□□□□□ -0.75
LMNA-222ENST00000508500 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
LMNA-222ENST00000508500 LEPROTL1O95214 131 aa10.34□□□□□ -0.75
LMNA-222ENST00000508500 RPL37AP61513 92 aaKnown RBP10.34□□□□□ -0.75
LMNA-222ENST00000508500 FAM19A2Q8N3H0 131 aa10.34□□□□□ -0.75
LMNA-222ENST00000508500 OR10D4PQ8NGN7 298 aa10.34□□□□□ -0.75
LMNA-222ENST00000508500 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
LMNA-222ENST00000508500 AKR1D1P51857 326 aa10.33□□□□□ -0.76
LMNA-222ENST00000508500 FGF6P10767 208 aa10.32□□□□□ -0.76
LMNA-222ENST00000508500 A0A096LNJ9 63 aa10.31□□□□□ -0.76
LMNA-222ENST00000508500 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
LMNA-222ENST00000508500 CHCHD10Q8WYQ3 142 aaPredicted RBP10.31□□□□□ -0.76
LMNA-222ENST00000508500 H7C423 109 aa10.3□□□□□ -0.76
LMNA-222ENST00000508500 ATP5LO75964 103 aa10.3□□□□□ -0.76
LMNA-222ENST00000508500 OXTP01178 125 aa10.3□□□□□ -0.76
LMNA-222ENST00000508500 TSHBP01222 138 aa10.3□□□□□ -0.76
LMNA-222ENST00000508500 SMIM6P0DI80 62 aa10.3□□□□□ -0.76
LMNA-222ENST00000508500 JOSD1Q15040 202 aaPredicted RBP10.3□□□□□ -0.76
LMNA-222ENST00000508500 AMMECR1LQ6DCA0 310 aa10.3□□□□□ -0.76
LMNA-222ENST00000508500 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
LMNA-222ENST00000508500 A0A087WYN8 130 aa10.29□□□□□ -0.76
LMNA-222ENST00000508500 HIGD2BQ4VC39 106 aa10.29□□□□□ -0.76
LMNA-222ENST00000508500 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
LMNA-222ENST00000508500 MAP1LC3CQ9BXW4 147 aa10.29□□□□□ -0.76
LMNA-222ENST00000508500 NPSP0C0P6 89 aa10.28□□□□□ -0.76
LMNA-222ENST00000508500 SMAGPQ0VAQ4 97 aa10.28□□□□□ -0.76
LMNA-222ENST00000508500 FOXI1Q12951 378 aa10.28□□□□□ -0.76
LMNA-222ENST00000508500 SPACA4Q8TDM5 124 aa10.28□□□□□ -0.76
LMNA-222ENST00000508500 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
LMNA-222ENST00000508500 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.27□□□□□ -0.77
LMNA-222ENST00000508500 PMCHL1Q16048 86 aa10.27□□□□□ -0.77
LMNA-222ENST00000508500 PET117Q6UWS5 81 aa10.27□□□□□ -0.77
LMNA-222ENST00000508500 OR5A1Q8NGJ0 315 aa10.27□□□□□ -0.77
LMNA-222ENST00000508500 C3orf79P0CE67 100 aa10.26□□□□□ -0.77
LMNA-222ENST00000508500 ZNF25P17030 456 aaPredicted RBP10.26□□□□□ -0.77
LMNA-222ENST00000508500 C2orf66Q6UXQ4 117 aa10.26□□□□□ -0.77
LMNA-222ENST00000508500 ERASQ7Z444 233 aa10.26□□□□□ -0.77
LMNA-222ENST00000508500 IFI27L1Q96BM0 104 aa10.26□□□□□ -0.77
LMNA-222ENST00000508500 GVQW2A0A096LPI5 108 aaPredicted RBP10.25□□□□□ -0.77
LMNA-222ENST00000508500 LINC00959A0A1B0GUT2 108 aa10.25□□□□□ -0.77
LMNA-222ENST00000508500 C20orf202A1L168 122 aa10.25□□□□□ -0.77
LMNA-222ENST00000508500 COX6A2Q02221 97 aa10.25□□□□□ -0.77
LMNA-222ENST00000508500 CFAP161Q6P656 301 aa10.25□□□□□ -0.77
LMNA-222ENST00000508500 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
LMNA-222ENST00000508500 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
LMNA-222ENST00000508500 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.24□□□□□ -0.77
LMNA-222ENST00000508500 SYS1-DBNDD2H3BUS1 97 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 KRTDAPP60985 99 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 PYY3Q5JQD4 70 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 PAPPA-AS1Q5QFB9 102 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 PLAC8Q9NZF1 115 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 PYGO1Q9Y3Y4 419 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 UBR4Q5T4S7 5183 aa10.24□□□□□ -0.77
LMNA-222ENST00000508500 CCL25O15444 150 aa10.23□□□□□ -0.77
LMNA-222ENST00000508500 XCL1P47992 114 aa10.23□□□□□ -0.77
LMNA-222ENST00000508500 MRPL52Q86TS9 123 aaKnown RBP10.23□□□□□ -0.77
LMNA-222ENST00000508500 TIMM21Q9BVV7 248 aa10.23□□□□□ -0.77
LMNA-222ENST00000508500 TNXBP22105 4242 aa10.22□□□□□ -0.77
LMNA-222ENST00000508500 LINC00518Q8N0U6 118 aa10.22□□□□□ -0.77
LMNA-222ENST00000508500 LINC00526Q96FQ7 95 aa10.22□□□□□ -0.77
LMNA-222ENST00000508500 DPH3Q96FX2 82 aa10.22□□□□□ -0.77
LMNA-222ENST00000508500 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 IGIPA6NJ69 53 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 SCGB1D1O95968 90 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 MT1HL1P0DM35 61 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 Q6ZN92 141 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 TMEM101Q96IK0 257 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
LMNA-222ENST00000508500 A0A096LNI7 61 aa10.2□□□□□ -0.78
LMNA-222ENST00000508500 LINC01545Q5VT33 79 aa10.2□□□□□ -0.78
LMNA-222ENST00000508500 LINC00173Q6ZV60 143 aa10.2□□□□□ -0.78
LMNA-222ENST00000508500 ZNF664Q8N3J9 261 aa10.2□□□□□ -0.78
LMNA-222ENST00000508500 CSDC2Q9Y534 153 aaKnown RBP10.2□□□□□ -0.78
LMNA-222ENST00000508500 IGKV2-24A0A0C4DH68 120 aa10.19□□□□□ -0.78
LMNA-222ENST00000508500 IGHV1-58A0A0C4DH39 117 aa10.18□□□□□ -0.78
LMNA-222ENST00000508500 S100A12P80511 92 aa10.18□□□□□ -0.78
LMNA-222ENST00000508500 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms