RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SCO1O75880 301 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 MT1HL1P0DM35 61 aa8.95□□□□□ -0.98
RAB28-205ENST00000508274 OPRPNQ99935 248 aaPredicted RBP8.95□□□□□ -0.98
RAB28-205ENST00000508274 C10orf91Q5T1B1 145 aa8.94□□□□□ -0.98
RAB28-205ENST00000508274 SERTAD4-AS1Q5TG53 156 aa8.94□□□□□ -0.98
RAB28-205ENST00000508274 PRR3P79522 188 aaKnown RBP8.93□□□□□ -0.98
RAB28-205ENST00000508274 LINC00474Q9P2X8 69 aa8.93□□□□□ -0.98
RAB28-205ENST00000508274 ATP5L2Q7Z4Y8 100 aa8.92□□□□□ -0.98
RAB28-205ENST00000508274 CAMK2N2Q96S95 79 aa8.92□□□□□ -0.98
RAB28-205ENST00000508274 CARHSP1Q9Y2V2 147 aaKnown RBP8.92□□□□□ -0.98
RAB28-205ENST00000508274 APOC3P02656 99 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 PPBPP02775 128 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 ADCYAP1P18509 176 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 PTTG1IPP53801 180 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 ORMDL3Q8N138 153 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 PRELID3AQ96N28 172 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 SPANXA1Q9NS26 97 aa8.91□□□□□ -0.98
RAB28-205ENST00000508274 LOC107984640A0A0U1RRK4 108 aa8.9□□□□□ -0.98
RAB28-205ENST00000508274 SPAG11BQ08648 103 aa8.9□□□□□ -0.98
RAB28-205ENST00000508274 GAGE2BQ13066 116 aa8.9□□□□□ -0.98
RAB28-205ENST00000508274 TMEM136Q6ZRR5 245 aa8.9□□□□□ -0.98
RAB28-205ENST00000508274 SEC11CQ9BY50 192 aa8.9□□□□□ -0.98
RAB28-205ENST00000508274 PKIGQ9Y2B9 76 aa8.9□□□□□ -0.98
RAB28-205ENST00000508274 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
RAB28-205ENST00000508274 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.89□□□□□ -0.99
RAB28-205ENST00000508274 APOMO95445 188 aa8.89□□□□□ -0.99
RAB28-205ENST00000508274 MRPS36P82909 103 aaKnown RBP8.89□□□□□ -0.99
RAB28-205ENST00000508274 C2orf48Q96LS8 159 aa8.89□□□□□ -0.99
RAB28-205ENST00000508274 TNXBP22105 4242 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 IGHV3OR16-9A0A0B4J2B5 98 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 LOC389332A0A1B0GUA5 103 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 IFITM10A6NMD0 228 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 PNRC1Q12796 327 aaPredicted RBP8.88□□□□□ -0.99
RAB28-205ENST00000508274 SVBPQ8N300 66 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 ORAOV1Q8WV07 137 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 PLA2G2DQ9UNK4 145 aa8.88□□□□□ -0.99
RAB28-205ENST00000508274 A0A1W2PNN7 141 aa8.87□□□□□ -0.99
RAB28-205ENST00000508274 RAB5AP20339 215 aa8.87□□□□□ -0.99
RAB28-205ENST00000508274 TMA7Q9Y2S6 64 aaKnown RBP8.87□□□□□ -0.99
RAB28-205ENST00000508274 MT-ND4LP03901 98 aa8.86□□□□□ -0.99
RAB28-205ENST00000508274 IFI27P40305 119 aaPredicted RBP8.86□□□□□ -0.99
RAB28-205ENST00000508274 RPL18AQ02543 176 aaKnown RBP8.86□□□□□ -0.99
RAB28-205ENST00000508274 OR10D4PQ8NGN7 298 aa8.86□□□□□ -0.99
RAB28-205ENST00000508274 ANAPC16Q96DE5 110 aa8.86□□□□□ -0.99
RAB28-205ENST00000508274 IGLV4-3A0A075B6K6 122 aa8.86□□□□□ -0.99
RAB28-205ENST00000508274 PRSS47A8MTI9 375 aa8.85□□□□□ -0.99
RAB28-205ENST00000508274 SNAPINO95295 136 aa8.85□□□□□ -0.99
RAB28-205ENST00000508274 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
RAB28-205ENST00000508274 C10orf25Q5T742 122 aa8.85□□□□□ -0.99
RAB28-205ENST00000508274 MAP1LC3AQ9H492 121 aa8.85□□□□□ -0.99
RAB28-205ENST00000508274 LAMTOR2Q9Y2Q5 125 aa8.84□□□□□ -0.99
RAB28-205ENST00000508274 PYGO1Q9Y3Y4 419 aa8.84□□□□□ -0.99
RAB28-205ENST00000508274 ODF1Q14990 250 aa8.83□□□□□ -1
RAB28-205ENST00000508274 LINC00242Q5T6M2 205 aa8.83□□□□□ -1
RAB28-205ENST00000508274 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
RAB28-205ENST00000508274 Q6ZRP5 223 aa8.83□□□□□ -1
RAB28-205ENST00000508274 TMEM141Q96I45 108 aa8.83□□□□□ -1
RAB28-205ENST00000508274 MRPL35Q9NZE8 188 aaKnown RBP8.83□□□□□ -1
RAB28-205ENST00000508274 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
RAB28-205ENST00000508274 NDUFA1O15239 70 aa8.82□□□□□ -1
RAB28-205ENST00000508274 RNF151Q2KHN1 245 aa8.82□□□□□ -1
RAB28-205ENST00000508274 UNQ6190/PRO20217Q6UXQ8 127 aa8.82□□□□□ -1
RAB28-205ENST00000508274 Q8N8P6 123 aa8.82□□□□□ -1
RAB28-205ENST00000508274 LINC01600Q96MT4 127 aa8.82□□□□□ -1
RAB28-205ENST00000508274 SPINK6Q6UWN8 80 aa8.82□□□□□ -1
RAB28-205ENST00000508274 C2orf66Q6UXQ4 117 aa8.82□□□□□ -1
RAB28-205ENST00000508274 PHF5AQ7RTV0 110 aaKnown RBP8.82□□□□□ -1
RAB28-205ENST00000508274 C6orf48Q9UBA6 75 aa8.82□□□□□ -1
RAB28-205ENST00000508274 UBR4Q5T4S7 5183 aa8.82□□□□□ -1
RAB28-205ENST00000508274 A0A087WZ39 114 aa8.81□□□□□ -1
RAB28-205ENST00000508274 UBE2D1P51668 147 aa8.81□□□□□ -1
RAB28-205ENST00000508274 SRSF9Q13242 221 aaKnown RBP eCLIP8.81□□□□□ -1
RAB28-205ENST00000508274 KIAA0087Q14695 138 aa8.81□□□□□ -1
RAB28-205ENST00000508274 TEX43Q6ZNM6 134 aa8.81□□□□□ -1
RAB28-205ENST00000508274 LINC00173Q6ZV60 143 aa8.81□□□□□ -1
RAB28-205ENST00000508274 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
RAB28-205ENST00000508274 FAM168BA1KXE4 195 aa8.8□□□□□ -1
RAB28-205ENST00000508274 CTDSP1Q9GZU7 261 aa8.8□□□□□ -1
RAB28-205ENST00000508274 PSORS1C2Q9UIG4 136 aa8.8□□□□□ -1
RAB28-205ENST00000508274 LOC105371267A0A1B0GV96 52 aa8.79□□□□□ -1
RAB28-205ENST00000508274 F8WDY8 70 aa8.79□□□□□ -1
RAB28-205ENST00000508274 C2orf82Q6UX34 121 aa8.79□□□□□ -1
RAB28-205ENST00000508274 IMMP2LQ96T52 175 aa8.79□□□□□ -1
RAB28-205ENST00000508274 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
RAB28-205ENST00000508274 AMELXQ99217 191 aa8.78□□□□□ -1
RAB28-205ENST00000508274 IGIPA6NJ69 53 aa8.78□□□□□ -1
RAB28-205ENST00000508274 TLX1NBP0CAT3 122 aa8.78□□□□□ -1
RAB28-205ENST00000508274 ORMDL2Q53FV1 153 aa8.78□□□□□ -1
RAB28-205ENST00000508274 Q6ZN92 141 aa8.78□□□□□ -1
RAB28-205ENST00000508274 C2orf88Q9BSF0 95 aa8.78□□□□□ -1
RAB28-205ENST00000508274 MT-ND6P03923 174 aa8.77□□□□□ -1.01
RAB28-205ENST00000508274 GAGE2EQ4V326 116 aa8.77□□□□□ -1.01
RAB28-205ENST00000508274 REG3GQ6UW15 175 aa8.77□□□□□ -1.01
RAB28-205ENST00000508274 KRTAP11-1Q8IUC1 163 aa8.77□□□□□ -1.01
RAB28-205ENST00000508274 CBLN2Q8IUK8 224 aa8.77□□□□□ -1.01
RAB28-205ENST00000508274 NXT2Q9NPJ8 142 aaKnown RBP8.77□□□□□ -1.01
RAB28-205ENST00000508274 GAGE2DQ9UEU5 116 aa8.77□□□□□ -1.01
RAB28-205ENST00000508274 RHEBQ15382 184 aa8.76□□□□□ -1.01
RAB28-205ENST00000508274 FAM19A5Q7Z5A7 132 aaPredicted RBP8.76□□□□□ -1.01
RAB28-205ENST00000508274 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 769.5 ms