RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 C9JQL5 133 aa6.96□□□□□ -1.3
PTPN13-207ENST00000508063 HBBP68871 147 aa6.96□□□□□ -1.3
PTPN13-207ENST00000508063 PRR3P79522 188 aaKnown RBP6.96□□□□□ -1.3
PTPN13-207ENST00000508063 LINC00526Q96FQ7 95 aa6.96□□□□□ -1.3
PTPN13-207ENST00000508063 TNFRSF6BO95407 300 aa6.95□□□□□ -1.3
PTPN13-207ENST00000508063 PPBPP02775 128 aa6.95□□□□□ -1.3
PTPN13-207ENST00000508063 UQCC3Q6UW78 93 aa6.95□□□□□ -1.3
PTPN13-207ENST00000508063 CAMK2N2Q96S95 79 aa6.95□□□□□ -1.3
PTPN13-207ENST00000508063 KRTAP4-12Q9BQ66 201 aa6.95□□□□□ -1.3
PTPN13-207ENST00000508063 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 D6R8Y8 96 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 SRSF3P84103 164 aaKnown RBP6.94□□□□□ -1.3
PTPN13-207ENST00000508063 RNASE13Q5GAN3 156 aaKnown RBP6.94□□□□□ -1.3
PTPN13-207ENST00000508063 MRPL54Q6P161 138 aaKnown RBP6.94□□□□□ -1.3
PTPN13-207ENST00000508063 Q6ZUT4 128 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 C2orf48Q96LS8 159 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 SMIM2Q9BVW6 85 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 SPANXA1Q9NS26 97 aa6.94□□□□□ -1.3
PTPN13-207ENST00000508063 A0A1B0GXF2 115 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 F8WDY8 70 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 GAGE2BQ13066 116 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 Q6ZRP5 223 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 ATP5L2Q7Z4Y8 100 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 C5orf38Q86SI9 138 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
PTPN13-207ENST00000508063 RAB5AP20339 215 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 RPL39P62891 51 aaKnown RBP6.92□□□□□ -1.3
PTPN13-207ENST00000508063 MRPS36P82909 103 aaKnown RBP6.92□□□□□ -1.3
PTPN13-207ENST00000508063 SPAG11BQ08648 103 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 REG3GQ6UW15 175 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 SPINK6Q6UWN8 80 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 KRTAP19-1Q8IUB9 90 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 ORMDL3Q8N138 153 aa6.92□□□□□ -1.3
PTPN13-207ENST00000508063 NPYP01303 97 aa6.91□□□□□ -1.3
PTPN13-207ENST00000508063 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
PTPN13-207ENST00000508063 IFITM10A6NMD0 228 aa6.9□□□□□ -1.3
PTPN13-207ENST00000508063 IFI27P40305 119 aaPredicted RBP6.9□□□□□ -1.3
PTPN13-207ENST00000508063 RPL18AQ02543 176 aaKnown RBP6.9□□□□□ -1.3
PTPN13-207ENST00000508063 PNRC1Q12796 327 aaPredicted RBP6.9□□□□□ -1.3
PTPN13-207ENST00000508063 TMEM136Q6ZRR5 245 aa6.9□□□□□ -1.3
PTPN13-207ENST00000508063 TGIF2-C20orf24A0A0A6YYL0 155 aa6.89□□□□□ -1.31
PTPN13-207ENST00000508063 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.89□□□□□ -1.31
PTPN13-207ENST00000508063 ORAOV1Q8WV07 137 aa6.89□□□□□ -1.31
PTPN13-207ENST00000508063 PRELID3AQ96N28 172 aa6.89□□□□□ -1.31
PTPN13-207ENST00000508063 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
PTPN13-207ENST00000508063 MRPL35Q9NZE8 188 aaKnown RBP6.89□□□□□ -1.31
PTPN13-207ENST00000508063 LAMTOR2Q9Y2Q5 125 aa6.89□□□□□ -1.31
PTPN13-207ENST00000508063 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
PTPN13-207ENST00000508063 IGHV3OR16-9A0A0B4J2B5 98 aa6.88□□□□□ -1.31
PTPN13-207ENST00000508063 NDUFA1O15239 70 aa6.88□□□□□ -1.31
PTPN13-207ENST00000508063 MT-ND4LP03901 98 aa6.88□□□□□ -1.31
PTPN13-207ENST00000508063 C9orf116Q5BN46 136 aaPredicted RBP6.88□□□□□ -1.31
PTPN13-207ENST00000508063 ANAPC16Q96DE5 110 aa6.88□□□□□ -1.31
PTPN13-207ENST00000508063 MAP1LC3AQ9H492 121 aa6.88□□□□□ -1.31
PTPN13-207ENST00000508063 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
PTPN13-207ENST00000508063 A0A1W2PNN7 141 aa6.87□□□□□ -1.31
PTPN13-207ENST00000508063 TMEM218A2RU14 115 aa6.87□□□□□ -1.31
PTPN13-207ENST00000508063 PRSS47A8MTI9 375 aa6.87□□□□□ -1.31
PTPN13-207ENST00000508063 SRSF9Q13242 221 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPN13-207ENST00000508063 FAM104AQ969W3 186 aa6.87□□□□□ -1.31
PTPN13-207ENST00000508063 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
PTPN13-207ENST00000508063 MT-ND6P03923 174 aa6.86□□□□□ -1.31
PTPN13-207ENST00000508063 Q6ZN92 141 aa6.86□□□□□ -1.31
PTPN13-207ENST00000508063 TMEM141Q96I45 108 aa6.86□□□□□ -1.31
PTPN13-207ENST00000508063 C2orf88Q9BSF0 95 aa6.86□□□□□ -1.31
PTPN13-207ENST00000508063 IGLV4-3A0A075B6K6 122 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 A0A087WZ39 114 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 K7EMI3 77 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 TLX1NBP0CAT3 122 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 TEX43Q6ZNM6 134 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 SEC11CQ9BY50 192 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 CYSLTR1Q9Y271 337 aa6.85□□□□□ -1.31
PTPN13-207ENST00000508063 CARHSP1Q9Y2V2 147 aaKnown RBP6.85□□□□□ -1.31
PTPN13-207ENST00000508063 TNXBP22105 4242 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 APOC3P02656 99 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 G0S2P27469 103 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 ORMDL2Q53FV1 153 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 ANKRD39Q53RE8 183 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 LINC01561Q8N1V8 128 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 SVBPQ8N300 66 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 Q8N8P6 123 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 PSORS1C2Q9UIG4 136 aa6.84□□□□□ -1.31
PTPN13-207ENST00000508063 NPSP0C0P6 89 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 KRTAP10-8P60410 259 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 C10orf91Q5T1B1 145 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 LCE3BQ5TA77 95 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 UNQ6190/PRO20217Q6UXQ8 127 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 PHF5AQ7RTV0 110 aaKnown RBP6.83□□□□□ -1.32
PTPN13-207ENST00000508063 VCX2Q9H322 139 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 UBR4Q5T4S7 5183 aa6.83□□□□□ -1.32
PTPN13-207ENST00000508063 TRBV30A0A0K0K1B3 111 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 SNAPINO95295 136 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 PRSS2P07478 247 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 ADCYAP1P18509 176 aa6.82□□□□□ -1.32
PTPN13-207ENST00000508063 UBE2D1P51668 147 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms