RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 RNASEKQ6P5S7 137 aaKnown RBP8.56□□□□□ -1.04
DDR1-260ENST00000507533 MRPL52Q86TS9 123 aaKnown RBP8.55□□□□□ -1.04
DDR1-260ENST00000507533 C15orf56Q8N910 161 aa8.55□□□□□ -1.04
DDR1-260ENST00000507533 A0A096LNI7 61 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 SMAGPQ0VAQ4 97 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 CFAP161Q6P656 301 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 Q8N8P6 123 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 TMEM18Q96B42 140 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
DDR1-260ENST00000507533 MRPL18Q9H0U6 180 aaKnown RBP8.54□□□□□ -1.04
DDR1-260ENST00000507533 RAB5AP20339 215 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 FABP9Q0Z7S8 132 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 HIGD2BQ4VC39 106 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 ZNF664Q8N3J9 261 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 OR5A1Q8NGJ0 315 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 SMCO4Q9NRQ5 59 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
DDR1-260ENST00000507533 ALKBH7Q9BT30 221 aaPredicted RBP8.52□□□□□ -1.05
DDR1-260ENST00000507533 TIMM21Q9BVV7 248 aa8.52□□□□□ -1.05
DDR1-260ENST00000507533 NXT2Q9NPJ8 142 aaKnown RBP8.52□□□□□ -1.05
DDR1-260ENST00000507533 LINC00474Q9P2X8 69 aa8.52□□□□□ -1.05
DDR1-260ENST00000507533 UBE2D4Q9Y2X8 147 aa8.52□□□□□ -1.05
DDR1-260ENST00000507533 CSDC2Q9Y534 153 aaKnown RBP8.52□□□□□ -1.05
DDR1-260ENST00000507533 TRAPPC1Q9Y5R8 145 aa8.52□□□□□ -1.05
DDR1-260ENST00000507533 GAGE12HA6NDE8 117 aa8.51□□□□□ -1.05
DDR1-260ENST00000507533 PRR4Q16378 134 aa8.51□□□□□ -1.05
DDR1-260ENST00000507533 CBLN2Q8IUK8 224 aa8.51□□□□□ -1.05
DDR1-260ENST00000507533 CDC42SE2Q9NRR3 84 aa8.51□□□□□ -1.05
DDR1-260ENST00000507533 IGKV3OR2-268A0A0C4DH90 116 aa8.5□□□□□ -1.05
DDR1-260ENST00000507533 K7EMI3 77 aa8.5□□□□□ -1.05
DDR1-260ENST00000507533 IFI27P40305 119 aaPredicted RBP8.5□□□□□ -1.05
DDR1-260ENST00000507533 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
DDR1-260ENST00000507533 ORMDL2Q53FV1 153 aa8.49□□□□□ -1.05
DDR1-260ENST00000507533 PRR26Q8N8Z3 221 aa8.49□□□□□ -1.05
DDR1-260ENST00000507533 SPANXA1Q9NS26 97 aa8.48□□□□□ -1.05
DDR1-260ENST00000507533 LINC00959A0A1B0GUT2 108 aa8.47□□□□□ -1.05
DDR1-260ENST00000507533 G0S2P27469 103 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 MRPS36P82909 103 aaKnown RBP8.46□□□□□ -1.06
DDR1-260ENST00000507533 SS18Q15532 418 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 C2orf66Q6UXQ4 117 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 Q6ZUT4 128 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 CHCHD10Q8WYQ3 142 aaPredicted RBP8.46□□□□□ -1.06
DDR1-260ENST00000507533 CYSLTR1Q9Y271 337 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 PKIGQ9Y2B9 76 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 PYGO1Q9Y3Y4 419 aa8.46□□□□□ -1.06
DDR1-260ENST00000507533 GVQW2A0A096LPI5 108 aaPredicted RBP8.45□□□□□ -1.06
DDR1-260ENST00000507533 LINC01546A6NGU7 62 aa8.45□□□□□ -1.06
DDR1-260ENST00000507533 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
DDR1-260ENST00000507533 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
DDR1-260ENST00000507533 CCL25O15444 150 aa8.44□□□□□ -1.06
DDR1-260ENST00000507533 FA2HQ7L5A8 372 aa8.44□□□□□ -1.06
DDR1-260ENST00000507533 C18orf32Q8TCD1 76 aa8.44□□□□□ -1.06
DDR1-260ENST00000507533 OPRPNQ99935 248 aaPredicted RBP8.44□□□□□ -1.06
DDR1-260ENST00000507533 COLCA2A8K830 154 aa8.43□□□□□ -1.06
DDR1-260ENST00000507533 C1orf196B1AJZ1 125 aa8.43□□□□□ -1.06
DDR1-260ENST00000507533 XCL1P47992 114 aa8.43□□□□□ -1.06
DDR1-260ENST00000507533 IGLV4-3A0A075B6K6 122 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 TRAV13-1A0A0B4J241 112 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 NPSP0C0P6 89 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 FOXI1Q12951 378 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 TOMM6Q96B49 74 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 LINC00526Q96FQ7 95 aa8.42□□□□□ -1.06
DDR1-260ENST00000507533 LINC01549A6NIU2 74 aa8.41□□□□□ -1.06
DDR1-260ENST00000507533 IGIPA6NJ69 53 aa8.41□□□□□ -1.06
DDR1-260ENST00000507533 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
DDR1-260ENST00000507533 TMEM141Q96I45 108 aa8.41□□□□□ -1.06
DDR1-260ENST00000507533 CARD19Q96LW7 228 aa8.41□□□□□ -1.06
DDR1-260ENST00000507533 IFITM10A6NMD0 228 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 SCO1O75880 301 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 TRGC2P03986 189 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 LINC00614P0C842 121 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 RAB5BP61020 215 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 DIRC1Q969H9 104 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 URB1-AS1Q96HZ7 61 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
DDR1-260ENST00000507533 A0A1W2PNN7 141 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 PTTG1IPP53801 180 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 Q6ZN92 141 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 TEX43Q6ZNM6 134 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 ERASQ7Z444 233 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 SCGB3A1Q96QR1 104 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 AMELXQ99217 191 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 VCX2Q9H322 139 aa8.39□□□□□ -1.07
DDR1-260ENST00000507533 IGLV1-50A0A075B6I6 118 aa8.38□□□□□ -1.07
DDR1-260ENST00000507533 GAGE2BQ13066 116 aa8.38□□□□□ -1.07
DDR1-260ENST00000507533 IGHV1-58A0A0C4DH39 117 aa8.37□□□□□ -1.07
DDR1-260ENST00000507533 LINC00173Q6ZV60 143 aa8.37□□□□□ -1.07
DDR1-260ENST00000507533 C2orf88Q9BSF0 95 aa8.37□□□□□ -1.07
DDR1-260ENST00000507533 A0A096LNJ9 63 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 COX7A2LO14548 114 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 IGLV7-43P04211 117 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 S100A1P23297 94 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 UBE2D1P51668 147 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 SYCNQ0VAF6 134 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 ZC2HC1BQ5TFG8 222 aa8.36□□□□□ -1.07
DDR1-260ENST00000507533 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms