RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 GAGE2BQ13066 116 aa10.4□□□□□ -0.74
PDLIM7-215ENST00000506161 C10orf25Q5T742 122 aa10.4□□□□□ -0.74
PDLIM7-215ENST00000506161 TMEM18Q96B42 140 aa10.4□□□□□ -0.74
PDLIM7-215ENST00000506161 SPANXA1Q9NS26 97 aa10.4□□□□□ -0.74
PDLIM7-215ENST00000506161 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 PRSS47A8MTI9 375 aa10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 PNRC1Q12796 327 aaPredicted RBP10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 CLLU1Q5K131 121 aa10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 ANAPC16Q96DE5 110 aa10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 CAMK2N2Q96S95 79 aa10.39□□□□□ -0.75
PDLIM7-215ENST00000506161 TNXBP22105 4242 aa10.38□□□□□ -0.75
PDLIM7-215ENST00000506161 LINC00173Q6ZV60 143 aa10.38□□□□□ -0.75
PDLIM7-215ENST00000506161 C7orf33Q8WU49 177 aa10.38□□□□□ -0.75
PDLIM7-215ENST00000506161 ORAOV1Q8WV07 137 aa10.38□□□□□ -0.75
PDLIM7-215ENST00000506161 C2orf48Q96LS8 159 aa10.38□□□□□ -0.75
PDLIM7-215ENST00000506161 LOC107984640A0A0U1RRK4 108 aa10.37□□□□□ -0.75
PDLIM7-215ENST00000506161 IFITM10A6NMD0 228 aa10.37□□□□□ -0.75
PDLIM7-215ENST00000506161 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
PDLIM7-215ENST00000506161 MT-ND4LP03901 98 aa10.36□□□□□ -0.75
PDLIM7-215ENST00000506161 RAB14P61106 215 aa10.36□□□□□ -0.75
PDLIM7-215ENST00000506161 LINC00242Q5T6M2 205 aa10.36□□□□□ -0.75
PDLIM7-215ENST00000506161 APOMO95445 188 aa10.35□□□□□ -0.75
PDLIM7-215ENST00000506161 KIAA0087Q14695 138 aa10.35□□□□□ -0.75
PDLIM7-215ENST00000506161 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
PDLIM7-215ENST00000506161 PYGO1Q9Y3Y4 419 aa10.35□□□□□ -0.75
PDLIM7-215ENST00000506161 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 KIAA1644Q3SXP7 199 aa10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 KRTAP11-1Q8IUC1 163 aa10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 Q8N8P6 123 aa10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 MAP1LC3AQ9H492 121 aa10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 LINC00474Q9P2X8 69 aa10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 C6orf48Q9UBA6 75 aa10.34□□□□□ -0.75
PDLIM7-215ENST00000506161 FAM168BA1KXE4 195 aa10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 RAB5AP20339 215 aa10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 IFI27P40305 119 aaPredicted RBP10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 C2orf66Q6UXQ4 117 aa10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 OR10D4PQ8NGN7 298 aa10.33□□□□□ -0.76
PDLIM7-215ENST00000506161 LRP2P98164 4655 aa10.32□□□□□ -0.76
PDLIM7-215ENST00000506161 UBE2D1P51668 147 aa10.32□□□□□ -0.76
PDLIM7-215ENST00000506161 SRSF9Q13242 221 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDLIM7-215ENST00000506161 TMEM141Q96I45 108 aa10.32□□□□□ -0.76
PDLIM7-215ENST00000506161 MRPL35Q9NZE8 188 aaKnown RBP10.32□□□□□ -0.76
PDLIM7-215ENST00000506161 LAMTOR2Q9Y2Q5 125 aa10.32□□□□□ -0.76
PDLIM7-215ENST00000506161 A0A087WZ39 114 aa10.31□□□□□ -0.76
PDLIM7-215ENST00000506161 TMEM218A2RU14 115 aa10.31□□□□□ -0.76
PDLIM7-215ENST00000506161 Q6ZRP5 223 aa10.31□□□□□ -0.76
PDLIM7-215ENST00000506161 IMMP2LQ96T52 175 aa10.31□□□□□ -0.76
PDLIM7-215ENST00000506161 AMELXQ99217 191 aa10.31□□□□□ -0.76
PDLIM7-215ENST00000506161 IGIPA6NJ69 53 aa10.3□□□□□ -0.76
PDLIM7-215ENST00000506161 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
PDLIM7-215ENST00000506161 C2orf82Q6UX34 121 aa10.3□□□□□ -0.76
PDLIM7-215ENST00000506161 LINC01600Q96MT4 127 aa10.29□□□□□ -0.76
PDLIM7-215ENST00000506161 CYSLTR1Q9Y271 337 aa10.29□□□□□ -0.76
PDLIM7-215ENST00000506161 PKIGQ9Y2B9 76 aa10.29□□□□□ -0.76
PDLIM7-215ENST00000506161 NDUFA1O15239 70 aa10.28□□□□□ -0.76
PDLIM7-215ENST00000506161 PSORS1C2Q9UIG4 136 aa10.28□□□□□ -0.76
PDLIM7-215ENST00000506161 TGIF2-C20orf24A0A0A6YYL0 155 aa10.27□□□□□ -0.77
PDLIM7-215ENST00000506161 TEX43Q6ZNM6 134 aa10.27□□□□□ -0.77
PDLIM7-215ENST00000506161 CTDSP1Q9GZU7 261 aa10.27□□□□□ -0.77
PDLIM7-215ENST00000506161 TLX1NBP0CAT3 122 aa10.26□□□□□ -0.77
PDLIM7-215ENST00000506161 UQCC3Q6UW78 93 aa10.26□□□□□ -0.77
PDLIM7-215ENST00000506161 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
PDLIM7-215ENST00000506161 SPINK6Q6UWN8 80 aa10.25□□□□□ -0.77
PDLIM7-215ENST00000506161 FAM19A3Q7Z5A8 133 aa10.25□□□□□ -0.77
PDLIM7-215ENST00000506161 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
PDLIM7-215ENST00000506161 KRTAP10-8P60410 259 aa10.24□□□□□ -0.77
PDLIM7-215ENST00000506161 ORMDL2Q53FV1 153 aa10.24□□□□□ -0.77
PDLIM7-215ENST00000506161 COMMD7Q86VX2 200 aa10.24□□□□□ -0.77
PDLIM7-215ENST00000506161 F8WDY8 70 aa10.23□□□□□ -0.77
PDLIM7-215ENST00000506161 C9orf129Q5T035 196 aaKnown RBP10.23□□□□□ -0.77
PDLIM7-215ENST00000506161 FAM19A5Q7Z5A7 132 aaPredicted RBP10.23□□□□□ -0.77
PDLIM7-215ENST00000506161 TOMM6Q96B49 74 aa10.23□□□□□ -0.77
PDLIM7-215ENST00000506161 SEC11CQ9BY50 192 aa10.23□□□□□ -0.77
PDLIM7-215ENST00000506161 NXT2Q9NPJ8 142 aaKnown RBP10.23□□□□□ -0.77
PDLIM7-215ENST00000506161 VCX2Q9H322 139 aa10.22□□□□□ -0.77
PDLIM7-215ENST00000506161 CDKN2A-AS1Q9UH64 79 aa10.22□□□□□ -0.77
PDLIM7-215ENST00000506161 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.77
PDLIM7-215ENST00000506161 C2orf88Q9BSF0 95 aa10.21□□□□□ -0.77
PDLIM7-215ENST00000506161 ALKBH7Q9BT30 221 aaPredicted RBP10.21□□□□□ -0.77
PDLIM7-215ENST00000506161 TRAV9-1A0A075B6T8 112 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 K7EMI3 77 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 C1orf137Q5JT78 98 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 Q6ZN92 141 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 LINC01561Q8N1V8 128 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 TOMM7Q9P0U1 55 aa10.2□□□□□ -0.78
PDLIM7-215ENST00000506161 TRBV30A0A0K0K1B3 111 aa10.19□□□□□ -0.78
PDLIM7-215ENST00000506161 MT-ND6P03923 174 aa10.19□□□□□ -0.78
PDLIM7-215ENST00000506161 TIMM17AQ99595 171 aa10.19□□□□□ -0.78
PDLIM7-215ENST00000506161 GNB1LQ9BYB4 327 aa10.19□□□□□ -0.78
PDLIM7-215ENST00000506161 NPSP0C0P6 89 aa10.18□□□□□ -0.78
PDLIM7-215ENST00000506161 URB1-AS1Q96HZ7 61 aa10.18□□□□□ -0.78
PDLIM7-215ENST00000506161 LINC00469Q8N7U9 141 aa10.17□□□□□ -0.78
PDLIM7-215ENST00000506161 CARHSP1Q9Y2V2 147 aaKnown RBP10.17□□□□□ -0.78
PDLIM7-215ENST00000506161 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
PDLIM7-215ENST00000506161 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms