RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 IGLV10-54A0A075B6I4 117 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 TRAV9-1A0A075B6T8 112 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 IGKV2-24A0A0C4DH68 120 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 TRBV6-5A0A0K0K1A5 114 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 A0A1B0GUV1 79 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 SMIM27A0A1W2PRY6 76 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 hDV102S1A0JD36 115 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00862A6NCI5 91 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 D6R8Y8 96 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 M0R2T5 61 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 CFC1P0CG37 223 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 FGF6P10767 208 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 RAB5AP20339 215 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 IFI27P40305 119 aaPredicted RBP1.89□□□□□ -2.11
TCOF1-208ENST00000506063 RPL13AP40429 203 aaKnown RBP1.89□□□□□ -2.11
TCOF1-208ENST00000506063 FOXA3P55318 350 aaPredicted RBP1.89□□□□□ -2.11
TCOF1-208ENST00000506063 SEC61BP60468 96 aaKnown RBP1.89□□□□□ -2.11
TCOF1-208ENST00000506063 RHEBQ15382 184 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 CFAP161Q6P656 301 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 Q6ZN92 141 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00269Q8N2A0 174 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 DIRC1Q969H9 104 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 C20orf78Q9BR46 151 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 C2orf88Q9BSF0 95 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 SMIM2Q9BVW6 85 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 CTDSP1Q9GZU7 261 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 PPDPFQ9H3Y8 114 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 SPANXA1Q9NS26 97 aa1.89□□□□□ -2.11
TCOF1-208ENST00000506063 IGLV4-60A0A075B6I1 120 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 A0A087X002 238 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 TGIF2-C20orf24A0A0A6YYL0 155 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 TRBV27A0A0K0K1C4 114 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 A0A1B0GXF2 115 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 IFITM10A6NMD0 228 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 C9JQL5 133 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 SMKR1H3BMG3 65 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 VCYO14598 125 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 SNAPINO95295 136 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 TNFRSF6BO95407 300 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 APOMO95445 188 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 TSHBP01222 138 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 MT-ND6P03923 174 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 IGLV7-43P04211 117 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 RAB4AP20338 218 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 MALP21145 153 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 KRTAP5-9P26371 169 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 G0S2P27469 103 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 RPS10P46783 165 aaKnown RBP1.88□□□□□ -2.11
TCOF1-208ENST00000506063 XCL1P47992 114 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 RPL32P62910 135 aaKnown RBP1.88□□□□□ -2.11
TCOF1-208ENST00000506063 SS18Q15532 418 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 COX19Q49B96 90 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 MRPL51Q4U2R6 128 aaKnown RBP1.88□□□□□ -2.11
TCOF1-208ENST00000506063 ORMDL2Q53FV1 153 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 PAPPA-AS1Q5QFB9 102 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 FAM104BQ5XKR9 115 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 NTM-AS1Q6ZSK4 140 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 Q6ZUT4 128 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 KRTAP11-1Q8IUC1 163 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 SVBPQ8N300 66 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 C20orf203Q8NBC4 194 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 CLRN3Q8NCR9 226 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 CHCHD10Q8WYQ3 142 aaPredicted RBP1.88□□□□□ -2.11
TCOF1-208ENST00000506063 PRELID3AQ96N28 172 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 SEC11CQ9BY50 192 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 SMCO4Q9NRQ5 59 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 PRR34Q9NV39 138 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 CYSLTR1Q9Y271 337 aa1.88□□□□□ -2.11
TCOF1-208ENST00000506063 TRAV13-1A0A0B4J241 112 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 IGHV1-58A0A0C4DH39 117 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 TMEM218A2RU14 115 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 GAGE12HA6NDE8 117 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 LINC01549A6NIU2 74 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 ZNF561-AS1K7EIQ3 104 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 K7EMI3 77 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 COX7A2LO14548 114 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 CCL25O15444 150 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 NPYP01303 97 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 ADCYAP1P18509 176 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 UBE2D1P51668 147 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 HIGD2BQ4VC39 106 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 TEX43Q6ZNM6 134 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 TMEM136Q6ZRR5 245 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 FA2HQ7L5A8 372 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 MRPL52Q86TS9 123 aaKnown RBP1.87□□□□□ -2.11
TCOF1-208ENST00000506063 NRACQ8N912 160 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 CARD19Q96LW7 228 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 PACRGQ96M98 296 aaPredicted RBP1.87□□□□□ -2.11
TCOF1-208ENST00000506063 IMMP2LQ96T52 175 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 TIMM21Q9BVV7 248 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 NXT2Q9NPJ8 142 aaKnown RBP1.87□□□□□ -2.11
TCOF1-208ENST00000506063 RPS10P5Q9NQ39 176 aa1.87□□□□□ -2.11
TCOF1-208ENST00000506063 CARHSP1Q9Y2V2 147 aaKnown RBP1.87□□□□□ -2.11
TCOF1-208ENST00000506063 TRBV24-1A0A075B6N3 115 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 GVQW2A0A096LPI5 108 aaPredicted RBP1.86□□□□□ -2.11
TCOF1-208ENST00000506063 LOC389332A0A1B0GUA5 103 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 LINC00959A0A1B0GUT2 108 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 A0A1W2PNN7 141 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 C1orf196B1AJZ1 125 aa1.86□□□□□ -2.11
TCOF1-208ENST00000506063 APOC3P02656 99 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms