RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 SRRM2Q9UQ35 2752 aaKnown RBP6.79□□□□□ -1.32
NR1I3-222ENST00000506018 VPS13BQ7Z7G8 4022 aa6.78□□□□□ -1.32
NR1I3-222ENST00000506018 IGLV10-54A0A075B6I4 117 aa6.78□□□□□ -1.32
NR1I3-222ENST00000506018 ATP5LO75964 103 aa6.78□□□□□ -1.32
NR1I3-222ENST00000506018 SNRPEP62304 92 aaKnown RBP6.78□□□□□ -1.32
NR1I3-222ENST00000506018 AMMECR1LQ6DCA0 310 aa6.78□□□□□ -1.32
NR1I3-222ENST00000506018 C2orf66Q6UXQ4 117 aa6.78□□□□□ -1.32
NR1I3-222ENST00000506018 TMEM101Q96IK0 257 aa6.78□□□□□ -1.32
NR1I3-222ENST00000506018 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-222ENST00000506018 hDV102S1A0JD36 115 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 C5orf52A6NGY3 159 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 LEPROTL1O95214 131 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 PRSS1P07477 247 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 NPSP0C0P6 89 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 ZNF25P17030 456 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-222ENST00000506018 CIRBP-AS1Q8TBR5 109 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 TOMM6Q96B49 74 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 URB1-AS1Q96HZ7 61 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
NR1I3-222ENST00000506018 DNAH8Q96JB1 4490 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 IGLV4-60A0A075B6I1 120 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 LOC100996750A0A140TA64 210 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.76□□□□□ -1.33
NR1I3-222ENST00000506018 CFAP161Q6P656 301 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 Q6ZN92 141 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 ERASQ7Z444 233 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 FAM19A2Q8N3H0 131 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 C9orf163Q8N9P6 203 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 TMEM141Q96I45 108 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 SCGB3A1Q96QR1 104 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 TIMM21Q9BVV7 248 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 KRTAP4-6Q9BYQ5 205 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 PYGO1Q9Y3Y4 419 aa6.76□□□□□ -1.33
NR1I3-222ENST00000506018 CSDC2Q9Y534 153 aaKnown RBP6.76□□□□□ -1.33
NR1I3-222ENST00000506018 KRTAP26-1Q6PEX3 210 aa6.75□□□□□ -1.33
NR1I3-222ENST00000506018 HIST3H2BBQ8N257 126 aa6.75□□□□□ -1.33
NR1I3-222ENST00000506018 TIMM17AQ99595 171 aa6.75□□□□□ -1.33
NR1I3-222ENST00000506018 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-222ENST00000506018 IGKV2-29A2NJV5 120 aaPredicted RBP6.74□□□□□ -1.33
NR1I3-222ENST00000506018 NUPR1O60356 82 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 FGF6P10767 208 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 FABP4P15090 132 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 LINC00310P59036 64 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 CNBPP62633 177 aaKnown RBP6.74□□□□□ -1.33
NR1I3-222ENST00000506018 PMCHL1Q16048 86 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 PDZD11Q5EBL8 140 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 MRPL52Q86TS9 123 aaKnown RBP6.74□□□□□ -1.33
NR1I3-222ENST00000506018 OR5A1Q8NGJ0 315 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 MAP1LC3CQ9BXW4 147 aa6.74□□□□□ -1.33
NR1I3-222ENST00000506018 IGHV3-64A0A075B6Q5 118 aa6.73□□□□□ -1.33
NR1I3-222ENST00000506018 IGKV3OR2-268A0A0C4DH90 116 aa6.73□□□□□ -1.33
NR1I3-222ENST00000506018 AKR1D1P51857 326 aa6.73□□□□□ -1.33
NR1I3-222ENST00000506018 RPL39P62891 51 aaKnown RBP6.73□□□□□ -1.33
NR1I3-222ENST00000506018 IFI27L1Q96BM0 104 aa6.73□□□□□ -1.33
NR1I3-222ENST00000506018 DPH3Q96FX2 82 aa6.73□□□□□ -1.33
NR1I3-222ENST00000506018 GAGE12HA6NDE8 117 aa6.72□□□□□ -1.33
NR1I3-222ENST00000506018 MRPS36P82909 103 aaKnown RBP6.72□□□□□ -1.33
NR1I3-222ENST00000506018 HIST1H2BLQ99880 126 aa6.72□□□□□ -1.33
NR1I3-222ENST00000506018 C2orf88Q9BSF0 95 aa6.72□□□□□ -1.33
NR1I3-222ENST00000506018 VCX2Q9H322 139 aa6.72□□□□□ -1.33
NR1I3-222ENST00000506018 UBE2D4Q9Y2X8 147 aa6.72□□□□□ -1.33
NR1I3-222ENST00000506018 A0A096LNJ9 63 aa6.71□□□□□ -1.33
NR1I3-222ENST00000506018 C20orf202A1L168 122 aa6.71□□□□□ -1.33
NR1I3-222ENST00000506018 IGIPA6NJ69 53 aa6.71□□□□□ -1.33
NR1I3-222ENST00000506018 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.33
NR1I3-222ENST00000506018 RPL37AP61513 92 aaKnown RBP6.71□□□□□ -1.33
NR1I3-222ENST00000506018 TEX43Q6ZNM6 134 aa6.71□□□□□ -1.33
NR1I3-222ENST00000506018 ZNF664Q8N3J9 261 aa6.71□□□□□ -1.33
NR1I3-222ENST00000506018 MYCBP2O75592 4640 aa6.71□□□□□ -1.33
NR1I3-222ENST00000506018 CCL25O15444 150 aa6.7□□□□□ -1.34
NR1I3-222ENST00000506018 PMVKQ15126 192 aa6.7□□□□□ -1.34
NR1I3-222ENST00000506018 SDIM1Q6ZPB5 146 aa6.7□□□□□ -1.34
NR1I3-222ENST00000506018 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
NR1I3-222ENST00000506018 PKIGQ9Y2B9 76 aa6.7□□□□□ -1.34
NR1I3-222ENST00000506018 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 H3BS24 57 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 SEC11AP67812 179 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 CDC42SE2Q9NRR3 84 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 TRAV12-1A0A0B4J245 112 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 OXTP01178 125 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 KRTDAPP60985 99 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 SS18Q15532 418 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
NR1I3-222ENST00000506018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.69□□□□□ -1.34
NR1I3-222ENST00000506018 HERC1Q15751 4861 aa6.68□□□□□ -1.34
NR1I3-222ENST00000506018 SYS1-DBNDD2H3BUS1 97 aa6.68□□□□□ -1.34
NR1I3-222ENST00000506018 C15orf56Q8N910 161 aa6.68□□□□□ -1.34
NR1I3-222ENST00000506018 OR10D4PQ8NGN7 298 aa6.68□□□□□ -1.34
NR1I3-222ENST00000506018 AMELXQ99217 191 aa6.68□□□□□ -1.34
NR1I3-222ENST00000506018 GVQW2A0A096LPI5 108 aaPredicted RBP6.67□□□□□ -1.34
NR1I3-222ENST00000506018 IFITM10A6NMD0 228 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 H0Y8G0 127 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 XCL1P47992 114 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 CIRBPQ14011 172 aaKnown RBP6.67□□□□□ -1.34
NR1I3-222ENST00000506018 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 Q6ZUT4 128 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 CST9LQ9H4G1 147 aa6.67□□□□□ -1.34
NR1I3-222ENST00000506018 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
NR1I3-222ENST00000506018 IGHV1-58A0A0C4DH39 117 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 195 ms