RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 LAMTOR2Q9Y2Q5 125 aa6.2□□□□□ -1.42
NEDD9-210ENST00000505589 C5orf52A6NGY3 159 aa6.19□□□□□ -1.42
NEDD9-210ENST00000505589 SMKR1H3BMG3 65 aa6.19□□□□□ -1.42
NEDD9-210ENST00000505589 BAGE3Q86Y29 109 aa6.19□□□□□ -1.42
NEDD9-210ENST00000505589 PRSS3P2Q8NHM4 247 aa6.19□□□□□ -1.42
NEDD9-210ENST00000505589 TRAV26-2A0A0B4J265 109 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 M0QY20 66 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 NPYP01303 97 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 SNRPEP62304 92 aaKnown RBP6.18□□□□□ -1.42
NEDD9-210ENST00000505589 COTL1Q14019 142 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 SUMO4Q6EEV6 95 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 NRACQ8N912 160 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 NIT2Q9NQR4 276 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 PSORS1C2Q9UIG4 136 aa6.18□□□□□ -1.42
NEDD9-210ENST00000505589 IGLV4-60A0A075B6I1 120 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 H7C423 109 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 SERF1AO75920 110 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 TNFRSF6BO95407 300 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 PPP1R17O96001 155 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 ESDP10768 282 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 LINC00310P59036 64 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 HIST3H2BBQ8N257 126 aa6.17□□□□□ -1.42
NEDD9-210ENST00000505589 GVQW2A0A096LPI5 108 aaPredicted RBP6.16□□□□□ -1.42
NEDD9-210ENST00000505589 AMTP48728 403 aa6.16□□□□□ -1.42
NEDD9-210ENST00000505589 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
NEDD9-210ENST00000505589 RNASEKQ6P5S7 137 aaKnown RBP6.16□□□□□ -1.42
NEDD9-210ENST00000505589 MAP1LC3AQ9H492 121 aa6.16□□□□□ -1.42
NEDD9-210ENST00000505589 LOC105371267A0A1B0GV96 52 aa6.15□□□□□ -1.42
NEDD9-210ENST00000505589 ZNF561-AS1K7EIQ3 104 aa6.15□□□□□ -1.42
NEDD9-210ENST00000505589 PMCHP20382 165 aa6.15□□□□□ -1.42
NEDD9-210ENST00000505589 C15orf56Q8N910 161 aa6.15□□□□□ -1.42
NEDD9-210ENST00000505589 CHCHD1Q96BP2 118 aaKnown RBP6.15□□□□□ -1.42
NEDD9-210ENST00000505589 RPL39LQ96EH5 51 aaKnown RBP6.15□□□□□ -1.42
NEDD9-210ENST00000505589 URB1-AS1Q96HZ7 61 aa6.15□□□□□ -1.42
NEDD9-210ENST00000505589 C20orf78Q9BR46 151 aa6.15□□□□□ -1.42
NEDD9-210ENST00000505589 IGHV1-58A0A0C4DH39 117 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 TRBV6-5A0A0K0K1A5 114 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 LOC389332A0A1B0GUA5 103 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 IFITM10A6NMD0 228 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 PRSS47A8MTI9 375 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 IFI27P40305 119 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-210ENST00000505589 SUMO2P61956 95 aaKnown RBP6.14□□□□□ -1.43
NEDD9-210ENST00000505589 RPL32P62910 135 aaKnown RBP6.14□□□□□ -1.43
NEDD9-210ENST00000505589 HIGD2BQ4VC39 106 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 PDZD11Q5EBL8 140 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 FA2HQ7L5A8 372 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 Q8N8P6 123 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 CHCHD10Q8WYQ3 142 aaPredicted RBP6.14□□□□□ -1.43
NEDD9-210ENST00000505589 SMIM2Q9BVW6 85 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 ST20Q9HBF5 79 aa6.14□□□□□ -1.43
NEDD9-210ENST00000505589 NXT2Q9NPJ8 142 aaKnown RBP6.14□□□□□ -1.43
NEDD9-210ENST00000505589 A0A096LNI7 61 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 IGKV3OR2-268A0A0C4DH90 116 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 NUPR1O60356 82 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 HSBP1O75506 76 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 LINC00614P0C842 121 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 ZNF25P17030 456 aaPredicted RBP6.13□□□□□ -1.43
NEDD9-210ENST00000505589 S100A2P29034 98 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 CARD19Q96LW7 228 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 HIST1H2BLQ99880 126 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 LPAP08519 4548 aa6.13□□□□□ -1.43
NEDD9-210ENST00000505589 LINC01546A6NGU7 62 aa6.12□□□□□ -1.43
NEDD9-210ENST00000505589 TMEM18Q96B42 140 aa6.12□□□□□ -1.43
NEDD9-210ENST00000505589 PACRGQ96M98 296 aaPredicted RBP6.12□□□□□ -1.43
NEDD9-210ENST00000505589 TRBV27A0A0K0K1C4 114 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 SDHAF1A6NFY7 115 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 K7EMI3 77 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 FGF6P10767 208 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 FABP4P15090 132 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 POLR2KP53803 58 aaKnown RBP6.11□□□□□ -1.43
NEDD9-210ENST00000505589 SYCNQ0VAF6 134 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 SS18Q15532 418 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 OR5A1Q8NGJ0 315 aa6.11□□□□□ -1.43
NEDD9-210ENST00000505589 VCYO14598 125 aa6.1□□□□□ -1.43
NEDD9-210ENST00000505589 CCL25O15444 150 aa6.1□□□□□ -1.43
NEDD9-210ENST00000505589 FAM19A2Q8N3H0 131 aa6.1□□□□□ -1.43
NEDD9-210ENST00000505589 DIRC1Q969H9 104 aa6.1□□□□□ -1.43
NEDD9-210ENST00000505589 A0A096LNJ9 63 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 I3L3M4 83 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 TCAPO15273 167 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 HBDP02042 147 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 PTTG1IPP53801 180 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 FOXI1Q12951 378 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 GAGE2BQ13066 116 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 PMCHL1Q16048 86 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 ORMDL2Q53FV1 153 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 KIR2DL4Q99706 377 aa6.09□□□□□ -1.43
NEDD9-210ENST00000505589 IGLV4-69A0A075B6H9 119 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 IGLV1-50A0A075B6I6 118 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 TSHBP01222 138 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 MALP21145 153 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 FCER1GP30273 86 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 XCL1P47992 114 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 AKR1D1P51857 326 aa6.08□□□□□ -1.44
NEDD9-210ENST00000505589 C1orf137Q5JT78 98 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms