RNA–Protein interactions for RNA: ENST00000504672.5

PDGFC-204, Transcript of platelet derived growth factor C, humanhuman

TSL 5

Gene PDGFC, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-204ENST00000504672 TRAV26-2A0A0B4J265 109 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 SDHAF1A6NFY7 115 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 D6R8Y8 96 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 K7EMI3 77 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 TNFRSF6BO95407 300 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 SUMO2P61956 95 aaKnown RBP5.56□□□□□ -1.52
PDGFC-204ENST00000504672 IQCJQ1A5X6 159 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 PRR26Q8N8Z3 221 aa5.56□□□□□ -1.52
PDGFC-204ENST00000504672 ALKBH7Q9BT30 221 aaPredicted RBP5.56□□□□□ -1.52
PDGFC-204ENST00000504672 F5H697 171 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 TCAPO15273 167 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 APCSP02743 223 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 MGPP08493 103 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 ESDP10768 282 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 RAB5AP20339 215 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 CKS2P33552 79 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 SSTP61278 116 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 REG3AQ06141 175 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 HIGD2BQ4VC39 106 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
PDGFC-204ENST00000504672 PRELID3AQ96N28 172 aa5.55□□□□□ -1.52
PDGFC-204ENST00000504672 A0A096LNI7 61 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 H7C423 109 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 VCYO14598 125 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 SCO1O75880 301 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 NPYP01303 97 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 Q6ZRP5 223 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 SMIM2Q9BVW6 85 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 ST20Q9HBF5 79 aa5.54□□□□□ -1.52
PDGFC-204ENST00000504672 A0A1B0GUV1 79 aa5.53□□□□□ -1.52
PDGFC-204ENST00000504672 SMKR1H3BMG3 65 aa5.53□□□□□ -1.52
PDGFC-204ENST00000504672 I3L3M4 83 aa5.53□□□□□ -1.52
PDGFC-204ENST00000504672 TSHBP01222 138 aa5.53□□□□□ -1.52
PDGFC-204ENST00000504672 TRAPPC1Q9Y5R8 145 aa5.53□□□□□ -1.52
PDGFC-204ENST00000504672 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 PKIAP61925 76 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 FABP9Q0Z7S8 132 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 MRPL52Q86TS9 123 aaKnown RBP5.52□□□□□ -1.53
PDGFC-204ENST00000504672 Q8N8P6 123 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 C15orf56Q8N910 161 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 C18orf32Q8TCD1 76 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 TIMM21Q9BVV7 248 aa5.52□□□□□ -1.53
PDGFC-204ENST00000504672 NXT2Q9NPJ8 142 aaKnown RBP5.52□□□□□ -1.53
PDGFC-204ENST00000504672 CSDC2Q9Y534 153 aaKnown RBP5.52□□□□□ -1.53
PDGFC-204ENST00000504672 IGLV4-60A0A075B6I1 120 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 TRAV8-4A0A0B4J246 113 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 TRGC2P03986 189 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 NPSP0C0P6 89 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 COTL1Q14019 142 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.51□□□□□ -1.53
PDGFC-204ENST00000504672 URB1-AS1Q96HZ7 61 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 MAP1LC3AQ9H492 121 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 PSORS1C2Q9UIG4 136 aa5.51□□□□□ -1.53
PDGFC-204ENST00000504672 TRBV25-1A0A075B6N4 114 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 IGHV1-24A0A0C4DH33 117 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 IGKV3OR2-268A0A0C4DH90 116 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 LINC01549A6NIU2 74 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 PMCHP20382 165 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 KIAA1644Q3SXP7 199 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 COA6Q5JTJ3 125 aaKnown RBP5.5□□□□□ -1.53
PDGFC-204ENST00000504672 ZNF664Q8N3J9 261 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 FAM104AQ969W3 186 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 LINC00526Q96FQ7 95 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 KIR2DL4Q99706 377 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
PDGFC-204ENST00000504672 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
PDGFC-204ENST00000504672 CFAP161Q6P656 301 aa5.49□□□□□ -1.53
PDGFC-204ENST00000504672 CRCT1Q9UGL9 99 aa5.49□□□□□ -1.53
PDGFC-204ENST00000504672 A0A096LNJ9 63 aa5.48□□□□□ -1.53
PDGFC-204ENST00000504672 IFI27P40305 119 aaPredicted RBP5.48□□□□□ -1.53
PDGFC-204ENST00000504672 LINC00310P59036 64 aa5.48□□□□□ -1.53
PDGFC-204ENST00000504672 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
PDGFC-204ENST00000504672 ORMDL2Q53FV1 153 aa5.48□□□□□ -1.53
PDGFC-204ENST00000504672 CHCHD1Q96BP2 118 aaKnown RBP5.48□□□□□ -1.53
PDGFC-204ENST00000504672 TMEM243Q9BU79 118 aa5.48□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BKO60814 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BJP06899 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 LINC00614P0C842 121 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BOP23527 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 G0S2P27469 103 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BBP33778 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 AMTP48728 403 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BDP58876 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 RAB5BP61020 215 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BCP62807 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST2H2BEQ16778 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BHQ93079 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BNQ99877 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 HIST1H2BMQ99879 126 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 UBE2D4Q9Y2X8 147 aa5.47□□□□□ -1.53
PDGFC-204ENST00000504672 A0A1W2PNN7 141 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 IGIPA6NJ69 53 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 FCER1GP30273 86 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 C1orf137Q5JT78 98 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 FAM19A3Q7Z5A8 133 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 TOMM6Q96B49 74 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 TIMM17AQ99595 171 aa5.46□□□□□ -1.54
PDGFC-204ENST00000504672 SPANXA1Q9NS26 97 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms