RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 Q6ZRU5 148 aa9.03□□□□□ -0.96
HOXC9-202ENST00000504557 Q8N8P6 123 aa9.03□□□□□ -0.96
HOXC9-202ENST00000504557 SEC11CQ9BY50 192 aa9.03□□□□□ -0.96
HOXC9-202ENST00000504557 IGLV4-3A0A075B6K6 122 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 S100PP25815 95 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 HNRNPA3P51991 378 aaKnown RBP9.02□□□□□ -0.97
HOXC9-202ENST00000504557 MRPS36P82909 103 aaKnown RBP9.02□□□□□ -0.97
HOXC9-202ENST00000504557 GAGE2BQ13066 116 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 ZC2HC1BQ5TFG8 222 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 C2orf66Q6UXQ4 117 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 ORAOV1Q8WV07 137 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 IMMP2LQ96T52 175 aa9.02□□□□□ -0.97
HOXC9-202ENST00000504557 TGIF2-C20orf24A0A0A6YYL0 155 aa9.01□□□□□ -0.97
HOXC9-202ENST00000504557 A0A0J9YXV3 536 aa9.01□□□□□ -0.97
HOXC9-202ENST00000504557 TMEM141Q96I45 108 aa9.01□□□□□ -0.97
HOXC9-202ENST00000504557 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
HOXC9-202ENST00000504557 CYSLTR1Q9Y271 337 aa9.01□□□□□ -0.97
HOXC9-202ENST00000504557 PRSS47A8MTI9 375 aa9□□□□□ -0.97
HOXC9-202ENST00000504557 RPL18AQ02543 176 aaKnown RBP9□□□□□ -0.97
HOXC9-202ENST00000504557 TEX43Q6ZNM6 134 aa9□□□□□ -0.97
HOXC9-202ENST00000504557 C7orf33Q8WU49 177 aa9□□□□□ -0.97
HOXC9-202ENST00000504557 RPS10P5Q9NQ39 176 aa9□□□□□ -0.97
HOXC9-202ENST00000504557 LOC107984640A0A0U1RRK4 108 aa8.99□□□□□ -0.97
HOXC9-202ENST00000504557 ORMDL2Q53FV1 153 aa8.99□□□□□ -0.97
HOXC9-202ENST00000504557 Q6ZN92 141 aa8.99□□□□□ -0.97
HOXC9-202ENST00000504557 NXT2Q9NPJ8 142 aaKnown RBP8.99□□□□□ -0.97
HOXC9-202ENST00000504557 PKIGQ9Y2B9 76 aa8.99□□□□□ -0.97
HOXC9-202ENST00000504557 PYGO1Q9Y3Y4 419 aa8.99□□□□□ -0.97
HOXC9-202ENST00000504557 IGHV3OR16-9A0A0B4J2B5 98 aa8.98□□□□□ -0.97
HOXC9-202ENST00000504557 C2orf88Q9BSF0 95 aa8.98□□□□□ -0.97
HOXC9-202ENST00000504557 PKHD1L1Q86WI1 4243 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 TRAV9-1A0A075B6T8 112 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 KRTAP29-1A8MX34 341 aaPredicted RBP8.97□□□□□ -0.97
HOXC9-202ENST00000504557 PTTG1IPP53801 180 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 LINC00242Q5T6M2 205 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 OR10D4PQ8NGN7 298 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 C2orf48Q96LS8 159 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 VCX2Q9H322 139 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 LINC00474Q9P2X8 69 aa8.97□□□□□ -0.97
HOXC9-202ENST00000504557 HERC1Q15751 4861 aa8.96□□□□□ -0.97
HOXC9-202ENST00000504557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.95□□□□□ -0.98
HOXC9-202ENST00000504557 NDUFA1O15239 70 aa8.95□□□□□ -0.98
HOXC9-202ENST00000504557 UBE2D1P51668 147 aa8.95□□□□□ -0.98
HOXC9-202ENST00000504557 FABP9Q0Z7S8 132 aa8.95□□□□□ -0.98
HOXC9-202ENST00000504557 UNQ6190/PRO20217Q6UXQ8 127 aa8.95□□□□□ -0.98
HOXC9-202ENST00000504557 LINC00173Q6ZV60 143 aa8.95□□□□□ -0.98
HOXC9-202ENST00000504557 GNB1LQ9BYB4 327 aa8.95□□□□□ -0.98
HOXC9-202ENST00000504557 MRPL18Q9H0U6 180 aaKnown RBP8.95□□□□□ -0.98
HOXC9-202ENST00000504557 APOC3P02656 99 aa8.94□□□□□ -0.98
HOXC9-202ENST00000504557 RHEBQ15382 184 aa8.94□□□□□ -0.98
HOXC9-202ENST00000504557 C10orf91Q5T1B1 145 aa8.94□□□□□ -0.98
HOXC9-202ENST00000504557 C10orf25Q5T742 122 aa8.94□□□□□ -0.98
HOXC9-202ENST00000504557 CARHSP1Q9Y2V2 147 aaKnown RBP8.94□□□□□ -0.98
HOXC9-202ENST00000504557 A0A087WZ39 114 aa8.93□□□□□ -0.98
HOXC9-202ENST00000504557 IGIPA6NJ69 53 aa8.93□□□□□ -0.98
HOXC9-202ENST00000504557 K7EMI3 77 aa8.93□□□□□ -0.98
HOXC9-202ENST00000504557 ALKBH7Q9BT30 221 aaPredicted RBP8.93□□□□□ -0.98
HOXC9-202ENST00000504557 TOMM7Q9P0U1 55 aa8.93□□□□□ -0.98
HOXC9-202ENST00000504557 C2orf82Q6UX34 121 aa8.92□□□□□ -0.98
HOXC9-202ENST00000504557 TOMM6Q96B49 74 aa8.92□□□□□ -0.98
HOXC9-202ENST00000504557 SCGB3A1Q96QR1 104 aa8.92□□□□□ -0.98
HOXC9-202ENST00000504557 AMELXQ99217 191 aa8.92□□□□□ -0.98
HOXC9-202ENST00000504557 SMCO4Q9NRQ5 59 aa8.92□□□□□ -0.98
HOXC9-202ENST00000504557 A0A1W2PNN7 141 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 OXTP01178 125 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 G0S2P27469 103 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 PRR3P79522 188 aaKnown RBP8.91□□□□□ -0.98
HOXC9-202ENST00000504557 COX19Q49B96 90 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 C9orf116Q5BN46 136 aaPredicted RBP8.91□□□□□ -0.98
HOXC9-202ENST00000504557 FA2HQ7L5A8 372 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 MRPL35Q9NZE8 188 aaKnown RBP8.91□□□□□ -0.98
HOXC9-202ENST00000504557 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
HOXC9-202ENST00000504557 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.98
HOXC9-202ENST00000504557 MT-ND6P03923 174 aa8.9□□□□□ -0.98
HOXC9-202ENST00000504557 PRSS2P07478 247 aa8.9□□□□□ -0.98
HOXC9-202ENST00000504557 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.98
HOXC9-202ENST00000504557 GEMIN7Q9H840 131 aaKnown RBP8.9□□□□□ -0.98
HOXC9-202ENST00000504557 KIAA0087Q14695 138 aa8.89□□□□□ -0.99
HOXC9-202ENST00000504557 NDUFA5Q16718 116 aa8.89□□□□□ -0.99
HOXC9-202ENST00000504557 RNF151Q2KHN1 245 aa8.89□□□□□ -0.99
HOXC9-202ENST00000504557 PACRGQ96M98 296 aaPredicted RBP8.89□□□□□ -0.99
HOXC9-202ENST00000504557 TIMM17AQ99595 171 aa8.89□□□□□ -0.99
HOXC9-202ENST00000504557 TRAPPC1Q9Y5R8 145 aa8.89□□□□□ -0.99
HOXC9-202ENST00000504557 FAM168BA1KXE4 195 aa8.88□□□□□ -0.99
HOXC9-202ENST00000504557 Q6ZRP5 223 aa8.88□□□□□ -0.99
HOXC9-202ENST00000504557 PHF5AQ7RTV0 110 aaKnown RBP8.88□□□□□ -0.99
HOXC9-202ENST00000504557 ERASQ7Z444 233 aa8.88□□□□□ -0.99
HOXC9-202ENST00000504557 FAM19A5Q7Z5A7 132 aaPredicted RBP8.88□□□□□ -0.99
HOXC9-202ENST00000504557 CDKN2A-AS1Q9UH64 79 aa8.88□□□□□ -0.99
HOXC9-202ENST00000504557 F8WDY8 70 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 SNAPINO95295 136 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 NPSP0C0P6 89 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 CKS1BP61024 79 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 HERVK_113P63121 156 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 LINC00469Q8N7U9 141 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 FAT3Q8TDW7 4589 aa8.87□□□□□ -0.99
HOXC9-202ENST00000504557 C6orf226Q5I0X4 101 aa8.86□□□□□ -0.99
HOXC9-202ENST00000504557 SVBPQ8N300 66 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms