RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 C2orf88Q9BSF0 95 aa9.96□□□□□ -0.82
NUP50-219ENST00000497960 A0A096LNJ9 63 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 GAGE12HA6NDE8 117 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 IGIPA6NJ69 53 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 CCL25O15444 150 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BKO60814 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 SERF1AO75920 110 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BJP06899 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 NPSP0C0P6 89 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BOP23527 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BBP33778 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 XCL1P47992 114 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BDP58876 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BCP62807 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST2H2BEQ16778 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 PAPPA-AS1Q5QFB9 102 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.95□□□□□ -0.82
NUP50-219ENST00000497960 ERASQ7Z444 233 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BHQ93079 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 FAM104AQ969W3 186 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BNQ99877 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 HIST1H2BMQ99879 126 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 CHAC1Q9BUX1 264 aa9.95□□□□□ -0.82
NUP50-219ENST00000497960 hDV102S1A0JD36 115 aa9.94□□□□□ -0.82
NUP50-219ENST00000497960 C1orf196B1AJZ1 125 aa9.94□□□□□ -0.82
NUP50-219ENST00000497960 SCXQ7RTU7 201 aa9.94□□□□□ -0.82
NUP50-219ENST00000497960 FLG2Q5D862 2391 aaPredicted RBP9.93□□□□□ -0.82
NUP50-219ENST00000497960 PLA2G1BP04054 148 aaKnown RBP9.93□□□□□ -0.82
NUP50-219ENST00000497960 CFAP161Q6P656 301 aa9.93□□□□□ -0.82
NUP50-219ENST00000497960 LINC00528Q8N1L1 170 aa9.93□□□□□ -0.82
NUP50-219ENST00000497960 C9orf163Q8N9P6 203 aa9.93□□□□□ -0.82
NUP50-219ENST00000497960 VCX2Q9H322 139 aa9.93□□□□□ -0.82
NUP50-219ENST00000497960 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.92□□□□□ -0.82
NUP50-219ENST00000497960 LINC00310P59036 64 aa9.92□□□□□ -0.82
NUP50-219ENST00000497960 LINC00173Q6ZV60 143 aa9.92□□□□□ -0.82
NUP50-219ENST00000497960 PDZD11Q5EBL8 140 aa9.91□□□□□ -0.82
NUP50-219ENST00000497960 ZC2HC1BQ5TFG8 222 aa9.91□□□□□ -0.82
NUP50-219ENST00000497960 FAM19A2Q8N3H0 131 aa9.91□□□□□ -0.82
NUP50-219ENST00000497960 CIRBP-AS1Q8TBR5 109 aa9.91□□□□□ -0.82
NUP50-219ENST00000497960 AMELXQ99217 191 aa9.91□□□□□ -0.82
NUP50-219ENST00000497960 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.9□□□□□ -0.82
NUP50-219ENST00000497960 ATP5LO75964 103 aa9.9□□□□□ -0.82
NUP50-219ENST00000497960 CNBPP62633 177 aaKnown RBP9.9□□□□□ -0.82
NUP50-219ENST00000497960 FOXI1Q12951 378 aa9.9□□□□□ -0.82
NUP50-219ENST00000497960 CD164L2Q6UWJ8 174 aa9.9□□□□□ -0.82
NUP50-219ENST00000497960 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
NUP50-219ENST00000497960 UBE2D1P51668 147 aa9.89□□□□□ -0.83
NUP50-219ENST00000497960 NDUFA6P56556 154 aa9.88□□□□□ -0.83
NUP50-219ENST00000497960 PMVKQ15126 192 aa9.88□□□□□ -0.83
NUP50-219ENST00000497960 COX7A2LO14548 114 aa9.87□□□□□ -0.83
NUP50-219ENST00000497960 NUPR1O60356 82 aa9.87□□□□□ -0.83
NUP50-219ENST00000497960 MALP21145 153 aa9.87□□□□□ -0.83
NUP50-219ENST00000497960 SDIM1Q6ZPB5 146 aa9.87□□□□□ -0.83
NUP50-219ENST00000497960 DMBT1Q9UGM3 2413 aaPredicted RBP9.86□□□□□ -0.83
NUP50-219ENST00000497960 IGHV3-64A0A075B6Q5 118 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 LEPROTL1O95214 131 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 SEC11AP67812 179 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 LINC00242Q5T6M2 205 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 C15orf56Q8N910 161 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 IFI27L1Q96BM0 104 aa9.86□□□□□ -0.83
NUP50-219ENST00000497960 SRRM2Q9UQ35 2752 aaKnown RBP9.86□□□□□ -0.83
NUP50-219ENST00000497960 HIGD2BQ4VC39 106 aa9.85□□□□□ -0.83
NUP50-219ENST00000497960 CST9LQ9H4G1 147 aa9.85□□□□□ -0.83
NUP50-219ENST00000497960 GEMIN7Q9H840 131 aaKnown RBP9.85□□□□□ -0.83
NUP50-219ENST00000497960 IGHV1-58A0A0C4DH39 117 aa9.84□□□□□ -0.83
NUP50-219ENST00000497960 SLPIP03973 132 aa9.84□□□□□ -0.83
NUP50-219ENST00000497960 HERVK_113P63121 156 aa9.84□□□□□ -0.83
NUP50-219ENST00000497960 FAM19A3Q7Z5A8 133 aa9.84□□□□□ -0.83
NUP50-219ENST00000497960 HSPB8Q9UJY1 196 aa9.84□□□□□ -0.83
NUP50-219ENST00000497960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
NUP50-219ENST00000497960 IGHV3OR16-9A0A0B4J2B5 98 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 A0A0J9YXV3 536 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 H0Y8G0 127 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 APOMO95445 188 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 FABP4P15090 132 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 COX6A2Q02221 97 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
NUP50-219ENST00000497960 GVQW2A0A096LPI5 108 aaPredicted RBP9.82□□□□□ -0.84
NUP50-219ENST00000497960 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
NUP50-219ENST00000497960 LINC00469Q8N7U9 141 aa9.82□□□□□ -0.84
NUP50-219ENST00000497960 VPS13BQ7Z7G8 4022 aa9.81□□□□□ -0.84
NUP50-219ENST00000497960 TINCRA0A1B0GVN0 87 aa9.81□□□□□ -0.84
NUP50-219ENST00000497960 A0A087WZ39 114 aa9.8□□□□□ -0.84
NUP50-219ENST00000497960 TRAV12-1A0A0B4J245 112 aa9.8□□□□□ -0.84
NUP50-219ENST00000497960 PANO1I0J062 215 aa9.8□□□□□ -0.84
NUP50-219ENST00000497960 S100A6P06703 90 aa9.8□□□□□ -0.84
NUP50-219ENST00000497960 SPAG11BQ08648 103 aa9.8□□□□□ -0.84
NUP50-219ENST00000497960 ORAOV1Q8WV07 137 aa9.8□□□□□ -0.84
NUP50-219ENST00000497960 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
NUP50-219ENST00000497960 CHTOPQ9Y3Y2 248 aaKnown RBP9.8□□□□□ -0.84
NUP50-219ENST00000497960 ZNF561-AS1K7EIQ3 104 aa9.79□□□□□ -0.84
NUP50-219ENST00000497960 IGLC3P0DOY3 106 aa9.79□□□□□ -0.84
NUP50-219ENST00000497960 RPL37AP61513 92 aaKnown RBP9.79□□□□□ -0.84
NUP50-219ENST00000497960 CIRBPQ14011 172 aaKnown RBP9.79□□□□□ -0.84
NUP50-219ENST00000497960 OR10D4PQ8NGN7 298 aa9.79□□□□□ -0.84
NUP50-219ENST00000497960 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
NUP50-219ENST00000497960 MAP1LC3CQ9BXW4 147 aa9.78□□□□□ -0.84
NUP50-219ENST00000497960 CDKN2A-AS1Q9UH64 79 aa9.78□□□□□ -0.84
NUP50-219ENST00000497960 H3BRM9 83 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms