RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
VIM-208ENST00000497849 MAJINQ3KP22 176 aa10.22□□□□□ -0.77
VIM-208ENST00000497849 RNASEKQ6P5S7 137 aaKnown RBP10.22□□□□□ -0.77
VIM-208ENST00000497849 FA2HQ7L5A8 372 aa10.22□□□□□ -0.77
VIM-208ENST00000497849 LINC00614P0C842 121 aa10.21□□□□□ -0.77
VIM-208ENST00000497849 IFI27P40305 119 aaPredicted RBP10.21□□□□□ -0.77
VIM-208ENST00000497849 REG3AQ06141 175 aa10.21□□□□□ -0.77
VIM-208ENST00000497849 GAGE6Q13070 117 aa10.21□□□□□ -0.77
VIM-208ENST00000497849 Q8N8P6 123 aa10.21□□□□□ -0.77
VIM-208ENST00000497849 CHCHD1Q96BP2 118 aaKnown RBP10.21□□□□□ -0.77
VIM-208ENST00000497849 SMIM2Q9BVW6 85 aa10.21□□□□□ -0.77
VIM-208ENST00000497849 NXT2Q9NPJ8 142 aaKnown RBP10.21□□□□□ -0.77
VIM-208ENST00000497849 IGKV2-24A0A0C4DH68 120 aa10.2□□□□□ -0.78
VIM-208ENST00000497849 ESDP10768 282 aa10.2□□□□□ -0.78
VIM-208ENST00000497849 LINC00310P59036 64 aa10.2□□□□□ -0.78
VIM-208ENST00000497849 RPL32P62910 135 aaKnown RBP10.2□□□□□ -0.78
VIM-208ENST00000497849 STPG4Q8N801 248 aa10.2□□□□□ -0.78
VIM-208ENST00000497849 I3L3M4 83 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 VCYO14598 125 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 NUPR1O60356 82 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 HSBP1O75506 76 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 TSHBP01222 138 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 COTL1Q14019 142 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 HIST3H2BBQ8N257 126 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 URB1-AS1Q96HZ7 61 aa10.19□□□□□ -0.78
VIM-208ENST00000497849 IGHV1-24A0A0C4DH33 117 aa10.18□□□□□ -0.78
VIM-208ENST00000497849 S100A2P29034 98 aa10.18□□□□□ -0.78
VIM-208ENST00000497849 AMTP48728 403 aa10.18□□□□□ -0.78
VIM-208ENST00000497849 LCE2AQ5TA79 106 aaPredicted RBP10.18□□□□□ -0.78
VIM-208ENST00000497849 TRAV8-4A0A0B4J246 113 aa10.17□□□□□ -0.78
VIM-208ENST00000497849 TRBV27A0A0K0K1C4 114 aa10.17□□□□□ -0.78
VIM-208ENST00000497849 TMEM97Q5BJF2 176 aa10.17□□□□□ -0.78
VIM-208ENST00000497849 C20orf203Q8NBC4 194 aa10.17□□□□□ -0.78
VIM-208ENST00000497849 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
VIM-208ENST00000497849 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.16□□□□□ -0.78
VIM-208ENST00000497849 IGKV2-29A2NJV5 120 aaPredicted RBP10.16□□□□□ -0.78
VIM-208ENST00000497849 LINC01546A6NGU7 62 aa10.16□□□□□ -0.78
VIM-208ENST00000497849 TCAPO15273 167 aa10.16□□□□□ -0.78
VIM-208ENST00000497849 C15orf56Q8N910 161 aa10.16□□□□□ -0.78
VIM-208ENST00000497849 KIR2DL4Q99706 377 aa10.16□□□□□ -0.78
VIM-208ENST00000497849 TMEM243Q9BU79 118 aa10.16□□□□□ -0.78
VIM-208ENST00000497849 A0A0U1RQV1 116 aa10.15□□□□□ -0.78
VIM-208ENST00000497849 K7EMI3 77 aa10.15□□□□□ -0.78
VIM-208ENST00000497849 TMEM18Q96B42 140 aa10.15□□□□□ -0.78
VIM-208ENST00000497849 A0A096LNI7 61 aa10.14□□□□□ -0.79
VIM-208ENST00000497849 FCER1GP30273 86 aa10.14□□□□□ -0.79
VIM-208ENST00000497849 FAM19A2Q8N3H0 131 aa10.14□□□□□ -0.79
VIM-208ENST00000497849 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 IFITM10A6NMD0 228 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 FABP4P15090 132 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 PMCHL1Q16048 86 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 ORMDL2Q53FV1 153 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 Q6ZRP5 223 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 PACRGQ96M98 296 aaPredicted RBP10.13□□□□□ -0.79
VIM-208ENST00000497849 HIST1H2BLQ99880 126 aa10.13□□□□□ -0.79
VIM-208ENST00000497849 LOC105371267A0A1B0GV96 52 aa10.12□□□□□ -0.79
VIM-208ENST00000497849 UBE2L6O14933 153 aa10.11□□□□□ -0.79
VIM-208ENST00000497849 HBDP02042 147 aa10.11□□□□□ -0.79
VIM-208ENST00000497849 HIGD2BQ4VC39 106 aa10.11□□□□□ -0.79
VIM-208ENST00000497849 A0A1B0GUV1 79 aa10.1□□□□□ -0.79
VIM-208ENST00000497849 G0S2P27469 103 aa10.1□□□□□ -0.79
VIM-208ENST00000497849 A0A096LNJ9 63 aa10.09□□□□□ -0.79
VIM-208ENST00000497849 FGF6P10767 208 aa10.09□□□□□ -0.79
VIM-208ENST00000497849 RPL39P62891 51 aaKnown RBP10.09□□□□□ -0.79
VIM-208ENST00000497849 LEPROTL1O95214 131 aa10.08□□□□□ -0.8
VIM-208ENST00000497849 AMMECR1LQ6DCA0 310 aa10.08□□□□□ -0.8
VIM-208ENST00000497849 CFAP161Q6P656 301 aa10.08□□□□□ -0.8
VIM-208ENST00000497849 OR10D4PQ8NGN7 298 aa10.08□□□□□ -0.8
VIM-208ENST00000497849 HSPB8Q9UJY1 196 aa10.08□□□□□ -0.8
VIM-208ENST00000497849 GAGE12HA6NDE8 117 aa10.07□□□□□ -0.8
VIM-208ENST00000497849 AKR1D1P51857 326 aa10.07□□□□□ -0.8
VIM-208ENST00000497849 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
VIM-208ENST00000497849 LINC01549A6NIU2 74 aa10.06□□□□□ -0.8
VIM-208ENST00000497849 C2orf66Q6UXQ4 117 aa10.06□□□□□ -0.8
VIM-208ENST00000497849 ZNF664Q8N3J9 261 aa10.06□□□□□ -0.8
VIM-208ENST00000497849 TOMM6Q96B49 74 aa10.06□□□□□ -0.8
VIM-208ENST00000497849 PSORS1C2Q9UIG4 136 aa10.06□□□□□ -0.8
VIM-208ENST00000497849 GVQW2A0A096LPI5 108 aaPredicted RBP10.05□□□□□ -0.8
VIM-208ENST00000497849 IGKV3OR2-268A0A0C4DH90 116 aa10.05□□□□□ -0.8
VIM-208ENST00000497849 H7C423 109 aa10.05□□□□□ -0.8
VIM-208ENST00000497849 PRR26Q8N8Z3 221 aa10.05□□□□□ -0.8
VIM-208ENST00000497849 OPRPNQ99935 248 aaPredicted RBP10.05□□□□□ -0.8
VIM-208ENST00000497849 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
VIM-208ENST00000497849 ATP5LO75964 103 aa10.04□□□□□ -0.8
VIM-208ENST00000497849 RNASE13Q5GAN3 156 aaKnown RBP10.04□□□□□ -0.8
VIM-208ENST00000497849 LINC00173Q6ZV60 143 aa10.04□□□□□ -0.8
VIM-208ENST00000497849 SCGB3A1Q96QR1 104 aa10.04□□□□□ -0.8
VIM-208ENST00000497849 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
VIM-208ENST00000497849 KRTDAPP60985 99 aa10.03□□□□□ -0.8
VIM-208ENST00000497849 OR5A1Q8NGJ0 315 aa10.03□□□□□ -0.8
VIM-208ENST00000497849 TMEM101Q96IK0 257 aa10.03□□□□□ -0.8
VIM-208ENST00000497849 MAP1LC3CQ9BXW4 147 aa10.03□□□□□ -0.8
VIM-208ENST00000497849 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
VIM-208ENST00000497849 FAM104AQ969W3 186 aa10.02□□□□□ -0.81
VIM-208ENST00000497849 IFI27L1Q96BM0 104 aa10.02□□□□□ -0.81
VIM-208ENST00000497849 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
VIM-208ENST00000497849 C3orf79P0CE67 100 aa10.01□□□□□ -0.81
VIM-208ENST00000497849 Q6ZUT4 128 aa10.01□□□□□ -0.81
VIM-208ENST00000497849 ERASQ7Z444 233 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms