RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 UBE2D4Q9Y2X8 147 aa3.66□□□□□ -1.82
GGPS1-208ENST00000497327 IGLV4-3A0A075B6K6 122 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.65□□□□□ -1.83
GGPS1-208ENST00000497327 A0A087WX48 190 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 A0A096LPF7 62 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 TRBV6-8A0A0A6YYG3 113 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 A0A0J9YY99 117 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 IGKV2-29A2NJV5 120 aaPredicted RBP3.65□□□□□ -1.83
GGPS1-208ENST00000497327 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.65□□□□□ -1.83
GGPS1-208ENST00000497327 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
GGPS1-208ENST00000497327 TMEM97Q5BJF2 176 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 ZNF664Q8N3J9 261 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 C11orf45Q8TAV5 145 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 AMELXQ99217 191 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 OPRPNQ99935 248 aaPredicted RBP3.65□□□□□ -1.83
GGPS1-208ENST00000497327 CST9LQ9H4G1 147 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 SPANXA1Q9NS26 97 aa3.65□□□□□ -1.83
GGPS1-208ENST00000497327 CSDC2Q9Y534 153 aaKnown RBP3.65□□□□□ -1.83
GGPS1-208ENST00000497327 STAB2Q8WWQ8 2551 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 IGLV4-69A0A075B6H9 119 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 TRAV9-2A0A087WT02 112 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 C20orf202A1L168 122 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 H7C423 109 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 HTN3P15516 51 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 PMVKQ15126 192 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 MRPL23Q16540 153 aaKnown RBP3.64□□□□□ -1.83
GGPS1-208ENST00000497327 MAJINQ3KP22 176 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 LBHQ53QV2 105 aaPredicted RBP3.64□□□□□ -1.83
GGPS1-208ENST00000497327 CEMP1Q6PRD7 247 aaPredicted RBP3.64□□□□□ -1.83
GGPS1-208ENST00000497327 SH2D6Q7Z4S9 175 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 PMCHL2Q9BQD1 86 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 TMEM243Q9BU79 118 aa3.64□□□□□ -1.83
GGPS1-208ENST00000497327 MRPL35Q9NZE8 188 aaKnown RBP3.64□□□□□ -1.83
GGPS1-208ENST00000497327 TRBV25-1A0A075B6N4 114 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 DEFB131BA0A096LNP1 70 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 SMIM1B2RUZ4 78 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 F8VRH5 84 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 FGF6P10767 208 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 DEFA6Q01524 100 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 Q6ZN92 141 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 Q6ZUT4 128 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 ATOH7Q8N100 152 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 CDC42SE2Q9NRR3 84 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 ICOSQ9Y6W8 199 aa3.63□□□□□ -1.83
GGPS1-208ENST00000497327 TRAV10A0A0B4J240 114 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 H0Y8G0 127 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 DPM2O94777 84 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 IGKCP01834 107 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 IGLC3P0DOY3 106 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 ZNF25P17030 456 aaPredicted RBP3.62□□□□□ -1.83
GGPS1-208ENST00000497327 LELP1Q5T871 98 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 LYPD5Q6UWN5 251 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 FAM19A3Q7Z5A8 133 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 STPG4Q8N801 248 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 VCX2Q9H322 139 aa3.62□□□□□ -1.83
GGPS1-208ENST00000497327 CHTOPQ9Y3Y2 248 aaKnown RBP3.62□□□□□ -1.83
GGPS1-208ENST00000497327 IGLV4-60A0A075B6I1 120 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 C11orf86A6NJI1 115 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 PLNP26678 52 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 UBE2D1P51668 147 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 PKIAP61925 76 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 RBX1P62877 108 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 S100A12P80511 92 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 SMAGPQ0VAQ4 97 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 SPATA45Q537H7 98 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 OR5A1Q8NGJ0 315 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 CHCHD5Q9BSY4 110 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 VAMP8Q9BV40 100 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 MEGF8Q7Z7M0 2845 aa3.61□□□□□ -1.83
GGPS1-208ENST00000497327 IGKV2D-26A0A0A0MRZ7 120 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 A0A0J9YXV3 536 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 TINCRA0A1B0GVN0 87 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
GGPS1-208ENST00000497327 ESRGQ1W209 222 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 MPV17L2Q567V2 206 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 RNASE13Q5GAN3 156 aaKnown RBP3.6□□□□□ -1.83
GGPS1-208ENST00000497327 LINC00242Q5T6M2 205 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 AMMECR1LQ6DCA0 310 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 PRO1933Q9H354 126 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 PRKDCP78527 4128 aaKnown RBP3.6□□□□□ -1.83
GGPS1-208ENST00000497327 FBN3Q75N90 2809 aa3.6□□□□□ -1.83
GGPS1-208ENST00000497327 A0A087X002 238 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 TMEM223A0PJW6 202 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 UBE2L6O14933 153 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 COX6A2Q02221 97 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 C15orf53Q8NAA6 179 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 TMEM101Q96IK0 257 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 MIEN1Q9BRT3 115 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 C2orf88Q9BSF0 95 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 CHAC1Q9BUX1 264 aa3.59□□□□□ -1.83
GGPS1-208ENST00000497327 HSBP1L1C9JCN9 74 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 E9PLD3 99 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 TMEM262E9PQX1 116 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 DLEU1O43261 78 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 COX8AP10176 69 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 PCP2Q8IVA1 136 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 BOD1L2Q8IYS8 172 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 C14orf144Q96I85 54 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 PRR34Q9NV39 138 aa3.58□□□□□ -1.84
GGPS1-208ENST00000497327 APLNQ9ULZ1 77 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms