RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SHANK2Q9UPX8 1470 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 DNAJC13O75165 2243 aa-0.23□□□□□ -2.45
CD46-218ENST00000496723 SVEP1Q4LDE5 3571 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 TNFP01375 233 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 SPRR2DP22532 72 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 COMMD6Q7Z4G1 85 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 C5orf38Q86SI9 138 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 TSLPQ969D9 159 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 PKHD1P08F94 4074 aa-0.24□□□□□ -2.45
CD46-218ENST00000496723 HMGN4O00479 90 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 PRM1P04553 51 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 AKAIN1P0CW23 69 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 LINC00472Q9H8W2 130 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 LINC01558Q9Y6Z2 57 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 A2ML1A8K2U0 1454 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 WDR7Q9Y4E6 1490 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 ARHGEF12Q9NZN5 1544 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 EP300Q09472 2414 aaPredicted RBP-0.25□□□□□ -2.45
CD46-218ENST00000496723 LRP1BQ9NZR2 4599 aa-0.25□□□□□ -2.45
CD46-218ENST00000496723 ARHGEF5Q12774 1597 aa-0.26□□□□□ -2.45
CD46-218ENST00000496723 SFT2D2O95562 160 aa-0.26□□□□□ -2.45
CD46-218ENST00000496723 UQCR10Q9UDW1 63 aa-0.26□□□□□ -2.45
CD46-218ENST00000496723 SMG6Q86US8 1419 aaKnown RBP-0.27□□□□□ -2.45
CD46-218ENST00000496723 MRPL54Q6P161 138 aaKnown RBP-0.27□□□□□ -2.45
CD46-218ENST00000496723 LYSTQ99698 3801 aa-0.27□□□□□ -2.45
CD46-218ENST00000496723 FAIMQ9NVQ4 179 aa-0.27□□□□□ -2.45
CD46-218ENST00000496723 LAMA5O15230 3695 aa-0.27□□□□□ -2.45
CD46-218ENST00000496723 NBASA2RRP1 2371 aa-0.27□□□□□ -2.45
CD46-218ENST00000496723 SETD2Q9BYW2 2564 aaPredicted RBP-0.28□□□□□ -2.45
CD46-218ENST00000496723 MXRA5Q9NR99 2828 aa-0.28□□□□□ -2.45
CD46-218ENST00000496723 LOC100130705A0A1B0GUX0 176 aa-0.28□□□□□ -2.45
CD46-218ENST00000496723 MGPP08493 103 aa-0.28□□□□□ -2.45
CD46-218ENST00000496723 COX6B1P14854 86 aa-0.28□□□□□ -2.45
CD46-218ENST00000496723 PP6455Q8WZ26 134 aa-0.28□□□□□ -2.45
CD46-218ENST00000496723 NUP188Q5SRE5 1749 aa-0.28□□□□□ -2.45
CD46-218ENST00000496723 EIF4G3O43432 1585 aaKnown RBP-0.28□□□□□ -2.45
CD46-218ENST00000496723 ANKRD36A6QL64 1941 aa-0.28□□□□□ -2.46
CD46-218ENST00000496723 POLA1P09884 1462 aaPredicted RBP-0.29□□□□□ -2.46
CD46-218ENST00000496723 EPG5Q9HCE0 2579 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 SCN7AQ01118 1682 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 UBE2L5PA0A1B0GUS4 154 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 CHKB-CPT1BH3BT56 60 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 ATP5EP56381 51 aaPredicted RBP-0.29□□□□□ -2.46
CD46-218ENST00000496723 UBE2L3P68036 154 aaKnown RBP-0.29□□□□□ -2.46
CD46-218ENST00000496723 KRTAP19-7Q3SYF9 63 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 C9orf153Q5TBE3 101 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 NXT2Q9NPJ8 142 aaKnown RBP-0.29□□□□□ -2.46
CD46-218ENST00000496723 MYOM2P54296 1465 aa-0.29□□□□□ -2.46
CD46-218ENST00000496723 AKAP9Q99996 3911 aa-0.3□□□□□ -2.46
CD46-218ENST00000496723 ROCK2O75116 1388 aaKnown RBP-0.3□□□□□ -2.46
CD46-218ENST00000496723 PRRC2CQ9Y520 2896 aaKnown RBP-0.3□□□□□ -2.46
CD46-218ENST00000496723 K7EQZ3 153 aa-0.3□□□□□ -2.46
CD46-218ENST00000496723 WHAMMP3Q1A5X7 153 aa-0.3□□□□□ -2.46
CD46-218ENST00000496723 HERC1Q15751 4861 aa-0.3□□□□□ -2.46
CD46-218ENST00000496723 GAPVD1Q14C86 1478 aa-0.3□□□□□ -2.46
CD46-218ENST00000496723 KMT2CQ8NEZ4 4911 aaKnown RBP-0.3□□□□□ -2.46
CD46-218ENST00000496723 EHBP1L1Q8N3D4 1523 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 OOSP1A8MZH6 123 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 SNAPC5O75971 98 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 RPL13AP3Q6NVV1 102 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 TMEM263Q8WUH6 116 aaKnown RBP-0.31□□□□□ -2.46
CD46-218ENST00000496723 KNL1Q8NG31 2342 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 PDCD11Q14690 1871 aaKnown RBP-0.31□□□□□ -2.46
CD46-218ENST00000496723 TOP2BQ02880 1626 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 REV3LO60673 3130 aa-0.31□□□□□ -2.46
CD46-218ENST00000496723 NRKQ7Z2Y5 1582 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 ZZEF1O43149 2961 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 MAGI1Q96QZ7 1491 aaPredicted RBP-0.32□□□□□ -2.46
CD46-218ENST00000496723 FAM24AA6NFZ4 105 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 SPRR1BP22528 89 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 DEFB123Q8N688 67 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 LINC00474Q9P2X8 69 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 DNAH6Q9C0G6 4158 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 CREBBPQ92793 2442 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 NSD3Q9BZ95 1437 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 DIP2CQ9Y2E4 1556 aa-0.32□□□□□ -2.46
CD46-218ENST00000496723 FAT1Q14517 4588 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 PKD1P98161 4303 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 ITPR3Q14573 2671 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 PCNX1Q96RV3 2341 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 TRBV7-4A0A0J9YYF1 115 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 F6UZH7 168 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 IGLC1P0CG04 106 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 GNG11P61952 73 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 UBA52P62987 128 aaKnown RBP-0.33□□□□□ -2.46
CD46-218ENST00000496723 CDC42SE2Q9NRR3 84 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 SPG11Q96JI7 2443 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 USP9YO00507 2555 aaPredicted RBP-0.33□□□□□ -2.46
CD46-218ENST00000496723 HMGXB3Q12766 1538 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 TULP4Q9NRJ4 1543 aa-0.33□□□□□ -2.46
CD46-218ENST00000496723 HIVEP1P15822 2718 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 DNAH3Q8TD57 4116 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 KIAA0556O60303 1618 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.34□□□□□ -2.46
CD46-218ENST00000496723 A0A0G2JMZ2 1700 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 EFCAB10A6NFE3 127 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 LOC730098B7Z3J9 87 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 TACC2O95359 2948 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 C10orf113Q5VZT2 155 aa-0.34□□□□□ -2.46
CD46-218ENST00000496723 FAM223AQ8IWN6 122 aa-0.34□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms