RNA–Protein interactions for RNA: ENST00000495663.1

RAB11FIP3-211, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-211ENST00000495663 HIST1H2BJP06899 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 NPSP0C0P6 89 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BOP23527 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BBP33778 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BDP58876 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BCP62807 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST2H2BEQ16778 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 Q6ZN92 141 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 LINC00336Q6ZUF6 198 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 ERASQ7Z444 233 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BHQ93079 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 TMEM141Q96I45 108 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 SCGB3A1Q96QR1 104 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 TIMM17AQ99595 171 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BNQ99877 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 HIST1H2BMQ99879 126 aa6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 TMA7Q9Y2S6 64 aaKnown RBP6.73□□□□□ -1.33
RAB11FIP3-211ENST00000495663 IGLV10-54A0A075B6I4 117 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 LINC00959A0A1B0GUT2 108 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 IGIPA6NJ69 53 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 SS18Q15532 418 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 PMCHL1Q16048 86 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 PAPPA-AS1Q5QFB9 102 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 TEX43Q6ZNM6 134 aa6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 OPRPNQ99935 248 aaPredicted RBP6.72□□□□□ -1.33
RAB11FIP3-211ENST00000495663 DNAH2Q9P225 4427 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 A0A096LNJ9 63 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 IFITM10A6NMD0 228 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 CCL25O15444 150 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 SERF1AO75920 110 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 FAM104AQ969W3 186 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 VCX2Q9H322 139 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 FRAS1Q86XX4 4008 aa6.71□□□□□ -1.34
RAB11FIP3-211ENST00000495663 TRAV13-1A0A0B4J241 112 aa6.7□□□□□ -1.34
RAB11FIP3-211ENST00000495663 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.7□□□□□ -1.34
RAB11FIP3-211ENST00000495663 CHCHD10Q8WYQ3 142 aaPredicted RBP6.7□□□□□ -1.34
RAB11FIP3-211ENST00000495663 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
RAB11FIP3-211ENST00000495663 TRIAP1O43715 76 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 ATP5LO75964 103 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 XCL1P47992 114 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 KRTAP26-1Q6PEX3 210 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 FAM19A2Q8N3H0 131 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 AMELXQ99217 191 aa6.69□□□□□ -1.34
RAB11FIP3-211ENST00000495663 DNAH10Q8IVF4 4471 aa6.68□□□□□ -1.34
RAB11FIP3-211ENST00000495663 LINC00173Q6ZV60 143 aa6.68□□□□□ -1.34
RAB11FIP3-211ENST00000495663 MAPKAPK5-AS1Q8N8E1 139 aa6.68□□□□□ -1.34
RAB11FIP3-211ENST00000495663 A0A087WTM6 91 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 LRCOL1A6NCL2 159 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 NUPR1O60356 82 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 MALP21145 153 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 UBE2D1P51668 147 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 NDUFA6P56556 154 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 PMVKQ15126 192 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 CD164L2Q6UWJ8 174 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 BAALCQ8WXS3 180 aa6.67□□□□□ -1.34
RAB11FIP3-211ENST00000495663 LECT2O14960 151 aa6.66□□□□□ -1.34
RAB11FIP3-211ENST00000495663 LEPROTL1O95214 131 aa6.66□□□□□ -1.34
RAB11FIP3-211ENST00000495663 SEC11AP67812 179 aa6.66□□□□□ -1.34
RAB11FIP3-211ENST00000495663 COA6Q5JTJ3 125 aaKnown RBP6.66□□□□□ -1.34
RAB11FIP3-211ENST00000495663 IFI27L1Q96BM0 104 aa6.66□□□□□ -1.34
RAB11FIP3-211ENST00000495663 DNAH17Q9UFH2 4485 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 PRSS1P07477 247 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 C14orf177Q52M58 125 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 CST9LQ9H4G1 147 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 HSPB8Q9UJY1 196 aa6.65□□□□□ -1.34
RAB11FIP3-211ENST00000495663 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 COX7A2LO14548 114 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 IGKV2-30P06310 120 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 FABP4P15090 132 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 HERVK_113P63121 156 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 WFDC2Q14508 124 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 CFAP161Q6P656 301 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 Q8N814 137 aa6.64□□□□□ -1.35
RAB11FIP3-211ENST00000495663 IGHV3OR16-9A0A0B4J2B5 98 aa6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 A0A0J9YXV3 536 aa6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 A0A1B0GVY2 172 aa6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 S100A6P06703 90 aa6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 COX6A2Q02221 97 aa6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 C5orf38Q86SI9 138 aa6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 PACRGQ96M98 296 aaPredicted RBP6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 GEMIN7Q9H840 131 aaKnown RBP6.63□□□□□ -1.35
RAB11FIP3-211ENST00000495663 FAT2Q9NYQ8 4349 aa6.62□□□□□ -1.35
RAB11FIP3-211ENST00000495663 TRAV12-1A0A0B4J245 112 aa6.62□□□□□ -1.35
RAB11FIP3-211ENST00000495663 IGHV1-58A0A0C4DH39 117 aa6.62□□□□□ -1.35
RAB11FIP3-211ENST00000495663 TINCRA0A1B0GVN0 87 aa6.62□□□□□ -1.35
RAB11FIP3-211ENST00000495663 APOMO95445 188 aa6.62□□□□□ -1.35
RAB11FIP3-211ENST00000495663 C15orf56Q8N910 161 aa6.62□□□□□ -1.35
RAB11FIP3-211ENST00000495663 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.61□□□□□ -1.35
RAB11FIP3-211ENST00000495663 A0A087WZ39 114 aa6.61□□□□□ -1.35
RAB11FIP3-211ENST00000495663 hDV102S1A0JD36 115 aa6.61□□□□□ -1.35
RAB11FIP3-211ENST00000495663 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
RAB11FIP3-211ENST00000495663 MAP1LC3CQ9BXW4 147 aa6.61□□□□□ -1.35
RAB11FIP3-211ENST00000495663 CHTOPQ9Y3Y2 248 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms