RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MRPS36P82909 103 aaKnown RBP7.86□□□□□ -1.15
HSPG2-212ENST00000493940 C10orf25Q5T742 122 aa7.86□□□□□ -1.15
HSPG2-212ENST00000493940 COMMD7Q86VX2 200 aa7.86□□□□□ -1.15
HSPG2-212ENST00000493940 TMEM18Q96B42 140 aa7.86□□□□□ -1.15
HSPG2-212ENST00000493940 SPANXA1Q9NS26 97 aa7.86□□□□□ -1.15
HSPG2-212ENST00000493940 IGLV4-3A0A075B6K6 122 aa7.85□□□□□ -1.15
HSPG2-212ENST00000493940 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.85□□□□□ -1.15
HSPG2-212ENST00000493940 MALP21145 153 aa7.85□□□□□ -1.15
HSPG2-212ENST00000493940 TMEM218A2RU14 115 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 PTTG1IPP53801 180 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 GAGE2BQ13066 116 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 KIAA1644Q3SXP7 199 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 LINC00242Q5T6M2 205 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 LINC00173Q6ZV60 143 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 CAMK2N2Q96S95 79 aa7.84□□□□□ -1.15
HSPG2-212ENST00000493940 IFITM10A6NMD0 228 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 PRR3P79522 188 aaKnown RBP7.83□□□□□ -1.16
HSPG2-212ENST00000493940 SPAG11BQ08648 103 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 SMAGPQ0VAQ4 97 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 KIAA0087Q14695 138 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 ODF1Q14990 250 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 UQCC3Q6UW78 93 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 Q8N8P6 123 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 C2orf48Q96LS8 159 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 PYGO1Q9Y3Y4 419 aa7.83□□□□□ -1.16
HSPG2-212ENST00000493940 LOC107984640A0A0U1RRK4 108 aa7.82□□□□□ -1.16
HSPG2-212ENST00000493940 RAB5AP20339 215 aa7.82□□□□□ -1.16
HSPG2-212ENST00000493940 UNQ6190/PRO20217Q6UXQ8 127 aa7.82□□□□□ -1.16
HSPG2-212ENST00000493940 ORAOV1Q8WV07 137 aa7.82□□□□□ -1.16
HSPG2-212ENST00000493940 MAP1LC3AQ9H492 121 aa7.82□□□□□ -1.16
HSPG2-212ENST00000493940 APOMO95445 188 aa7.81□□□□□ -1.16
HSPG2-212ENST00000493940 IFI27P40305 119 aaPredicted RBP7.81□□□□□ -1.16
HSPG2-212ENST00000493940 C2orf66Q6UXQ4 117 aa7.81□□□□□ -1.16
HSPG2-212ENST00000493940 IMMP2LQ96T52 175 aa7.81□□□□□ -1.16
HSPG2-212ENST00000493940 IGIPA6NJ69 53 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 UBE2D1P51668 147 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 SRSF9Q13242 221 aaKnown RBP eCLIP7.8□□□□□ -1.16
HSPG2-212ENST00000493940 C9orf116Q5BN46 136 aaPredicted RBP7.8□□□□□ -1.16
HSPG2-212ENST00000493940 KRTAP11-1Q8IUC1 163 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 KRTAP7-1Q8IUC3 87 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 OR10D4PQ8NGN7 298 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 C7orf33Q8WU49 177 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 TMEM141Q96I45 108 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 AMELXQ99217 191 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 LAMTOR2Q9Y2Q5 125 aa7.8□□□□□ -1.16
HSPG2-212ENST00000493940 A0A087WZ39 114 aa7.79□□□□□ -1.16
HSPG2-212ENST00000493940 FAM168BA1KXE4 195 aa7.79□□□□□ -1.16
HSPG2-212ENST00000493940 RNF151Q2KHN1 245 aa7.79□□□□□ -1.16
HSPG2-212ENST00000493940 LINC00474Q9P2X8 69 aa7.79□□□□□ -1.16
HSPG2-212ENST00000493940 RPL18AQ02543 176 aaKnown RBP7.78□□□□□ -1.16
HSPG2-212ENST00000493940 NDUFA5Q16718 116 aa7.78□□□□□ -1.16
HSPG2-212ENST00000493940 C2orf82Q6UX34 121 aa7.78□□□□□ -1.16
HSPG2-212ENST00000493940 Q6ZRP5 223 aa7.78□□□□□ -1.16
HSPG2-212ENST00000493940 PHF5AQ7RTV0 110 aaKnown RBP7.78□□□□□ -1.16
HSPG2-212ENST00000493940 SEC11CQ9BY50 192 aa7.78□□□□□ -1.16
HSPG2-212ENST00000493940 CTDSP1Q9GZU7 261 aa7.78□□□□□ -1.16
HSPG2-212ENST00000493940 MRPL35Q9NZE8 188 aaKnown RBP7.78□□□□□ -1.16
HSPG2-212ENST00000493940 C10orf91Q5T1B1 145 aa7.77□□□□□ -1.17
HSPG2-212ENST00000493940 CYSLTR1Q9Y271 337 aa7.77□□□□□ -1.17
HSPG2-212ENST00000493940 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
HSPG2-212ENST00000493940 NDUFA1O15239 70 aa7.75□□□□□ -1.17
HSPG2-212ENST00000493940 ORMDL2Q53FV1 153 aa7.75□□□□□ -1.17
HSPG2-212ENST00000493940 FAM19A3Q7Z5A8 133 aa7.75□□□□□ -1.17
HSPG2-212ENST00000493940 LINC01600Q96MT4 127 aa7.75□□□□□ -1.17
HSPG2-212ENST00000493940 ALKBH7Q9BT30 221 aaPredicted RBP7.75□□□□□ -1.17
HSPG2-212ENST00000493940 NXT2Q9NPJ8 142 aaKnown RBP7.75□□□□□ -1.17
HSPG2-212ENST00000493940 PSORS1C2Q9UIG4 136 aa7.75□□□□□ -1.17
HSPG2-212ENST00000493940 TGIF2-C20orf24A0A0A6YYL0 155 aa7.74□□□□□ -1.17
HSPG2-212ENST00000493940 TLX1NBP0CAT3 122 aa7.74□□□□□ -1.17
HSPG2-212ENST00000493940 SLC7A5P1Q8MH63 180 aa7.74□□□□□ -1.17
HSPG2-212ENST00000493940 TOMM6Q96B49 74 aa7.74□□□□□ -1.17
HSPG2-212ENST00000493940 VCX2Q9H322 139 aa7.74□□□□□ -1.17
HSPG2-212ENST00000493940 TRAV9-1A0A075B6T8 112 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 KRTAP10-8P60410 259 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 GAGE2EQ4V326 116 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 GNB1LQ9BYB4 327 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 GAGE2DQ9UEU5 116 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 CDKN2A-AS1Q9UH64 79 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
HSPG2-212ENST00000493940 LINC01546A6NGU7 62 aa7.72□□□□□ -1.17
HSPG2-212ENST00000493940 F8WDY8 70 aa7.72□□□□□ -1.17
HSPG2-212ENST00000493940 K7EMI3 77 aa7.72□□□□□ -1.17
HSPG2-212ENST00000493940 C9orf129Q5T035 196 aaKnown RBP7.72□□□□□ -1.17
HSPG2-212ENST00000493940 SPINK6Q6UWN8 80 aa7.72□□□□□ -1.17
HSPG2-212ENST00000493940 URB1-AS1Q96HZ7 61 aa7.72□□□□□ -1.17
HSPG2-212ENST00000493940 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
HSPG2-212ENST00000493940 LRP2P98164 4655 aa7.71□□□□□ -1.18
HSPG2-212ENST00000493940 LINC01561Q8N1V8 128 aa7.71□□□□□ -1.18
HSPG2-212ENST00000493940 TIMM17AQ99595 171 aa7.71□□□□□ -1.18
HSPG2-212ENST00000493940 NPSP0C0P6 89 aa7.7□□□□□ -1.18
HSPG2-212ENST00000493940 Q6ZN92 141 aa7.7□□□□□ -1.18
HSPG2-212ENST00000493940 ERASQ7Z444 233 aa7.7□□□□□ -1.18
HSPG2-212ENST00000493940 FAM19A5Q7Z5A7 132 aaPredicted RBP7.7□□□□□ -1.18
HSPG2-212ENST00000493940 C2orf88Q9BSF0 95 aa7.7□□□□□ -1.18
HSPG2-212ENST00000493940 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
HSPG2-212ENST00000493940 RPS10P5Q9NQ39 176 aa7.7□□□□□ -1.18
HSPG2-212ENST00000493940 TOMM7Q9P0U1 55 aa7.7□□□□□ -1.18
HSPG2-212ENST00000493940 A0A096LNJ9 63 aa7.69□□□□□ -1.18
HSPG2-212ENST00000493940 TRBV30A0A0K0K1B3 111 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms