RNA–Protein interactions for RNA: ENST00000493610.2

PDCD11-206, Transcript of programmed cell death 11, humanhuman

TSL 5

Gene PDCD11, Length 732 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-206ENST00000493610 LINC01546A6NGU7 62 aa8.6□□□□□ -1.03
PDCD11-206ENST00000493610 LINC00242Q5T6M2 205 aa8.6□□□□□ -1.03
PDCD11-206ENST00000493610 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
PDCD11-206ENST00000493610 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
PDCD11-206ENST00000493610 AMELXQ99217 191 aa8.6□□□□□ -1.03
PDCD11-206ENST00000493610 GNB1LQ9BYB4 327 aa8.6□□□□□ -1.03
PDCD11-206ENST00000493610 LRP1Q07954 4544 aaKnown RBP8.59□□□□□ -1.03
PDCD11-206ENST00000493610 IFITM10A6NMD0 228 aa8.59□□□□□ -1.03
PDCD11-206ENST00000493610 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
PDCD11-206ENST00000493610 RHEBQ15382 184 aa8.59□□□□□ -1.03
PDCD11-206ENST00000493610 ALKBH7Q9BT30 221 aaPredicted RBP8.59□□□□□ -1.03
PDCD11-206ENST00000493610 IGKV2-24A0A0C4DH68 120 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 UBE2D1P51668 147 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 RPL37AP61513 92 aaKnown RBP8.58□□□□□ -1.04
PDCD11-206ENST00000493610 KIAA0087Q14695 138 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 TMEM141Q96I45 108 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 C2orf48Q96LS8 159 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 NXT2Q9NPJ8 142 aaKnown RBP8.58□□□□□ -1.04
PDCD11-206ENST00000493610 RPS10P5Q9NQ39 176 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 CYSLTR1Q9Y271 337 aa8.58□□□□□ -1.04
PDCD11-206ENST00000493610 HERC1Q15751 4861 aa8.57□□□□□ -1.04
PDCD11-206ENST00000493610 ZNF561-AS1K7EIQ3 104 aa8.57□□□□□ -1.04
PDCD11-206ENST00000493610 K7EMI3 77 aa8.57□□□□□ -1.04
PDCD11-206ENST00000493610 MALP21145 153 aa8.57□□□□□ -1.04
PDCD11-206ENST00000493610 C10orf25Q5T742 122 aa8.57□□□□□ -1.04
PDCD11-206ENST00000493610 A0A087WZ39 114 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 KRTAP29-1A8MX34 341 aaPredicted RBP8.56□□□□□ -1.04
PDCD11-206ENST00000493610 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.56□□□□□ -1.04
PDCD11-206ENST00000493610 SPAG11BQ08648 103 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 ORMDL2Q53FV1 153 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 FAM19A3Q7Z5A8 133 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 URB1-AS1Q96HZ7 61 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 YPEL4Q96NS1 127 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 FAT3Q8TDW7 4589 aa8.56□□□□□ -1.04
PDCD11-206ENST00000493610 A0A0J9YXV3 536 aa8.55□□□□□ -1.04
PDCD11-206ENST00000493610 S100PP25815 95 aa8.55□□□□□ -1.04
PDCD11-206ENST00000493610 STPG4Q8N801 248 aa8.55□□□□□ -1.04
PDCD11-206ENST00000493610 OR10D4PQ8NGN7 298 aa8.55□□□□□ -1.04
PDCD11-206ENST00000493610 ORAOV1Q8WV07 137 aa8.55□□□□□ -1.04
PDCD11-206ENST00000493610 MRPL18Q9H0U6 180 aaKnown RBP8.55□□□□□ -1.04
PDCD11-206ENST00000493610 DMBT1Q9UGM3 2413 aaPredicted RBP8.55□□□□□ -1.04
PDCD11-206ENST00000493610 NPSP0C0P6 89 aa8.54□□□□□ -1.04
PDCD11-206ENST00000493610 PTTG1IPP53801 180 aa8.54□□□□□ -1.04
PDCD11-206ENST00000493610 CAMK2N2Q96S95 79 aa8.54□□□□□ -1.04
PDCD11-206ENST00000493610 A0A096LNJ9 63 aa8.53□□□□□ -1.04
PDCD11-206ENST00000493610 A0A1W2PNN7 141 aa8.53□□□□□ -1.04
PDCD11-206ENST00000493610 APOMO95445 188 aa8.53□□□□□ -1.04
PDCD11-206ENST00000493610 APOC3P02656 99 aa8.53□□□□□ -1.04
PDCD11-206ENST00000493610 TEX43Q6ZNM6 134 aa8.53□□□□□ -1.04
PDCD11-206ENST00000493610 TIMM17AQ99595 171 aa8.53□□□□□ -1.04
PDCD11-206ENST00000493610 MT-ND6P03923 174 aa8.52□□□□□ -1.05
PDCD11-206ENST00000493610 RNF151Q2KHN1 245 aa8.52□□□□□ -1.05
PDCD11-206ENST00000493610 COX19Q49B96 90 aa8.52□□□□□ -1.05
PDCD11-206ENST00000493610 UNQ6190/PRO20217Q6UXQ8 127 aa8.52□□□□□ -1.05
PDCD11-206ENST00000493610 DPH3Q96FX2 82 aa8.52□□□□□ -1.05
PDCD11-206ENST00000493610 MRPL35Q9NZE8 188 aaKnown RBP8.52□□□□□ -1.05
PDCD11-206ENST00000493610 C6orf48Q9UBA6 75 aa8.52□□□□□ -1.05
PDCD11-206ENST00000493610 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
PDCD11-206ENST00000493610 FABP9Q0Z7S8 132 aa8.51□□□□□ -1.05
PDCD11-206ENST00000493610 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
PDCD11-206ENST00000493610 VCX2Q9H322 139 aa8.51□□□□□ -1.05
PDCD11-206ENST00000493610 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
PDCD11-206ENST00000493610 ERASQ7Z444 233 aa8.5□□□□□ -1.05
PDCD11-206ENST00000493610 KRTAP7-1Q8IUC3 87 aa8.5□□□□□ -1.05
PDCD11-206ENST00000493610 C18orf32Q8TCD1 76 aa8.5□□□□□ -1.05
PDCD11-206ENST00000493610 F8WDY8 70 aa8.49□□□□□ -1.05
PDCD11-206ENST00000493610 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
PDCD11-206ENST00000493610 SVBPQ8N300 66 aa8.49□□□□□ -1.05
PDCD11-206ENST00000493610 LINC00474Q9P2X8 69 aa8.49□□□□□ -1.05
PDCD11-206ENST00000493610 SNAPINO95295 136 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 TLX1NBP0CAT3 122 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 PRR3P79522 188 aaKnown RBP8.48□□□□□ -1.05
PDCD11-206ENST00000493610 Q6ZN92 141 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 Q6ZRP5 223 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 SCGB3A1Q96QR1 104 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 C2orf88Q9BSF0 95 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 CDKN2A-AS1Q9UH64 79 aa8.48□□□□□ -1.05
PDCD11-206ENST00000493610 NDUFA1O15239 70 aa8.47□□□□□ -1.05
PDCD11-206ENST00000493610 MT1HL1P0DM35 61 aa8.47□□□□□ -1.05
PDCD11-206ENST00000493610 TRAPPC1Q9Y5R8 145 aa8.47□□□□□ -1.05
PDCD11-206ENST00000493610 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
PDCD11-206ENST00000493610 OXTP01178 125 aa8.46□□□□□ -1.06
PDCD11-206ENST00000493610 G0S2P27469 103 aa8.46□□□□□ -1.06
PDCD11-206ENST00000493610 RPL18AQ02543 176 aaKnown RBP8.46□□□□□ -1.06
PDCD11-206ENST00000493610 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.06
PDCD11-206ENST00000493610 KRTAP11-1Q8IUC1 163 aa8.46□□□□□ -1.06
PDCD11-206ENST00000493610 CST9LQ9H4G1 147 aa8.46□□□□□ -1.06
PDCD11-206ENST00000493610 PKIGQ9Y2B9 76 aa8.46□□□□□ -1.06
PDCD11-206ENST00000493610 FAM168BA1KXE4 195 aa8.45□□□□□ -1.06
PDCD11-206ENST00000493610 FA2HQ7L5A8 372 aa8.45□□□□□ -1.06
PDCD11-206ENST00000493610 SLC7A5P1Q8MH63 180 aa8.45□□□□□ -1.06
PDCD11-206ENST00000493610 SMIM1B2RUZ4 78 aa8.44□□□□□ -1.06
PDCD11-206ENST00000493610 J3QL48 77 aa8.44□□□□□ -1.06
PDCD11-206ENST00000493610 HERVK_113P63121 156 aa8.44□□□□□ -1.06
PDCD11-206ENST00000493610 C7orf33Q8WU49 177 aa8.44□□□□□ -1.06
PDCD11-206ENST00000493610 TRBV30A0A0K0K1B3 111 aa8.43□□□□□ -1.06
PDCD11-206ENST00000493610 TINCRA0A1B0GVN0 87 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms