RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
EWSR1-220ENST00000493426 PROK1P58294 105 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 SS18Q15532 418 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 ZNF843Q8N446 348 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 SND1-IT1Q9HBX3 110 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 C14orf132Q9NPU4 83 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 CDC42SE2Q9NRR3 84 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 ORMDL1Q9P0S3 153 aa4.8□□□□□ -1.64
EWSR1-220ENST00000493426 RP1L1Q8IWN7 2480 aaPredicted RBP4.8□□□□□ -1.64
EWSR1-220ENST00000493426 A0A087WYN8 130 aa4.79□□□□□ -1.64
EWSR1-220ENST00000493426 H3BQ85 93 aa4.79□□□□□ -1.64
EWSR1-220ENST00000493426 LY6HO94772 140 aa4.79□□□□□ -1.64
EWSR1-220ENST00000493426 SPINK13Q1W4C9 94 aa4.79□□□□□ -1.64
EWSR1-220ENST00000493426 RNASE13Q5GAN3 156 aaKnown RBP4.79□□□□□ -1.64
EWSR1-220ENST00000493426 C9orf129Q5T035 196 aaKnown RBP4.79□□□□□ -1.64
EWSR1-220ENST00000493426 TMEM243Q9BU79 118 aa4.79□□□□□ -1.64
EWSR1-220ENST00000493426 LRRK2Q5S007 2527 aa4.79□□□□□ -1.64
EWSR1-220ENST00000493426 NACAE9PAV3 2078 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 A0A087WVE0 104 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 TRBV6-4A0A1B0GX49 114 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 K7EQD1 137 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 TMEM256-PLSCR3K7ERE1 68 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 IGHV4-38-2P0DP08 117 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 ADORA2A-AS1P86434 159 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 MIR7-3HGQ8N6C7 128 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 C11orf72Q8NBR9 251 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 C16orf95Q9H693 158 aa4.78□□□□□ -1.64
EWSR1-220ENST00000493426 PTPN13Q12923 2485 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 IGKV3-7A0A075B6H7 116 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 LOC110117498A0A087WWA1 95 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 KNCNA6PVL3 124 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 ERC2-IT1O76042 136 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 IGHV3-11P01762 117 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 PLA2G2AP14555 144 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 PDE6GP18545 87 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 CCL18P55774 89 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 C11orf44Q8N8P7 122 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 COX7B2Q8TF08 81 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 Q96MF0 132 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 UBL5Q9BZL1 73 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 Q9UF83 564 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 PCNX1Q96RV3 2341 aa4.77□□□□□ -1.65
EWSR1-220ENST00000493426 J3QLI3 93 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 LECT2O14960 151 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 HOXD3P31249 432 aaPredicted RBP4.76□□□□□ -1.65
EWSR1-220ENST00000493426 RPL36AP83881 106 aaKnown RBP4.76□□□□□ -1.65
EWSR1-220ENST00000493426 LINC00336Q6ZUF6 198 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 LINC00482Q8N8I6 264 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 IL17DQ8TAD2 202 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 C10orf105Q8TEF2 133 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 RPL36ALQ969Q0 106 aaKnown RBP4.76□□□□□ -1.65
EWSR1-220ENST00000493426 USP9XQ93008 2570 aaPredicted RBP4.76□□□□□ -1.65
EWSR1-220ENST00000493426 MAST4O15021 2626 aa4.76□□□□□ -1.65
EWSR1-220ENST00000493426 IGHV3OR16-9A0A0B4J2B5 98 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 J3QKU1 62 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 NCR3O14931 201 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 PRB1P04280 392 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 CXCL6P80162 114 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 NTM-AS1Q6ZSK4 140 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 TMEM86BQ8N661 226 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 Q8N814 137 aa4.75□□□□□ -1.65
EWSR1-220ENST00000493426 ANKHD1Q8IWZ3 2542 aaKnown RBP4.75□□□□□ -1.65
EWSR1-220ENST00000493426 SPENQ96T58 3664 aaKnown RBP4.75□□□□□ -1.65
EWSR1-220ENST00000493426 USP9YO00507 2555 aaPredicted RBP4.74□□□□□ -1.65
EWSR1-220ENST00000493426 UTP20O75691 2785 aaKnown RBP4.74□□□□□ -1.65
EWSR1-220ENST00000493426 HECTD1Q9ULT8 2610 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 TRAV23DV6A0A075B6W5 121 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 A0A087WZ39 114 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 IGHV3-73A0A0B4J1V6 119 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 A0A0U1RRA0 63 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 IGKV3-20P01619 116 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 EDN2P20800 178 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 HILS1P60008 231 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 FP248Q71RG6 208 aaPredicted RBP4.74□□□□□ -1.65
EWSR1-220ENST00000493426 FAM19A1Q7Z5A9 133 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 C6orf223Q8N319 242 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 COL12A1Q99715 3063 aa4.74□□□□□ -1.65
EWSR1-220ENST00000493426 LINC00158P58513 81 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 NANOS2P60321 138 aaKnown RBP4.73□□□□□ -1.65
EWSR1-220ENST00000493426 BLCAPP62952 87 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 C9orf66Q5T8R8 295 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 ENHOQ6UWT2 76 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 MUC7Q8TAX7 377 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 NBASA2RRP1 2371 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 CENPEQ02224 2701 aa4.73□□□□□ -1.65
EWSR1-220ENST00000493426 Q6ZQT0 140 aa4.72□□□□□ -1.65
EWSR1-220ENST00000493426 BPESC1Q9GZL8 116 aa4.72□□□□□ -1.65
EWSR1-220ENST00000493426 SPTAN1Q13813 2472 aaKnown RBP4.71□□□□□ -1.65
EWSR1-220ENST00000493426 DOPEY1Q5JWR5 2465 aa4.71□□□□□ -1.65
EWSR1-220ENST00000493426 UNC79Q9P2D8 2635 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 A0A096LNT2 108 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 H3BUX3 64 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 INSP01308 110 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 DEFB131AP59861 70 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 COX17Q14061 63 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 UBE2E2Q96LR5 201 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 LAMTOR3Q9UHA4 124 aa4.71□□□□□ -1.66
EWSR1-220ENST00000493426 RELNP78509 3460 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms