RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 NBPF19A0A087WUL8 3843 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 APOC3P02656 99 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 TSTD1Q8NFU3 115 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 COPS9Q8WXC6 57 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 MAFIPQ8WZ33 124 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 LZICQ8WZA0 190 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 MGST2Q99735 147 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 TPT1P8Q9HAU6 139 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 NIPBLQ6KC79 2804 aaeCLIP-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 FOCADQ5VW36 1801 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 ZFHX3Q15911 3703 aa-0.74□□□□□ -2.53
SYCP1-208ENST00000493377 DSPP15924 2871 aaKnown RBP-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 TRBV7-3A0A075B6L6 115 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 IGLC7A0M8Q6 106 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 LSM10Q969L4 123 aaKnown RBP-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 SPRR2FQ96RM1 72 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 FXYD6Q9H0Q3 95 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 RERGLQ9H628 205 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 DYNLRB1Q9NP97 96 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 NSD3Q9BZ95 1437 aa-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 USP9XQ93008 2570 aaPredicted RBP-0.75□□□□□ -2.53
SYCP1-208ENST00000493377 HIST1H1DP16402 221 aaKnown RBP-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 SPRR4Q96PI1 79 aa-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 SNRNP25Q9BV90 132 aaKnown RBP-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 PAIP2BQ9ULR5 123 aaKnown RBP-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 SERP1Q9Y6X1 66 aa-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 ARHGEF12Q9NZN5 1544 aa-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 KIAA0556O60303 1618 aa-0.76□□□□□ -2.53
SYCP1-208ENST00000493377 DNAH6Q9C0G6 4158 aa-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 ARHGEF5Q12774 1597 aa-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 POLA1P09884 1462 aaPredicted RBP-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 LOC285095A0A1B0GVY8 99 aa-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 HMGN4O00479 90 aa-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 TMEM263Q8WUH6 116 aaKnown RBP-0.77□□□□□ -2.53
SYCP1-208ENST00000493377 PHLPP1O60346 1717 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 MYO18BQ8IUG5 2567 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 MUC17Q685J3 4493 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 MAGI1Q96QZ7 1491 aaPredicted RBP-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 PKHD1L1Q86WI1 4243 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 TRBV7-4A0A0J9YYF1 115 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 SFT2D2O95562 160 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 ARPC4P59998 168 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 BTG2P78543 158 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 DEFB135Q30KP9 77 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 DEFB105AQ8NG35 78 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 PDCD10Q9BUL8 212 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 SPANXDQ9BXN6 97 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 DNAH3Q8TD57 4116 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 CELSR3Q9NYQ7 3312 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 UNC13AQ9UPW8 1703 aa-0.78□□□□□ -2.53
SYCP1-208ENST00000493377 CPSF1Q10570 1443 aaKnown RBP-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 SMG6Q86US8 1419 aaKnown RBP-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 MGPP08493 103 aa-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 DEFB112Q30KQ8 113 aa-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 PPP3R2Q96LZ3 170 aa-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 PFDN5Q99471 154 aa-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 NAA60Q9H7X0 242 aa-0.79□□□□□ -2.54
SYCP1-208ENST00000493377 PAPPA2Q9BXP8 1791 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 TET3O43151 1660 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 QRICH2Q9H0J4 1663 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 LINC00959A0A1B0GUT2 108 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 SELENOWP63302 87 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 C10orf113Q5VZT2 155 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 MRPL54Q6P161 138 aaKnown RBP-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 LAMA3Q16787 3333 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 SETBP1Q9Y6X0 1596 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 TACC2O95359 2948 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 HMGXB3Q12766 1538 aa-0.8□□□□□ -2.54
SYCP1-208ENST00000493377 A0A0G2JMZ2 1700 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 FMN2Q9NZ56 1722 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 SPTBN4Q9H254 2564 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 LOC105371267A0A1B0GV96 52 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 SSSCA1O60232 199 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 TSLPQ969D9 159 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 CDC42SE2Q9NRR3 84 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 ROBO1Q9Y6N7 1651 aa-0.81□□□□□ -2.54
SYCP1-208ENST00000493377 IGLC1P0CG04 106 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 COX8AP10176 69 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 WHAMMP3Q1A5X7 153 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 Q56UQ5 140 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 COMMD6Q7Z4G1 85 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 C5orf38Q86SI9 138 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 C8orf59Q8N0T1 100 aaPredicted RBP-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 MYOZ3Q8TDC0 251 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 USMG5Q96IX5 58 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 LINC00470Q9BZP3 86 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 NXT2Q9NPJ8 142 aaKnown RBP-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 DNHD1Q96M86 4753 aa-0.82□□□□□ -2.54
SYCP1-208ENST00000493377 LAMA1P25391 3075 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 NBASA2RRP1 2371 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 NUP188Q5SRE5 1749 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 PRRC2CQ9Y520 2896 aaKnown RBP-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 MBD5Q9P267 1494 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 H0YGG7 62 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 MT1AP04731 61 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 MEIG1Q5JSS6 88 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 FAM167A-AS1Q96KT0 104 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 PKD1P98161 4303 aa-0.83□□□□□ -2.54
SYCP1-208ENST00000493377 PLECQ15149 4684 aaKnown RBP-0.83□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms