RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
LRTM1-202ENST00000493075 STPG4Q8N801 248 aa7.24□□□□□ -1.25
LRTM1-202ENST00000493075 LINC00526Q96FQ7 95 aa7.24□□□□□ -1.25
LRTM1-202ENST00000493075 SPANXA1Q9NS26 97 aa7.24□□□□□ -1.25
LRTM1-202ENST00000493075 FAT3Q8TDW7 4589 aa7.23□□□□□ -1.25
LRTM1-202ENST00000493075 IGLV4-69A0A075B6H9 119 aa7.23□□□□□ -1.25
LRTM1-202ENST00000493075 APOMO95445 188 aa7.23□□□□□ -1.25
LRTM1-202ENST00000493075 RNASE13Q5GAN3 156 aaKnown RBP7.23□□□□□ -1.25
LRTM1-202ENST00000493075 Q6ZUT4 128 aa7.23□□□□□ -1.25
LRTM1-202ENST00000493075 FAM104AQ969W3 186 aa7.23□□□□□ -1.25
LRTM1-202ENST00000493075 C2orf48Q96LS8 159 aa7.23□□□□□ -1.25
LRTM1-202ENST00000493075 MT-ND4LP03901 98 aa7.22□□□□□ -1.25
LRTM1-202ENST00000493075 RPL39P62891 51 aaKnown RBP7.22□□□□□ -1.25
LRTM1-202ENST00000493075 PRELID3AQ96N28 172 aa7.22□□□□□ -1.25
LRTM1-202ENST00000493075 LAMTOR2Q9Y2Q5 125 aa7.22□□□□□ -1.25
LRTM1-202ENST00000493075 PKHD1L1Q86WI1 4243 aa7.21□□□□□ -1.26
LRTM1-202ENST00000493075 LOC107984640A0A0U1RRK4 108 aa7.21□□□□□ -1.26
LRTM1-202ENST00000493075 F8WDY8 70 aa7.21□□□□□ -1.26
LRTM1-202ENST00000493075 RAB5AP20339 215 aa7.21□□□□□ -1.26
LRTM1-202ENST00000493075 C5orf38Q86SI9 138 aa7.21□□□□□ -1.26
LRTM1-202ENST00000493075 PYGO1Q9Y3Y4 419 aa7.21□□□□□ -1.26
LRTM1-202ENST00000493075 IGHV3OR16-9A0A0B4J2B5 98 aa7.2□□□□□ -1.26
LRTM1-202ENST00000493075 PTTG1IPP53801 180 aa7.2□□□□□ -1.26
LRTM1-202ENST00000493075 RNF151Q2KHN1 245 aa7.2□□□□□ -1.26
LRTM1-202ENST00000493075 OR10D4PQ8NGN7 298 aa7.2□□□□□ -1.26
LRTM1-202ENST00000493075 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
LRTM1-202ENST00000493075 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
LRTM1-202ENST00000493075 CLLU1Q5K131 121 aa7.19□□□□□ -1.26
LRTM1-202ENST00000493075 OPRPNQ99935 248 aaPredicted RBP7.19□□□□□ -1.26
LRTM1-202ENST00000493075 PRR3P79522 188 aaKnown RBP7.18□□□□□ -1.26
LRTM1-202ENST00000493075 IMMP2LQ96T52 175 aa7.18□□□□□ -1.26
LRTM1-202ENST00000493075 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
LRTM1-202ENST00000493075 IFITM10A6NMD0 228 aa7.17□□□□□ -1.26
LRTM1-202ENST00000493075 K7EMI3 77 aa7.17□□□□□ -1.26
LRTM1-202ENST00000493075 MT1HL1P0DM35 61 aa7.17□□□□□ -1.26
LRTM1-202ENST00000493075 SPAG11BQ08648 103 aa7.17□□□□□ -1.26
LRTM1-202ENST00000493075 GAGE2BQ13066 116 aa7.17□□□□□ -1.26
LRTM1-202ENST00000493075 Q8N8P6 123 aa7.17□□□□□ -1.26
LRTM1-202ENST00000493075 MRPL35Q9NZE8 188 aaKnown RBP7.17□□□□□ -1.26
LRTM1-202ENST00000493075 IGLV4-3A0A075B6K6 122 aa7.16□□□□□ -1.26
LRTM1-202ENST00000493075 LOC389332A0A1B0GUA5 103 aa7.16□□□□□ -1.26
LRTM1-202ENST00000493075 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.16□□□□□ -1.26
LRTM1-202ENST00000493075 UQCC3Q6UW78 93 aa7.16□□□□□ -1.26
LRTM1-202ENST00000493075 Q6ZRP5 223 aa7.16□□□□□ -1.26
LRTM1-202ENST00000493075 ORAOV1Q8WV07 137 aa7.16□□□□□ -1.26
LRTM1-202ENST00000493075 A0A087WZ39 114 aa7.15□□□□□ -1.26
LRTM1-202ENST00000493075 A0A1W2PNN7 141 aa7.15□□□□□ -1.26
LRTM1-202ENST00000493075 NPSP0C0P6 89 aa7.15□□□□□ -1.26
LRTM1-202ENST00000493075 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.26
LRTM1-202ENST00000493075 TMEM141Q96I45 108 aa7.15□□□□□ -1.26
LRTM1-202ENST00000493075 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.26
LRTM1-202ENST00000493075 TGIF2-C20orf24A0A0A6YYL0 155 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 NDUFA1O15239 70 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 SCGB1D1O95968 90 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 TLX1NBP0CAT3 122 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 SRSF9Q13242 221 aaKnown RBP eCLIP7.14□□□□□ -1.27
LRTM1-202ENST00000493075 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 LINC00242Q5T6M2 205 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 LINC01561Q8N1V8 128 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 CTDSP1Q9GZU7 261 aa7.14□□□□□ -1.27
LRTM1-202ENST00000493075 TRAV9-1A0A075B6T8 112 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 TMEM218A2RU14 115 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 G0S2P27469 103 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 C9orf116Q5BN46 136 aaPredicted RBP7.13□□□□□ -1.27
LRTM1-202ENST00000493075 C2orf66Q6UXQ4 117 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 TEX43Q6ZNM6 134 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 LINC01600Q96MT4 127 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 AMELXQ99217 191 aa7.13□□□□□ -1.27
LRTM1-202ENST00000493075 NXT2Q9NPJ8 142 aaKnown RBP7.13□□□□□ -1.27
LRTM1-202ENST00000493075 A0A0J9YXV3 536 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 IGIPA6NJ69 53 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 UBE2D1P51668 147 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
LRTM1-202ENST00000493075 KIAA0087Q14695 138 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 Q6ZN92 141 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 C2orf88Q9BSF0 95 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 VCX2Q9H322 139 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 PLA2G2DQ9UNK4 145 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
LRTM1-202ENST00000493075 IFITM2Q01629 132 aa7.11□□□□□ -1.27
LRTM1-202ENST00000493075 C10orf25Q5T742 122 aa7.11□□□□□ -1.27
LRTM1-202ENST00000493075 UNQ6190/PRO20217Q6UXQ8 127 aa7.11□□□□□ -1.27
LRTM1-202ENST00000493075 FAM19A3Q7Z5A8 133 aa7.11□□□□□ -1.27
LRTM1-202ENST00000493075 ADCYAP1P18509 176 aa7.1□□□□□ -1.27
LRTM1-202ENST00000493075 PAPPA-AS1Q5QFB9 102 aa7.1□□□□□ -1.27
LRTM1-202ENST00000493075 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
LRTM1-202ENST00000493075 LINC00173Q6ZV60 143 aa7.1□□□□□ -1.27
LRTM1-202ENST00000493075 SEC11CQ9BY50 192 aa7.1□□□□□ -1.27
LRTM1-202ENST00000493075 C6orf48Q9UBA6 75 aa7.1□□□□□ -1.27
LRTM1-202ENST00000493075 TRBV30A0A0K0K1B3 111 aa7.09□□□□□ -1.27
LRTM1-202ENST00000493075 GNB1LQ9BYB4 327 aa7.09□□□□□ -1.27
LRTM1-202ENST00000493075 SEC11AP67812 179 aa7.08□□□□□ -1.28
LRTM1-202ENST00000493075 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
LRTM1-202ENST00000493075 TIMM17AQ99595 171 aa7.08□□□□□ -1.28
LRTM1-202ENST00000493075 PSORS1C2Q9UIG4 136 aa7.08□□□□□ -1.28
LRTM1-202ENST00000493075 LINC01549A6NIU2 74 aa7.07□□□□□ -1.28
LRTM1-202ENST00000493075 MT-ND6P03923 174 aa7.07□□□□□ -1.28
LRTM1-202ENST00000493075 S100PP25815 95 aa7.07□□□□□ -1.28
LRTM1-202ENST00000493075 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
LRTM1-202ENST00000493075 KIAA1644Q3SXP7 199 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms