RNA–Protein interactions for RNA: ENST00000492602.5

SEC13-219, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, human

TSL 3

Gene SEC13, Length 393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC13-219	ENST00000492602	SYCN	Q0VAF6	134 aa		3.19	□□□□□ -1.9
SEC13-219	ENST00000492602	C1orf137	Q5JT78	98 aa		3.19	□□□□□ -1.9
SEC13-219	ENST00000492602	ALKAL2	Q6UX46	152 aa		3.19	□□□□□ -1.9
SEC13-219	ENST00000492602	CARD19	Q96LW7	228 aa		3.19	□□□□□ -1.9
SEC13-219	ENST00000492602	IMMP2L	Q96T52	175 aa		3.19	□□□□□ -1.9
SEC13-219	ENST00000492602	OSTC	Q9NRP0	149 aa		3.19	□□□□□ -1.9
SEC13-219	ENST00000492602	IGLV4-69	A0A075B6H9	119 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602		A0A096LNI7	61 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	GVQW2	A0A096LPI5	108 aa	Predicted RBP	3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	TRBV27	A0A0K0K1C4	114 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602		K7EN84	100 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	MT-ND6	P03923	174 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	CAMP	P49913	170 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	RAB14	P61106	215 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	SUMO2	P61956	95 aa	Known RBP	3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	ADIRF	Q15847	76 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	HIGD2B	Q4VC39	106 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	PAPPA-AS1	Q5QFB9	102 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	MRPL52	Q86TS9	123 aa	Known RBP	3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	CAMK2N2	Q96S95	79 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	C20orf78	Q9BR46	151 aa		3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	CSDC2	Q9Y534	153 aa	Known RBP	3.18	□□□□□ -1.9
SEC13-219	ENST00000492602	IGLV7-46	A0A075B6I9	117 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	TRAV13-1	A0A0B4J241	112 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602		H0Y9J4	135 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	PRSS2	P07478	247 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	KRTAP1-4	P0C5Y4	121 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	RAB4A	P20338	218 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	FOXI1	Q12951	378 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	GAGE2B	Q13066	116 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602		Q6ZN92	141 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	LINC01551	Q86U37	167 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	RPL39L	Q96EH5	51 aa	Known RBP	3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	CDC42SE2	Q9NRR3	84 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602	NAT8	Q9UHE5	227 aa		3.17	□□□□□ -1.9
SEC13-219	ENST00000492602		M0R2T5	61 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	POLR2K	P53803	58 aa	Known RBP	3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	HBB	P68871	147 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	RNF151	Q2KHN1	245 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	ASB16-AS1	Q495Z4	193 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	FAM104B	Q5XKR9	115 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	AMN1	Q8IY45	258 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	NUP35	Q8NFH5	326 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	OR10D4P	Q8NGN7	298 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	C2orf48	Q96LS8	159 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	C2orf88	Q9BSF0	95 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	TIMM21	Q9BVV7	248 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	SPANXA1	Q9NS26	97 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	TMEM242	Q9NWH2	141 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	NEB	P20929	6669 aa		3.16	□□□□□ -1.9
SEC13-219	ENST00000492602	NDUFA1	O15239	70 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	TSHB	P01222	138 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	MT-ND4L	P03901	98 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	IGLV7-43	P04211	117 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	ESD	P10768	282 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	IFI27	P40305	119 aa	Predicted RBP	3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	SEC11A	P67812	179 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	RPL18A	Q02543	176 aa	Known RBP	3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	ORMDL3	Q8N138	153 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	C15orf56	Q8N910	161 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	PACRG	Q96M98	296 aa	Predicted RBP	3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	VCX2	Q9H322	139 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	LAMTOR2	Q9Y2Q5	125 aa		3.15	□□□□□ -1.91
SEC13-219	ENST00000492602	TRBV24-1	A0A075B6N3	115 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602		A0A087WZ39	114 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	SMIM27	A0A1W2PRY6	76 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	LINC01549	A6NIU2	74 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	IFITM10	A6NMD0	228 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	TNFRSF6B	O95407	300 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	SRP19	P09132	144 aa	Known RBP	3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	PTTG1IP	P53801	180 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	CKS1B	P61024	79 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	RPL32	P62910	135 aa	Known RBP	3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	C6orf226	Q5I0X4	101 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	TEX43	Q6ZNM6	134 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	TMEM136	Q6ZRR5	245 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	ATP5L2	Q7Z4Y8	100 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	C5orf38	Q86SI9	138 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602	MAP1LC3A	Q9H492	121 aa		3.14	□□□□□ -1.91
SEC13-219	ENST00000492602		K7EMI3	77 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	RPL23	P62829	140 aa	Known RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	UBE2B	P63146	152 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	MRPS36	P82909	103 aa	Known RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	SPAG11B	Q08648	103 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	PNRC1	Q12796	327 aa	Predicted RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	KRTAP19-2	Q3LHN2	52 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	MRPL51	Q4U2R6	128 aa	Known RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	ORMDL2	Q53FV1	153 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	LBH	Q53QV2	105 aa	Predicted RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	MRPL54	Q6P161	138 aa	Known RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	KRTAP19-1	Q8IUB9	90 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	ORAOV1	Q8WV07	137 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	LINC00526	Q96FQ7	95 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	TMEM141	Q96I45	108 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	PRELID3A	Q96N28	172 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	PPDPF	Q9H3Y8	114 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	CARHSP1	Q9Y2V2	147 aa	Known RBP	3.13	□□□□□ -1.91
SEC13-219	ENST00000492602	UBE2D4	Q9Y2X8	147 aa		3.13	□□□□□ -1.91
SEC13-219	ENST00000492602		V9GYV3	84 aa		3.13	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms