RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 FAM30AQ9NZY2 134 aa7.3□□□□□ -1.24
TMEM39A-211ENST00000491685 UBE2D4Q9Y2X8 147 aa7.3□□□□□ -1.24
TMEM39A-211ENST00000491685 C2orf66Q6UXQ4 117 aa7.29□□□□□ -1.24
TMEM39A-211ENST00000491685 HIST3H2BBQ8N257 126 aa7.29□□□□□ -1.24
TMEM39A-211ENST00000491685 TOMM6Q96B49 74 aa7.29□□□□□ -1.24
TMEM39A-211ENST00000491685 URB1-AS1Q96HZ7 61 aa7.29□□□□□ -1.24
TMEM39A-211ENST00000491685 TMEM141Q96I45 108 aa7.29□□□□□ -1.24
TMEM39A-211ENST00000491685 TIMM17AQ99595 171 aa7.29□□□□□ -1.24
TMEM39A-211ENST00000491685 IGKV3OR2-268A0A0C4DH90 116 aa7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 LEPROTL1O95214 131 aa7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 SNRPEP62304 92 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 MRPS36P82909 103 aaKnown RBP7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 CFAP161Q6P656 301 aa7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 ERASQ7Z444 233 aa7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 VCX2Q9H322 139 aa7.28□□□□□ -1.24
TMEM39A-211ENST00000491685 LINC00310P59036 64 aa7.27□□□□□ -1.25
TMEM39A-211ENST00000491685 RPL39P62891 51 aaKnown RBP7.27□□□□□ -1.25
TMEM39A-211ENST00000491685 PDZD11Q5EBL8 140 aa7.27□□□□□ -1.25
TMEM39A-211ENST00000491685 CLPSL2Q6UWE3 100 aa7.27□□□□□ -1.25
TMEM39A-211ENST00000491685 SCGB3A1Q96QR1 104 aa7.27□□□□□ -1.25
TMEM39A-211ENST00000491685 LINC00959A0A1B0GUT2 108 aa7.26□□□□□ -1.25
TMEM39A-211ENST00000491685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.26□□□□□ -1.25
TMEM39A-211ENST00000491685 LECT2O14960 151 aa7.26□□□□□ -1.25
TMEM39A-211ENST00000491685 C14orf177Q52M58 125 aa7.26□□□□□ -1.25
TMEM39A-211ENST00000491685 TEX43Q6ZNM6 134 aa7.26□□□□□ -1.25
TMEM39A-211ENST00000491685 C2orf88Q9BSF0 95 aa7.26□□□□□ -1.25
TMEM39A-211ENST00000491685 IGLV10-54A0A075B6I4 117 aa7.25□□□□□ -1.25
TMEM39A-211ENST00000491685 HIST1H2BLQ99880 126 aa7.25□□□□□ -1.25
TMEM39A-211ENST00000491685 MAP1LC3CQ9BXW4 147 aa7.25□□□□□ -1.25
TMEM39A-211ENST00000491685 TMA7Q9Y2S6 64 aaKnown RBP7.25□□□□□ -1.25
TMEM39A-211ENST00000491685 A0A096LNJ9 63 aa7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 TRAV13-1A0A0B4J241 112 aa7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 TRAV12-1A0A0B4J245 112 aa7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 IGIPA6NJ69 53 aa7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 PLA2G1BP04054 148 aaKnown RBP7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 SEC11AP67812 179 aa7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 BAALCQ8WXS3 180 aa7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 CHCHD10Q8WYQ3 142 aaPredicted RBP7.24□□□□□ -1.25
TMEM39A-211ENST00000491685 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 GAGE12HA6NDE8 117 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 NUPR1O60356 82 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 LINC01620Q4KN68 170 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 CD164L2Q6UWJ8 174 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 PET117Q6UWS5 81 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 IFI27L1Q96BM0 104 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 HMCN2Q8NDA2 5059 aa7.23□□□□□ -1.25
TMEM39A-211ENST00000491685 IGLV4-3A0A075B6K6 122 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 C20orf202A1L168 122 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 IFITM10A6NMD0 228 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 J3QL48 77 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 APOMO95445 188 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 MALP21145 153 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 XCL1P47992 114 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 Q6ZSA8 131 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 Q6ZUT4 128 aa7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 OPRPNQ99935 248 aaPredicted RBP7.22□□□□□ -1.25
TMEM39A-211ENST00000491685 PRSS1P07477 247 aa7.21□□□□□ -1.26
TMEM39A-211ENST00000491685 FABP4P15090 132 aa7.21□□□□□ -1.26
TMEM39A-211ENST00000491685 RNASE13Q5GAN3 156 aaKnown RBP7.21□□□□□ -1.26
TMEM39A-211ENST00000491685 FAM19A2Q8N3H0 131 aa7.21□□□□□ -1.26
TMEM39A-211ENST00000491685 PMVKQ15126 192 aa7.2□□□□□ -1.26
TMEM39A-211ENST00000491685 PMCHL1Q16048 86 aa7.2□□□□□ -1.26
TMEM39A-211ENST00000491685 FAM19A3Q7Z5A8 133 aa7.2□□□□□ -1.26
TMEM39A-211ENST00000491685 AMELXQ99217 191 aa7.2□□□□□ -1.26
TMEM39A-211ENST00000491685 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
TMEM39A-211ENST00000491685 IGHV1-58A0A0C4DH39 117 aa7.19□□□□□ -1.26
TMEM39A-211ENST00000491685 SYS1-DBNDD2H3BUS1 97 aa7.19□□□□□ -1.26
TMEM39A-211ENST00000491685 COX7A2LO14548 114 aa7.19□□□□□ -1.26
TMEM39A-211ENST00000491685 PLNP26678 52 aa7.19□□□□□ -1.26
TMEM39A-211ENST00000491685 LINC00528Q8N1L1 170 aa7.19□□□□□ -1.26
TMEM39A-211ENST00000491685 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 USP17L23D6RBM5 183 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 ZNF561-AS1K7EIQ3 104 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 HERVK_113P63121 156 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 FOXI1Q12951 378 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 JOSD1Q15040 202 aaPredicted RBP7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 LINC01545Q5VT33 79 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 SCXQ7RTU7 201 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 CST9LQ9H4G1 147 aa7.18□□□□□ -1.26
TMEM39A-211ENST00000491685 hDV102S1A0JD36 115 aa7.17□□□□□ -1.26
TMEM39A-211ENST00000491685 C3orf79P0CE67 100 aa7.17□□□□□ -1.26
TMEM39A-211ENST00000491685 UBE2D1P51668 147 aa7.17□□□□□ -1.26
TMEM39A-211ENST00000491685 SERTAD4-AS1Q5TG53 156 aa7.17□□□□□ -1.26
TMEM39A-211ENST00000491685 OR10D4PQ8NGN7 298 aa7.17□□□□□ -1.26
TMEM39A-211ENST00000491685 KRTAP29-1A8MX34 341 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 F8VRH5 84 aa7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 SMIM6P0DI80 62 aa7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 C5orf38Q86SI9 138 aa7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 FAM104AQ969W3 186 aa7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 LRP1Q07954 4544 aaKnown RBP7.16□□□□□ -1.26
TMEM39A-211ENST00000491685 LOC105371267A0A1B0GV96 52 aa7.15□□□□□ -1.26
TMEM39A-211ENST00000491685 TINCRA0A1B0GVN0 87 aa7.15□□□□□ -1.26
TMEM39A-211ENST00000491685 F8WDY8 70 aa7.15□□□□□ -1.26
TMEM39A-211ENST00000491685 KRTDAPP60985 99 aa7.15□□□□□ -1.26
TMEM39A-211ENST00000491685 IGHV3OR16-9A0A0B4J2B5 98 aa7.14□□□□□ -1.27
TMEM39A-211ENST00000491685 H3BRM9 83 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms