RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 IFI27P40305 119 aaPredicted RBP7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 ODF1Q14990 250 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 ZNF56Q15929 161 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 NEXN-AS1Q8NBZ9 246 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 SMIM2Q9BVW6 85 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 NXT2Q9NPJ8 142 aaKnown RBP7.02□□□□□ -1.29
CLCNKA-206ENST00000491433 LOC105371267A0A1B0GV96 52 aa7.01□□□□□ -1.29
CLCNKA-206ENST00000491433 S100A6P06703 90 aa7.01□□□□□ -1.29
CLCNKA-206ENST00000491433 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
CLCNKA-206ENST00000491433 BAGE3Q86Y29 109 aa7.01□□□□□ -1.29
CLCNKA-206ENST00000491433 LINC00269Q8N2A0 174 aa7.01□□□□□ -1.29
CLCNKA-206ENST00000491433 TRBV25-1A0A075B6N4 114 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 A0A096LNJ9 63 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 SDHAF1A6NFY7 115 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 VCYO14598 125 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 CHTF8P0CG12 524 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 PMCHP20382 165 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 RBX1P62877 108 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 KRTAP26-1Q6PEX3 210 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 PRSS3P2Q8NHM4 247 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 ST20Q9HBF5 79 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 PKIGQ9Y2B9 76 aa7□□□□□ -1.29
CLCNKA-206ENST00000491433 REG3AQ06141 175 aa6.99□□□□□ -1.29
CLCNKA-206ENST00000491433 CFAP161Q6P656 301 aa6.99□□□□□ -1.29
CLCNKA-206ENST00000491433 CLPSL2Q6UWE3 100 aa6.99□□□□□ -1.29
CLCNKA-206ENST00000491433 IGLV10-54A0A075B6I4 117 aa6.98□□□□□ -1.29
CLCNKA-206ENST00000491433 LOC389332A0A1B0GUA5 103 aa6.98□□□□□ -1.29
CLCNKA-206ENST00000491433 MAJINQ3KP22 176 aa6.98□□□□□ -1.29
CLCNKA-206ENST00000491433 HIST1H2BLQ99880 126 aa6.98□□□□□ -1.29
CLCNKA-206ENST00000491433 LPAP08519 4548 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 IGHV1-24A0A0C4DH33 117 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 I3L3M4 83 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 TCAPO15273 167 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 TSHBP01222 138 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 FCER1GP30273 86 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 GAGE6Q13070 117 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 PDZD11Q5EBL8 140 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 STPG4Q8N801 248 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 LINC00474Q9P2X8 69 aa6.97□□□□□ -1.29
CLCNKA-206ENST00000491433 HSBP1O75506 76 aa6.96□□□□□ -1.3
CLCNKA-206ENST00000491433 COX6A2Q02221 97 aa6.96□□□□□ -1.3
CLCNKA-206ENST00000491433 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
CLCNKA-206ENST00000491433 FAM19A2Q8N3H0 131 aa6.96□□□□□ -1.3
CLCNKA-206ENST00000491433 A0A1B0GUV1 79 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 SLPIP03973 132 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 ORMDL2Q53FV1 153 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 RNASEKQ6P5S7 137 aaKnown RBP6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 Q6ZRP5 223 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 NTM-AS1Q6ZSK4 140 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 TMEM18Q96B42 140 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
CLCNKA-206ENST00000491433 IGKV2-24A0A0C4DH68 120 aa6.94□□□□□ -1.3
CLCNKA-206ENST00000491433 LINC01549A6NIU2 74 aa6.94□□□□□ -1.3
CLCNKA-206ENST00000491433 TOMM6Q96B49 74 aa6.94□□□□□ -1.3
CLCNKA-206ENST00000491433 HBDP02042 147 aa6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 G0S2P27469 103 aa6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 AMTP48728 403 aa6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 SRSF9Q13242 221 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 C20orf203Q8NBC4 194 aa6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 FAM104AQ969W3 186 aa6.93□□□□□ -1.3
CLCNKA-206ENST00000491433 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
CLCNKA-206ENST00000491433 FABP4P15090 132 aa6.92□□□□□ -1.3
CLCNKA-206ENST00000491433 S100A2P29034 98 aa6.92□□□□□ -1.3
CLCNKA-206ENST00000491433 PMCHL1Q16048 86 aa6.92□□□□□ -1.3
CLCNKA-206ENST00000491433 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
CLCNKA-206ENST00000491433 H7C423 109 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 UBE2L6O14933 153 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 LEPROTL1O95214 131 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 NPSP0C0P6 89 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 C2orf66Q6UXQ4 117 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 TMEM243Q9BU79 118 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 TIMM21Q9BVV7 248 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 PSORS1C2Q9UIG4 136 aa6.91□□□□□ -1.3
CLCNKA-206ENST00000491433 COTL1Q14019 142 aa6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 ERASQ7Z444 233 aa6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 MRPL52Q86TS9 123 aaKnown RBP6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 C15orf56Q8N910 161 aa6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 TIMM17AQ99595 171 aa6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 CYSLTR1Q9Y271 337 aa6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
CLCNKA-206ENST00000491433 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.89□□□□□ -1.31
CLCNKA-206ENST00000491433 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
CLCNKA-206ENST00000491433 JOSD1Q15040 202 aaPredicted RBP6.89□□□□□ -1.31
CLCNKA-206ENST00000491433 HSPB8Q9UJY1 196 aa6.89□□□□□ -1.31
CLCNKA-206ENST00000491433 IGLV4-60A0A075B6I1 120 aa6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 A0A096LNI7 61 aa6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 GAGE12HA6NDE8 117 aa6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 ATP5LO75964 103 aa6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 RPL39P62891 51 aaKnown RBP6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 TMEM141Q96I45 108 aa6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 UBE2D4Q9Y2X8 147 aa6.88□□□□□ -1.31
CLCNKA-206ENST00000491433 GVQW2A0A096LPI5 108 aaPredicted RBP6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 SYS1-DBNDD2H3BUS1 97 aa6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 MRPS36P82909 103 aaKnown RBP6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 HIGD2BQ4VC39 106 aa6.87□□□□□ -1.31
CLCNKA-206ENST00000491433 PYY3Q5JQD4 70 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms