RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 PRSS3P2Q8NHM4 247 aa5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 TMEM18Q96B42 140 aa5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 PACRGQ96M98 296 aaPredicted RBP5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 ALKBH7Q9BT30 221 aaPredicted RBP5.28□□□□□ -1.56
APOBEC3F-204ENST00000491387 H7C423 109 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 NUPR1O60356 82 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 SERF1AO75920 110 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 FGF6P10767 208 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 RAB4AP20338 218 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 LINC00310P59036 64 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 SRSF9Q13242 221 aaKnown RBP eCLIP5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 RNASE13Q5GAN3 156 aaKnown RBP5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 C18orf32Q8TCD1 76 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 CHCHD10Q8WYQ3 142 aaPredicted RBP5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 C12orf57Q99622 126 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 LINC00474Q9P2X8 69 aa5.27□□□□□ -1.57
APOBEC3F-204ENST00000491387 FOXI1Q12951 378 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 ODF1Q14990 250 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 MAJINQ3KP22 176 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 FAM104BQ5XKR9 115 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 STPG4Q8N801 248 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 NRACQ8N912 160 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 TMEM191AQ9H0A3 160 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 PKIGQ9Y2B9 76 aa5.26□□□□□ -1.57
APOBEC3F-204ENST00000491387 A0A096LNI7 61 aa5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 TRBV6-5A0A0K0K1A5 114 aa5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 PMCHP20382 165 aa5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 POLR2KP53803 58 aaKnown RBP5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 MRPL51Q4U2R6 128 aaKnown RBP5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 REG3GQ6UW15 175 aa5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 SMIM15Q7Z3B0 74 aa5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 LPAP08519 4548 aa5.25□□□□□ -1.57
APOBEC3F-204ENST00000491387 IGKV2-24A0A0C4DH68 120 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 LINC00959A0A1B0GUT2 108 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 D6R8Y8 96 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 I3L3M4 83 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 CCL25O15444 150 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 XCL1P47992 114 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 PYY3Q5JQD4 70 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 AMMECR1LQ6DCA0 310 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 ORMDL3Q8N138 153 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 CHCHD1Q96BP2 118 aaKnown RBP5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 ST20Q9HBF5 79 aa5.24□□□□□ -1.57
APOBEC3F-204ENST00000491387 HSBP1O75506 76 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 PPBPP02775 128 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 ZNF25P17030 456 aaPredicted RBP5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 CKS2P33552 79 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 JOSD1Q15040 202 aaPredicted RBP5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 Q6ZRP5 223 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 Q6ZUT4 128 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 OR5A1Q8NGJ0 315 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 FAM104AQ969W3 186 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 PRELID3AQ96N28 172 aa5.23□□□□□ -1.57
APOBEC3F-204ENST00000491387 IGHV1-58A0A0C4DH39 117 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 TRBV27A0A0K0K1C4 114 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 LINC00614P0C842 121 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 RPL39P62891 51 aaKnown RBP5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 MRAP2Q96G30 205 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 URB1-AS1Q96HZ7 61 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 CDC42SE2Q9NRR3 84 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 LAMTOR2Q9Y2Q5 125 aa5.22□□□□□ -1.57
APOBEC3F-204ENST00000491387 FA2HQ7L5A8 372 aa5.21□□□□□ -1.58
APOBEC3F-204ENST00000491387 FAM19A2Q8N3H0 131 aa5.21□□□□□ -1.58
APOBEC3F-204ENST00000491387 CARD19Q96LW7 228 aa5.21□□□□□ -1.58
APOBEC3F-204ENST00000491387 OPRPNQ99935 248 aaPredicted RBP5.21□□□□□ -1.58
APOBEC3F-204ENST00000491387 MAP1LC3AQ9H492 121 aa5.21□□□□□ -1.58
APOBEC3F-204ENST00000491387 UBE2D4Q9Y2X8 147 aa5.21□□□□□ -1.58
APOBEC3F-204ENST00000491387 LOC389332A0A1B0GUA5 103 aa5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 TNFRSF6BO95407 300 aa5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 NPYP01303 97 aa5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 IFI27P40305 119 aaPredicted RBP5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 PTTG1IPP53801 180 aa5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 SUMO2P61956 95 aaKnown RBP5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 CD164L2Q6UWJ8 174 aa5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 MRPL52Q86TS9 123 aaKnown RBP5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 ZNF664Q8N3J9 261 aa5.2□□□□□ -1.58
APOBEC3F-204ENST00000491387 TCAPO15273 167 aa5.19□□□□□ -1.58
APOBEC3F-204ENST00000491387 SCGB1D1O95968 90 aa5.19□□□□□ -1.58
APOBEC3F-204ENST00000491387 KRTDAPP60985 99 aa5.19□□□□□ -1.58
APOBEC3F-204ENST00000491387 SYCNQ0VAF6 134 aa5.19□□□□□ -1.58
APOBEC3F-204ENST00000491387 TMEM101Q96IK0 257 aa5.19□□□□□ -1.58
APOBEC3F-204ENST00000491387 NXT2Q9NPJ8 142 aaKnown RBP5.19□□□□□ -1.58
APOBEC3F-204ENST00000491387 IGLV4-69A0A075B6H9 119 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 TRAV13-1A0A0B4J241 112 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 LOC107984640A0A0U1RRK4 108 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 PRSS47A8MTI9 375 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 C3orf79P0CE67 100 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 FCER1GP30273 86 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 S100A12P80511 92 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 PMCHL1Q16048 86 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 ZC2HC1BQ5TFG8 222 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 C5orf38Q86SI9 138 aa5.18□□□□□ -1.58
APOBEC3F-204ENST00000491387 LINC01546A6NGU7 62 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 PCP4L1A6NKN8 68 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 ZNF561-AS1K7EIQ3 104 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 VCYO14598 125 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 PPP1R17O96001 155 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 SS18Q15532 418 aa5.17□□□□□ -1.58
APOBEC3F-204ENST00000491387 Q8N8P6 123 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms