RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 TSHBP01222 138 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 ESDP10768 282 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 CKS2P33552 79 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 POLR2KP53803 58 aaKnown RBP4.47□□□□□ -1.69
COL9A1-209ENST00000489861 RPL23P62829 140 aaKnown RBP4.47□□□□□ -1.69
COL9A1-209ENST00000489861 RPL32P62910 135 aaKnown RBP4.47□□□□□ -1.69
COL9A1-209ENST00000489861 HBBP68871 147 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 COX6A2Q02221 97 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 HIGD2BQ4VC39 106 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 CD164L2Q6UWJ8 174 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 Q6ZRP5 223 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 AMN1Q8IY45 258 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 ZNF664Q8N3J9 261 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 C15orf56Q8N910 161 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 NUP35Q8NFH5 326 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 TIMM21Q9BVV7 248 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 TMEM242Q9NWH2 141 aa4.47□□□□□ -1.69
COL9A1-209ENST00000489861 LOC107984640A0A0U1RRK4 108 aa4.46□□□□□ -1.7
COL9A1-209ENST00000489861 XCL1P47992 114 aa4.46□□□□□ -1.7
COL9A1-209ENST00000489861 PNRC1Q12796 327 aaPredicted RBP4.46□□□□□ -1.7
COL9A1-209ENST00000489861 FAM104BQ5XKR9 115 aa4.46□□□□□ -1.7
COL9A1-209ENST00000489861 ATP5L2Q7Z4Y8 100 aa4.46□□□□□ -1.7
COL9A1-209ENST00000489861 CDC42SE2Q9NRR3 84 aa4.46□□□□□ -1.7
COL9A1-209ENST00000489861 IGLV4-69A0A075B6H9 119 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 TRBV24-1A0A075B6N3 115 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 COX7A2LO14548 114 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 RAB5AP20339 215 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 G0S2P27469 103 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 CAMPP49913 170 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 SYCNQ0VAF6 134 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 FOXI1Q12951 378 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 SPANXA1Q9NS26 97 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 LAMTOR2Q9Y2Q5 125 aa4.45□□□□□ -1.7
COL9A1-209ENST00000489861 MT-ND4LP03901 98 aa4.44□□□□□ -1.7
COL9A1-209ENST00000489861 MRPL51Q4U2R6 128 aaKnown RBP4.44□□□□□ -1.7
COL9A1-209ENST00000489861 ORMDL3Q8N138 153 aa4.44□□□□□ -1.7
COL9A1-209ENST00000489861 PRR26Q8N8Z3 221 aa4.44□□□□□ -1.7
COL9A1-209ENST00000489861 PRSS3P2Q8NHM4 247 aa4.44□□□□□ -1.7
COL9A1-209ENST00000489861 C2orf48Q96LS8 159 aa4.44□□□□□ -1.7
COL9A1-209ENST00000489861 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 K7EMI3 77 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 TNFRSF6BO95407 300 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 SLPIP03973 132 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 IFI27P40305 119 aaPredicted RBP4.43□□□□□ -1.7
COL9A1-209ENST00000489861 LINC01547P58512 204 aaPredicted RBP4.43□□□□□ -1.7
COL9A1-209ENST00000489861 NRACQ8N912 160 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 OR10D4PQ8NGN7 298 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 CAMK2N2Q96S95 79 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 IMMP2LQ96T52 175 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 SMIM2Q9BVW6 85 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 PSORS1C2Q9UIG4 136 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 UBE2D4Q9Y2X8 147 aa4.43□□□□□ -1.7
COL9A1-209ENST00000489861 A0A096LNI7 61 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 TGIF2-C20orf24A0A0A6YYL0 155 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 D6R8Y8 96 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 PTTG1IPP53801 180 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 MRPS36P82909 103 aaKnown RBP4.42□□□□□ -1.7
COL9A1-209ENST00000489861 RNF151Q2KHN1 245 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 Q6ZN92 141 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 MAP1LC3AQ9H492 121 aa4.42□□□□□ -1.7
COL9A1-209ENST00000489861 TRAV13-1A0A0B4J241 112 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 A0A1B0GXF2 115 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 LINC01549A6NIU2 74 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 SMKR1H3BMG3 65 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 MT-ND6P03923 174 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 NPSP0C0P6 89 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 GAGE2BQ13066 116 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 PAPPA-AS1Q5QFB9 102 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 MRPL54Q6P161 138 aaKnown RBP4.41□□□□□ -1.7
COL9A1-209ENST00000489861 TMEM136Q6ZRR5 245 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 PRELID3AQ96N28 172 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 C2orf88Q9BSF0 95 aa4.41□□□□□ -1.7
COL9A1-209ENST00000489861 A0A1B0GVG6 124 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 IFITM10A6NMD0 228 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 NDUFA1O15239 70 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 SEC11AP67812 179 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 RPL18AQ02543 176 aaKnown RBP4.4□□□□□ -1.71
COL9A1-209ENST00000489861 SPAG11BQ08648 103 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 ORMDL2Q53FV1 153 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 DIRC1Q969H9 104 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 MRPL35Q9NZE8 188 aaKnown RBP4.4□□□□□ -1.71
COL9A1-209ENST00000489861 PYGO1Q9Y3Y4 419 aa4.4□□□□□ -1.71
COL9A1-209ENST00000489861 PRSS47A8MTI9 375 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 C9JQL5 133 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 H3BS24 57 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 UQCC3Q6UW78 93 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 TEX43Q6ZNM6 134 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 Q6ZUT4 128 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 C5orf38Q86SI9 138 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 LINC01561Q8N1V8 128 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 TMEM141Q96I45 108 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 CTDSP1Q9GZU7 261 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 NXT2Q9NPJ8 142 aaKnown RBP4.39□□□□□ -1.71
COL9A1-209ENST00000489861 CYSLTR1Q9Y271 337 aa4.39□□□□□ -1.71
COL9A1-209ENST00000489861 FCGBPQ9Y6R7 5405 aaPredicted RBP4.38□□□□□ -1.71
COL9A1-209ENST00000489861 TRAV9-1A0A075B6T8 112 aa4.38□□□□□ -1.71
COL9A1-209ENST00000489861 NPYP01303 97 aa4.38□□□□□ -1.71
COL9A1-209ENST00000489861 S100PP25815 95 aa4.38□□□□□ -1.71
COL9A1-209ENST00000489861 COX19Q49B96 90 aa4.38□□□□□ -1.71
COL9A1-209ENST00000489861 ORAOV1Q8WV07 137 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms